TCONS_00069669 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069669
Unique NameTCONS_00069669
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2695

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069669 ID=TCONS_00069669|Name=TCONS_00069669|organism=Clytia hemisphaerica|type=transcript|length=2695bp
gtgaaaaaaataaaatcacacATGGAAGAACAGGAGTTTGGTGGAGGGAA
TTTCAAATTATTCTACCCTACACAGCCCTTGTCTGATATCATGAATAAca
atgaaattcaacaaaatttGTCGAAGGAGGATTCCTTCAAATTCACCATG
ACGCAACTTCAACAACGTCATCCGTCCGTCACTAAACCGTTCCAAGAAGA
ATTCGTCGACGTTAACATCAAAAATGGATTCTTCGACGCTGCCAACAAAA
TGAGACGACAagGTGTTTTGACAGACGTATCGCTAGTTGTTGATCAACAA
ACCTTTCACACTCATAAACTGATATTATGTTCATGCAGTGATTATTTTAC
TAGCATGTTTAACGGTCCTTTGGCGCATCACGGCCAACAAGTCTTCATAT
CGGGCGTCAGTGCCCAAAGCATGGAAGCTATTTTGAATTACGTTTATACG
GGATCGATTATCATCAACGAGGAGTTTATACAAGACATTTTAGAAGCAGC
TtgtttgtttctattgaaaaactTACGCGAACGATGCGCGCGATTTCTGC
GCGACCGATTAGATGGTGGCAATTGTTTACAGATTTTCAGTATCGCTAAA
AGTTGTTCATTGTTGGCTTTGATGGAGGATTCCCTAGAGTTCATCTCCGC
GATCTTTCAAGATATTTCAGCGCTGAATGATTTTAAACAATTAAGTTTTG
ATGAACTTATTGATGTATTATCTCTTGAAGATTTAGCAGTGCCAAGTGAA
GATTACGTTTTAGAGGCAGCATTTCGATGGTTAAATCATGATTTATAcgg
acgtcagcaaaaatttgtaGAAGTGCTAAAAGCTATACATTTACCATACG
TTAGTGACGATATGTTAAAACAGGTCATGGAGAATGAAAAATCTTTACGT
ACTTTTCCTGAGCTGGAAATTCTCTTCCGTTCCGCCTTACGTCTTACCGT
TGAAAACTGGACTCTCTCCAAAGACAGTGATTTTAATTTACTCCAACCAA
AATCATGGATAAATCCACGAAAATGTATTCAATGTATACCGAGTCTTATC
GCTATGGGTGGGCCTACATTGAACTTATTTAACAGCGAACTTGGAAAATG
GTGTGAAATAACGAAATGTAAACCACGGCATTGTCCAGGTATGGATGTTG
TTGGGTCCACTATCTATGTTGTAGGTGGTTCACTGGAATGGAAACGAAAA
CGTACTGGAGAGTATTACAACACTGAGAAAAATGAATGGATCCCAATGGC
GGATATGCACACACCACGAAGTAATTTCGGTCTCGTCAATTTGGAAGGGA
AACTGTATGCTATCGGTGGTTATGATGGGAATTTCCCTTTAAAATCAGCA
GAGGTTTATGATCCACGTACCAACCAATGGACGCAAATCTCCGACATGAC
GACGGCAAGAGACGGCGCATGTAATGTGTCGGACGGCGAATCGATTTACG
TGATTGGAGGATACGACGGCCACGAATACAGACTGACGACAGAAGTTTAT
AAACCAGAAACTGGTCTATGGGATATCAGTTCTATTCCAGAGACATCAGT
GCAACGTCAGAACGCGATGTGTGTATACTTTGATTCGAGTATTTACATTA
TTGGTGGTTACCATGGAGATACTTATCATTCATCGATGGAAGTATTAGAC
CTGGAAACGAACGAATGGTCTTTTTCAAGCCCCTTAAGTGCACCAAGACA
TCACGCAGGCGCCGCTGCCATGAATGGAAACATTTACATTTGTGGTGGTT
GGAGTGCACATATTCCCGTCAGCCACGTTGACGTCTACTCTATCGCTCAA
GATACGTGGCGTCGCGTTTCGCCTCTTCCCACACCAACAATGATTCGCTC
AGTAGCGGTTAACTTCCCACGAAAATGCATCTTGAATTTATTCGCTAACT
CAAACAGTGATATGGCGGCTTATCGTGCGTCAAGAATACGCTCCTTGCGT
TCCATCTCGGAGTCATCTTCTTCAGGTAATGAGAAAACACAAACAGAAGC
TGAAGCTTTTTTGACTTCCTCGACTGATGAGTAGAATCTTGATTTTGTGT
TAATATTTATTTCATGCTTTGAGTATATATTACCCTTTCTAATCGGTCTC
TTGAATCAAGAAACTTGATGAAGCTTGGCAAAGTAAGTCTCTCAGTTCGc
ccatttttttaacaatataGTGTAGCACCTAATATGGATACCATACTAGC
AAATAGCACGAAATCATTAACTACCCAACAAGCAGTTTTAAGGTGCGTTT
GAAAAATGTCTTGGGTAAAAAGCTTCGAGGGATCTTATAACATTTATATT
TCTTATGAACTTTCATTTTGTATTGTATATAATTTATTAAAATTGAAACG
TTTTTATAcaattaacatattttgaagtttaattttcttcaattttcgtT
TTTGTAAATACGATACCAAAAGTATCAGGgacaaatttcatttttggtgA
CAACTTTTATGAAGATTCTCCTGCATCGCCTGTTTTGTTTCTAGATGATC
TTCAAAATGACAAAGCTCTTCTATAGCCGACCATTGTCCCCCCACCTCCA
AAgcaaattttcccaaaaattagtGTCTTTTCATTCCCTTTGCTTTTTTG
TATTAATTTTTTGCCTTTTGTAAAATAGAATATGATGAATATATTTTGTG
TTACTTGATATTCAAATAAGATTGACAGTATTAACTACTAAAGAA
Run BLAST on NCBI

transcript from alignment at scaffold_505:33964..54219+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069669 ID=TCONS_00069669|Name=TCONS_00069669|organism=Clytia hemisphaerica|type=transcript|length=20256bp|location=Sequence derived from alignment at scaffold_505:33964..54219+ (Clytia hemisphaerica)
gtgaaaaaaataaaatcacacATGGAAGAACAGGAGTTTGGTGGAGGGAA
TTTCAAATTATTCTACCCTACACAGCCCTTGTCTGATATCATGAATAAca
atgaaattcaacaaaatttgtaAGAATTTACACTTATCCATCTTCTCGTA
TTCAAATTGCAGGGTTTTtcagaaaacaatggaaaacttGTGTTATAAAT
TGCGTTTAAGTGCGTTTATAAGTGCGTATAAGTGTGCCTAATACCTTTTT
ACTTTCCCAGTGAGTACATTCAAAGCGCTCCATTTCTCTTTTTTGCGTTA
TATACATTTTATATGTGAATATCCAAAACAATTAAGTTAAAATATCTTTG
AATGAAGGCTTAATCTCAGAAAAGATCTCAATGCAAGTAGCCACTTTGGT
GGCAATAAATCTAGCAAATAGCTTGAATTTCAAGTGGTAAAGTTTGGTGG
TTATCGCAATTATTTTGTTAGAAATTTTTATACTAAACCCTTTCCAAACA
AGGGGAATACTATACAATCAataggattttttttggaatagtaATCCCAT
aagttttgacaaaatttcAGAAGAAGATCTCTTTAGTTGGCAGAGTGCTC
AATGCTATCATGGGTGCACCATTGTGTTCTATTCTGAACTCTATGAGAGG
ATTTATCTTCAATATAGGCCACTCAGTTTTGGGAGAGTACTTAAGAAAAT
GGTGCTTTCAAGAAACTGCCTTAAAAAGTTACAAGTGTTAAAGAAGTTGA
TATAAAGCTTGTATAATCAATAGAAAATAAACACTGTAAAACTTCTGCCC
TTGAATTTGAATGGAGGAACCAGACATGCAGGTCTTGTTTGTGAACCTGA
CGTAACGCACTTCTAATTCACCCACAGAATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTGAAAA
attgggttattgcgtgaaagtcgaggaaaatttgcgtgaatgcgtgaatt
tcgaaaaaaaattgcgtgattgcgtgaattaagggtccgctggggggcct
ctacTAAGTAacatatttcaattcaaaagtaaaaaaaaaaaaaaatagtt
tatttAGTTACACTAGATAATCCCTTAAGCTAAAAGGAGTTGAGTAATCA
AATTGTTTATCGATACTTGGGATTTATGTTCTTTTTATAGTAAACTGTTT
ATAGCTtgatttagaacatttttattccTTACAAACAATGTCAAAAAATA
TACATAAACAATTACAATCATAGCATTTGTTCTAAATCCAGTGAAATTGC
TGACAAATTCTATTGCTAATCAGCTAGTCTGTTAAAGAGTGCATCTACCT
TTGTTTCGCAATTCTGTGCGTAGTTGATTCAATTTTTGAGAACTTTTGGT
AGGTTAGTTCAGACACAAATGACCAGTATTGAGATTCTAGAATGAAAGGT
ATTTGGTAAAACTAGAATGTTTGTTATATTGTATCCGAACATTTTTTGAT
AATTGCAGAAAGATAAAGATAGTTTCGAGTTTAATAAGGCAAGATTGTAT
GTTACAATTAAGATTTAATTAGAATGATAATGGACTTCAATTTCATTACC
GATGGGCTTCTTATAGAAATTATAAATCTCAGTCCAAGCCGAAAACCATT
TCAGATGCTAGTCAAATTGCAATGGAACAGCCATCATGAAAGAAAAAATG
GATGATATTCAAAATAGAGCTTGTTTATTCAGAGTGACCATGAACATGGA
GTGACACAGGTTTTATAATTTTTGCAAATCTTCTCTTAAACGACGTCATT
GAATCATTTATCATTCATGCTAAGCACACAAAACCACCTGAGTCACGTTA
TGTTATTTTATAAATAATGTATAGAAAAAGTCTCGACATTCgtttctgat
ttttctttttcagtagtTTGAAGATTACATAGAACCAGTGAAATACTAAG
AGAAAGCAGAAAGCTTGTAGCTGAAtgcttttgaaagattttaaacGTTT
CATGATTTGATTCGTTATGTTCAAACTTCCAGCAGTTTCTTTAAAGGTTT
AAAGGTTTCCTTTTCAATTTTACGATTCTAGATTAATTTCTtttcagtga
aaaaaataaaatcacacATGGAAGAACAGGAGTTTGGTGGAGGGAATTTC
AAATTATTCTACCCTACACAGCCCTTGTCTGATATCATGAATAAcaatga
aattcaacaaaatttgtaAGAATTTACACTTATCCATCTTCTCGTATTCA
AAATACAgggtttttcagaaaaaaatggaaaacttGTGTTATAAATTGCG
TTTAAGTGCGTTTATAAGTGCGtattagactatgctatagtctaagacga
gtttcatctaagaggaacaaacgtgaagacgggaattttttacggAAGTA
GCCGTTGtcttaaacacagactctatccgccgcgaaacatattacgtttt
ataatatacaaattatgttatatcataataatatattatacggacgatag
catcgtctaagtGCGTATAAGTGTGCCTAATACCTTTTTACTTTCCCAGT
GAGTACATTCAAAGCGCTCCATTTCTCTTTTTTGCGTTATATACATTTTA
TATGTGAATATCAAAAACTATTAAGTTGAAAATATCTTTGAATGAAGGCT
TAATCTCAGAAAAGATCTCAATGCAAGTAGCCACTTTGGTGGCAATAAAT
CTAGCAAATAGCTTGAATTTCAAGTGGTAAAGTTTGGTGGTTATCGCAAT
TATTTTGTTAGAAATTTTTATACTAAACCCTTTCCAAACAAGGGGAATAC
TATACAATCAataggattttttttggaatagtaATCCCATaagttttgac
aaaatttcAGAAGAAGATCTCTTTAGTTGGCAGAGTGCTCAATGCTATCA
TGGGTGCACCATTGTGTTCTATTCTGAACTCTATGAGAGGATTTATCTTC
AATATAGGCCACTCAGTTTTGGGAGAGTACTTAAGAAAATGGTGCTTTCA
AGAAACTGCCTTAAAAAGTTACAAGTGTTAAAGAAGTTGATATAAAGCTT
GTATAATCAATAGAAAATAAACACTGTAAAACTTCTGCCCTTGAATTTGA
ATGGAGGAACCAGACATGCAGGTCTTGTTTGTGAACCTGACGTAACACAC
TTCTAATTCACCCACAGAATAAACGTAGTGTGGATTTGGACTCTCGATTC
TCGTGGCATCTTGCCATACATCACTAACCACAAACCCGTCGATCCATTTA
ACATATTGTGTAAATGTCTTGTTGTGCTTCGTTACGTTCCTTTGACCATG
TAGCTTGAAGAAATATAAAAAGGGGGTTATAGCTTTGAAATCACCAACAA
AACTCATCACCATCGTTTGGCCGCGTCGAGACAAACTTGAAgtattgtta
aatatttgctaCTAATTACTATAAAGAAACGCAGATCTGACTATTCACCT
ATCAGCTCTTAGCAGCACTATTGGGTTTTGCAAGGACTAGGTTCTCAAGG
AAAATCTTTTCTCAGTGCATGGCTTTTCTAGGCTGCCTTTAAAACAAGTC
AGGTAAATTCCTTCCAAAACTCATACTTCATATGAGTGATATTCCCTAAA
CCCCAGATGCGGTGTGTTAGTTAAGGGTGTATTACCCTGAAACAAACTTA
AAGTTCACAAACACCAGACTTTAGGACTTACAGAAATAACATAACCATCT
GAACCAATGGGCATCCAGTATTCAACTGATCCTTTTACCGCCATTGGCTC
AGCTTTATTGTTCGCGTACCACTCTCCAATGATTTTCGATTTATTTTGTC
CTAATTCAAAACATCCATCACCTTGGATAACTTTCCTCGTACCTGGCCAA
GGCTTGACCAATACATTAACATATCTGAACCATGAACCAGATAGATCCAA
CGATTTCGCATTGTTATCTACAAATAATGAATAATAATGGAAACTAACTC
AGCTGACAGTCTCTGAACTTTGATTAAAAGCTGGAAAGGCAATTGTTGTA
GAGTTTGTGTGATCGATAGCCATTTTTTATGTATGAGGAATGTAACCTTT
GAAGTCAtccaatgaagaagaaaaagaagtcattgtaaaTGAACTTCAGA
TCAACATAAATCATTGAAAACTCTGCAACGCTACTGTTAGTTAATGTTGT
TCTTATGGTTTCCCGAGAgaatattgtatttttatttctaaTGACCCTTA
GTACAGTAATGCTATAGACTTTTAAGTGGTGTTGAGCTTTTTGGGGTATT
TGTATATGTCATCAATTGGGAACTATGTTTTAAGGGAAAAACCTTCACGT
GATTTTCACGTGTTTACCACGTggctttgttgttatgattctgTTGCGTG
ATACTTTACCTTTGGTATAGCCATCAATTACtgatgaattattttttaat
tgcaGCCTAGGTACCACACTAATTTCTCTCTTGGCTTGGATTTTACCATT
CTGAGCCAAAAGTTTAATTATTATGTTTGCTAAATATTTTCTATATATTG
CTTGATTGACGTAGATAAATATTTCTCAAAGATTGTTCCAAACATCTAaa
ccagtagcgtagacagggctGAAGATTGATctgcgtaggagagcagattt
ttacgaCTAAGGTGGTATAAAAACATAATTACTGAGTCGTTTAAATCTGC
CCTCTTAAGCAAATGTTCCTTCaaccctgtctacgctactgtaaaCAACT
AAAAGTTATTCGAACGAAACTTCTACAGATATTTGACCATGACCAAACCA
GTAtgtttacacattttttttttataagaacgtcaaaatttttcgaagcc
ttcggatattcttagttctttggatttgaagcctaaaaatgttcttaaaa
tgttcttattttcagcattttttgagcattttgatgtaatttcttaagaa
attgcatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNaaattgcatgtttttaagtatccaaagccttagtatg
ttcttagaatgttcttaaaattttgggcctcgaagccttatgttcttata
tagtttgttcttataaaagaaaaaacgtgtagttgcaTTATCAGTGATGC
ATTTaaactagcctggatatccaggctgtaaactatttcacagtctagtt
tttgatattttatgttctggtttacagcctggtctccctagagcgatttg
cattctccatatgagaatgcagtccgcttgcttgcgctcacttcgctaaa
gccgtaaggaccaATACACGGCGCggagcaaaaataggatagtcccccac
ttgctagtgaagatagagctttctgttacatgaaaacatgaaaaagaaga
agacagAGGCAAGttttttttccaagaaaacatggtctgatggttggtca
tgataatgcatgcaaacttgttcatggactctggtgtaatctttggatgt
tttaaatggttttagatcttgtcAGGCTGCTTTTTactaatttctgtttt
gctgccctgggttggctaggaaatttttggaaacatgggtttgcactttc
attctctagggagaccaaactctataattttagaactttgtatgttgagg
taaattttgttttttctaaaattttgagcttggatatccaggctacattT
AAACCTGACCGATCGCTGCTACGATCCTTGGACAGTTAGGATActtcaaa
aattcaaagaataACGAAAATTGAGATGCGTCAATTTTACGTTAATGTTC
TCTATAACACGATTTTTTCGACTTTCACATCTATCCAGTTTTAACCTAAT
TGAATTTAACTTTGAACAAGTCAGTTTTCAACTAATTCTGGTTTTTCCAG
TTGCCTTTCCCtctaaaagtgttttttttttctcgcagCCCTTTTTTCAT
TCGTTCAACAATCAGAGAAAACCACATTAGAAATTGCCGGATGTCATTCG
ATCAAAAGATACGAGGTAATTGTCACGCACCTTAATTATACCACTTCAAA
ATTTTGCTATATTTAAAAAGTCATAGATTGGGATTTGTTATTTCATCACT
TCATATGAATCTGTGACAGTTGACAGTTGCAAGTATTTTTTCTTGTTGTG
ATACAGACAACGTATTTTAGAGTgattttgagagatttttttaaGAGAAC
GAAAAGATGGAGTTGGAGCAATTCGAGTTAATCGATGGTGATGAAACAAg
gtaaagttttctttttgtctCCATCTCCCCTAGACTCTAGAGGGctccat
tttcatgaaatttccaAAGCGTAGGGGAGAGTTGATGCAAAATATATtca
tttttaattcatttttgtgGAGGACGCTATCAGTTTTATTGTTGTCTTTT
GCACCCTTGTTTCACGTcctcggtggaactttttcccacagcggTGCACA
GCAGTGATataaatttctatcgaaatcccgatggggatagaaattctatt
gtttccagctcaaaaaatgcagtggggtggttttggagtgcaatctttta
cattaatttaaattgggatgaaaaaaaagtcagatacctagtggggctga
aattgaaGGGTATTTTCCCATCTGAGACgttattttgaccaaattttcct
GTGTGCCAGGGGCCCCACcgagtctgtgacacagggttgtttttattttg
tctcaAGTTATAATATCACTCGGTCATTGACAGTAGAGATCACTTATAAG
TAAACAGGAATTTGTTTGGATCAGTTTTCAAGCACTTCAAATTGTATTCA
AAGTACCTCCTCGACCTTTTCAAAACGGAAGTTATTGATAGCGCTAAGCT
GAAACACGATCTTTCATTCGTATTCTGGAAAAACAGGATGTTCAAAACCA
GATCTTTAGATGATAGTTTCTCATTTACAGCAAGGATCGAAGGGAACACT
ATTAATTTTAAGAATTTGCTTGCAGTTTCTTTGCGGAGAAAATCATGTAT
GTATaaagtgtttctttttattttgtttttccttgCTAATTTTTTAATGA
TACTAATTTTGCATTCTGCATCAACGACAGGTCACTTGCCTTGAGTACCC
CTCCCCCGGTGGATTAATACGCAAGCTTcgtttgcgaatgtttgcattAA
CTCTTTGATGCTTTTCAAGTGCTTCTAATTGTTGTCATTCTGTTTTATTT
CTATTCGAAATATCTGGAAGAGGTAAATTTCAAATTGACCAGTTTGTGAA
TAAAGGGTTTTTTATGATCGTGTTAATTAACGCTGATAATTGTTGTCTTT
ATATTATTCCAGTAGACtaaatttgttgatttttgtaAGGGCGTATTCCA
TTCCATAATCAAGTTAAAACAATGTAGTAACTCGGAATATCTAGATGAAC
TTTCATACTTTCTATTTTGAGGTGTATACAAGCCTTTTTATTTGTTTCGT
AAAGCAAATCTATTTTGATAAAGCTCTGTTAACATACTTTGACAAAGGGA
ATTTCAATATGgtttatacacgtttttataagaacaaactgtataagaac
ataaggcttcgatggacaaaatgttaagaacaaNagaacaaactgtataa
gaacataactcTTCGATggacaaaatgttaagaacaagttaagaactttt
taaggctttgcggactcaaaACACacgttttcttaggaaaatgggtaaaa
atggtcacaaaatggttaagaacattttgaggcttcaaaacttttggatg
ttcttatagaatAATGTGTAGTTAGATTTAGACTTATCTTATTATAAGTA
GGTGCATGCTTAATTTGGTTAAAGACTTAAGCTGCTGGcataaattagat
ttattgtAAACAGAAATGGGTATTGTCTTGggacaatgatttttttcttg
tgcTCTGTATTCCTGTATAGTGCCATACAGCACGaattttcgtgggtcac
ccttATGTCCTTGTGTCACGGGGGGCCGGGGGGCCGTAGAAGAAATTCAC
TTGATTTGATTTCAGAAAGCTAGAGATGATAGAATTACATAGatatcaaa
taaaagaaaaagggaGATATTAATAATAAATGTTTGATAAGCCTTTTCAT
TGAACCGAGTTTCGTCTCTCAATATATGAGAATATATCAATCGAAAACTG
TGAATGAAAATATGATCAGTTGATAAAAAACTCGCTGgagaaaacatcaa
aaaatatatttctcagAAGAAAGAGATTGTCTATATATATTTTGGTGTGT
TGAAAGGAAACGTTTCTgaaattttagttttgttttttttgtggggAAAG
ATGGCTGTTGAGAGAGCAGAGGAACTCCGGTTGTTTTGCCCGACCGAACC
ATTGGCCAAAATGATGAGAGGAGATGTAAGGTAAGGATGTTCCTTTATCA
TTATGGACATATGACTTGATATTTCTGGGATCTAAGGTTCTGACTTGATT
TTTCCCGTTCGAGACCGTGTAGTGtctttcgctagcgattttacAGCAAA
AGTTCGATTTGTTTTGGGCCTAGGATATAGTAGAAGCTTCTTTGTAAGCC
TTCgactgaatttcaaaattctttccaaatttaagaaattctaataatta
tttctattttgggCCTCCTTATTTCCGATAGCCTGAATAAGTCACGCACG
ATCTCACGAGACCGGCTTTTCGGTGATGAGAATACCGTAATTGGCCATCG
TTTATCAAGGATTAATTTACCATCTCATGCAACTATTCagtaaaagtttt
gatttttcaaagttcatttttgactgGTGCCTAGGACTAAAGCTATTTTT
GAAGTAATTTgcatcatcatcgtcatcgtcATATGTAACAATTTCGTAAT
TAGatgagattttttcttttatgcTGACTTTCTAATTACTATTAGCCAAT
AATGACCccttaaaaagattttgatgtttttgaaaaaagcagTATCACAG
CCAGATTTAcaagtttttcatgttttcaatcCGATTCATAAATCTCTCGT
TCATAGTCATCAAGCTTAGAAGTAGACAGGTCTTTAAAAATAATTGCGTc
atgtttttgtgtttttacgGTCtgttcaaaactttaaaactacCCCTTTC
TCGCAAACTACATTGATTTTCTGCCTTATCCCTTTGCTTTATAAGCATTA
AATCATGAATACGTGATGTCTCGATCATTGCAATCCATAGACAATCATAC
CCTCAAACACTCCTCTGTGGTTGTCATGACGAACAATGTTTCATCTGTTT
CTCAGAAATGTTGTTTTCCTTCTCAGTTCTCAGTTAACACACGGTCGAGA
TATGGAAAGAATTTCGATCATATTTATATAGCAAATCATGATATGTGACC
CTTTCAAGGTTTCAATTTTACTGGGATTTCGAAGCAGTAACTCTTTAGTA
TCTGAAAACCTTCAGATTGCTCTTATAGCTCTCTCAGCtttgtttttgat
ttcccaGCTGGATTCTCTCAAAACACAGTGCCCTCtatcataaagaaaaa
aattatcaatgcATAACAACTTTCCCACTGCGTTTTCTGCAATAATCAAT
TCAACAGACTTTAAAACGATCGATTCGAAAGGTCATTTCTAGCATAACAT
GTCACAAGCTATGGAACAAATATTTCaggatcaaaataaaaaaatttgac
ttgTCTACCACCAGGTCCAGAACCTCTAGGTCCTTAAAATCAAACCCACC
ACATCACATTGGAGAAGCTTCGTCTTTCTCTTTAGATAGAAGTAAAGTTT
GCCCCTCAAAtctatattgagaattccgcttattttaacgtttttcaaga
tttaaagttgcggcgagaaagtcgattttgggctatctctttcatttaat
cgaatatttcaatttgggaggggttggcagacttccaagctatattctga
gccttctTGGactatttttggatttttgggtcctcagatcctaaggtcct
tcctaagtcttaagtctagcgttaaaaatCAGAGTTGAAATTCTGCCCTT
CGAACCTACCCCCGGGGGgttactaggtttgcgaggtgacgggtatgtcc
gagccgaaaatcgaaaattttgagagacaaaattttggtgattttgggac
cctttgagagactttttcctaaattttgatccattttttccaaattttgg
tttgattttcaccaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNTtacaacttatcaagttttaattgctagcaaactcgtaaaaaagtttg
ataacctaacgaggagtgttttctatgagttcttaatccacctattctaa
tccgttggtgTAAGTAACTTATTTCAGGCGATCAATGTTTTTTCTTGGAA
GGATTTTATCTTCTCCTCATCGTGTGCTCGATAAGTTAATAGAGCAGTAT
TATATTCATATTAAGATTGTTCATTAAAGGTTTGCGTGGAAGCGCCAAAA
AAGTCCTGAGTTTTAAATCAGATTTTATGTCACCTTATTATAGGGGTTTC
TTCGAATTTGGATACCCCTATGGATAGCGGCAGCTTTAGTTTTAATCTTT
AGGTTTCCTTataaaagtttgtgtgtgtttgAGGAACTAGCTCGTTTTCT
TTCCTATTCATTCTTTAAAAGCTAtggtttacacgtttttttttttaaga
aactagttttaccaagcagcctcaatgtttcttaagaaatcggccttttg
agtcttaaatgtttcttacatgtttcNgcctcaatgtttcttaagaaatc
ggccttttgagccttaaatgtttcttacatgtttctaaactttttgacat
aatcagccttataaaaggctggattggaaggttcttaaaaaaacgaatta
aagaatgtttttttttccttctcagcctcagcatgtttcttagatgtttc
ttagtttttagacattctgagcctcatgtttcttaaaagtgtgtttctta
aaaaaaaaaacgtgtattctttatgattcttCAGGTCGAAGGAGGATTCC
TTCAAATTCACCATGACGCAACTTCAACAACGTCATCCGTCCGTCACTAA
ACCGTTCCAAGAAGAATTCGTCGACGTTAACATCAAAAATGGATTCTTCG
ACGCTGCCAACAAAATGAGACGACAaggtatttgattttttctcaCTCCG
TTCAGAGGGATTCAAACACGTTTATAGCAACGAAATCAACCTTTACCCTG
ATCTAGGGTACGTCATTATTTTCTTTTGCCGCGAGCATAAAACACCTCTA
ATAAGTACCTTTTAACTAAAGATCTTCTATATATGTTATCGCACTGCCCT
TTGGTCAAAATCTTTCGGCATCTGTTAGACCTAGAAATCTAGCTTCAGTG
TATACCCCAATGTTAAGTTTTCCAAGCGttgaatatatatatatactatA
AGAGTATCTTAGCCAGTATTCTTACGATTTCTTCCCATTTCTTTCTCAGG
TGTTTTGACAGACGTATCGCTAGTTGTTGATCAACAAACCTTTCACACTC
ATAAACTGATATTATGTTCATGCAGTGATTATTTTACTAGCATGTTTAAC
GGTCCTTTGGCGCATCACGGCCAACAAGTCTTCATATCGGGCGTCAGTGC
CCAAAGCATGGAAGCTATTTTGAATTACGTTTATACGGGATCGATTATCA
TCAACGAGGAGTTTATACAAGACATTTTAGAAGCAGCTtgtttgtttcta
ttgaaaaactTACGCGAACGATGCGCGCGATTTCTGCGCGACCGATTAGA
TGGTGGCAATTGTTTACAGATTTTCAGTATCGCTAAAAGTTGTTCATTGT
TGGCTTTGATGGAGGATTCCCTAGAGTTCATCTCCGCGATCTTTCAAGAT
ATTTCAGCGCTGAATGATTTTAAACAATTAAGTTTTGATGAACTTATTGA
TGTATTATCTCTTGAAGATTTAGCAGTGCCAAGTGAAGATTACGTTTTAG
AGGCAGCATTTCGATGGTTAAATCATGATTTATAcggacgtcagcaaaaa
tttgtaGAAGTGCTAAAAGCTATACATTTACCATACGTTAGTGACGATAT
GTTAAAACAGGTCATGGAGAATGAAAAATCTTTACGTACTTTTCCTGAGC
TGGAAATTCTCTTCCGTTCCGCCTTACGTCTTACCGTTGAAAACTGGACT
CTCTCCAAAGACAGTGATTTTAATTTACTCCAACCAAAATCATGGATAAA
TCCACGAAAATGTATTCAATGTATACCGAGTCTTATCGCTATGGGTGGGC
CTACATTGAACTTATTTAACAGCGAACTTGGAAAATGGTGTGAAATAACG
AAATGTAAACCACGGCATTGTCCAGGTATGGATGTTGTTGGGTCCACTAT
CTATGTTGTAGGTGGTTCACTGGAATGGAAACGAAAACGTACTGGAGAGT
ATTACAACACTGAGAAAAATGAATGGATCCCAATGGCGGATATGCACACA
CCACGAAGTAATTTCGGTCTCGTCAATTTGGAAGGGAAACTGTATGCTAT
CGGTGGTTATGATGGGAATTTCCCTTTAAAGTAAGCTTGATAAAATCTCC
TTTTTACTTCACTGTACTATAAAACTTGAGCCTAATTTTGGTTGTAAAAT
AATTCGGTCTACTAGGTAGCTCTTGCAGCTCATGTTTGCAAATTGGATTC
TACAACAATTAGTATTTCCAATGAGCTAAACTTAGGCGAATTAAATTGAA
CAGTCATGTGAACTTACTTTTGTTCCATCAGATCAGCAGAGGTTTATGAT
CCACGTACCAACCAATGGACGCAAATCTCCGACATGACGACGGCAAGAGA
CGGCGCATGTAATGTGTCGGACGGCGAATCGATTTACGTGATTGGAGGAT
ACGACGGCCACGAATACAGACTGACGACAGAAGTTTATAAACCAGAAACT
GGTCTATGGGATATCAGTTGTAAGTTGCGACATCCTCCcctatttttttc
tattttaagtCAACTCACTCCTTTTAATTCGAATcattttaactaaaaca
ttggatcttgagctttaaatatgTATACTATATTCaagcttagttaacta
ggcctGTATTTACAAGACTAAGACATTATGGACGTTGAAGTTTGCCTTCT
AGGCTACACTAGAATCTGCGTAAAAATATATggaggatttttttatttcc
tcgttttttgAAGTTCGgtcgagaaagtcgcttttggtcTTTTTCTTAAA
TGTAGGGGTTTATAAACTTCCAGGCAATATTCTGAGTCTTGTTGGGCCAC
TATTAaacttttgaatcctcagatcctaaggacCTAATCTAAGTCTAGCG
TAAAAACACTACCGTTCCAACCAAAGTTAGcccgcttccaaatcgtttgt
ggctactataagatttcgtgggattttccctttttttctcaaatacatGT
ATTACGATCTTGATTGTATATCCTCCGTAATTGACGTAATTCTGAATGTT
GTGAAAGAGTTAACTTACATGAAAACTCCATTTGGTTTATCAGCTATTCC
AGAGACATCAGTGCAACGTCAGAACGCGATGTGTGTATACTTTGATTCGA
GTATTTACATTATTGGTGGTTACCATGGAGATACTTATCATTCATCGATG
GAAGTATTAGACCTGGAAACGAACGAATGGTCTTTTTCAAGCCCCTTAAG
TGCACCAAGACATCACGCAGGCGCCGCTGCCATGAATGGGTAAGTCGTGT
TTGATTCTTTATGAATGTTTACTTCAGTATCTATCAGCATCATATTGTCC
TTTAAGTTATTGCTTAATTTTTAGAGAAATTGTATTCTACTTTTCCACAA
AGGACCTTTCTTGCATCtaatgtttcattttcaaagcgTATGCTtaattt
atcgttctttaaacCGTTAGTGCTTAACCTCTGTAATGTACAAAAAGGAA
TGAAATCGCTGGGATGGTTTCACTACTACGGTTCGGGGGTTGGGATGGCT
AAATTAGTCGTTCTTTATTgttttgaattcaatttttcgttgatgagaat
tttttttttcttctttctgaaaGAAAGAgtaaattttaaattcaaaacca
CAGAATTCACAATCTTGCTTGGTTTCTGTATGAAATAGAATTTGCCATGT
acgatatttttgacatttcgtTGTGATTTACAACATATAATTTCCTCAAG
GTTTCTTAACATGAATCTATTCTTCTCTTTTTCTGCAGAAACATTTACAT
TTGTGGTGGTTGGAGTGCACATATTCCCGTCAGCCACGTTGACGTCTACT
CTATCGCTCAAGATACGTGGCGTCGCGTTTCGCCTCTTCCCACACCAACA
ATGATTCGCTCAGTAGCGGTTAACTTCCCACGAAAATGCATCTTGAATTT
ATTCGCTAACTCAAACAGTGATATGGCGGCTTATCGTGCGTCAAGAATAC
GCTCCTTGCGTTCCATCTCGGAGTCATCTTCTTCAGGTAATGAGAAAACA
CAAACAGAAGCTGAAGCTTTTTTGACTTCCTCGACTGATGAGTAGAATCT
TGATTTTGTGTTAATATTTATTTCATGCTTTGAGTATATATTACCCTTTC
TAATCGGTCTCTTGAATCAAGAAACTTGATGAAGCTTGGCAAAGTAAGTC
TCTCAGTTCGcccatttttttaacaatataGTGTAGCACCTAATATGGAT
ACCATACTAGCAAATAGCACGAAATCATTAACTACCCAACAAGCAGTTTT
AAGGTGCGTTTGAAAAATGTCTTGGGTAAAAAGCTTCGAGGGATCTTATA
ACATTTATATTTCTTATGAACTTTCATTTTGTATTGTATATAATTTATTA
AAATTGAAACGTTTTTATAcaattaacatattttgaagtttaattttctt
caattttcgtTTTTGTAAATACGATACCAAAAGTATCAGGgacaaatttc
atttttggtgACAACTTTTATGAAGATTCTCCTGCATCGCCTGTTTTGTT
TCTAGATGATCTTCAAAATGACAAAGCTCTTCTATAGCCGACCATTGTCC
CCCCACCTCCAAAgcaaattttcccaaaaattagtGTCTTTTCATTCCCT
TTGCTTTTTTGTATTAATTTTTTGCCTTTTGTAAAATAGAATATGATGAA
TATATTTTGTGTTACTTGATATTCAAATAAGATTGACAGTATTAACTACT
AAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043382XLOC_043382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069669-exon-scaffold_505-1491911889:33964..34082TCONS_00069669-exon-scaffold_505-1491911889:33964..34082Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1510915933:33964..34082TCONS_00069669-exon-scaffold_505-1510915933:33964..34082Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1575043694:33964..34082TCONS_00069669-exon-scaffold_505-1575043694:33964..34082Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1491911889:50048..50190TCONS_00069669-exon-scaffold_505-1491911889:50048..50190Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1510915933:50048..50190TCONS_00069669-exon-scaffold_505-1510915933:50048..50190Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1575043694:50048..50190TCONS_00069669-exon-scaffold_505-1575043694:50048..50190Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1491911889:50513..51593TCONS_00069669-exon-scaffold_505-1491911889:50513..51593Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1510915933:50513..51593TCONS_00069669-exon-scaffold_505-1510915933:50513..51593Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1575043694:50513..51593TCONS_00069669-exon-scaffold_505-1575043694:50513..51593Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1491911889:51795..51982TCONS_00069669-exon-scaffold_505-1491911889:51795..51982Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1510915933:51795..51982TCONS_00069669-exon-scaffold_505-1510915933:51795..51982Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1575043694:51795..51982TCONS_00069669-exon-scaffold_505-1575043694:51795..51982Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1491911889:52557..52752TCONS_00069669-exon-scaffold_505-1491911889:52557..52752Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1510915933:52557..52752TCONS_00069669-exon-scaffold_505-1510915933:52557..52752Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1575043694:52557..52752TCONS_00069669-exon-scaffold_505-1575043694:52557..52752Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1491911889:53252..54219TCONS_00069669-exon-scaffold_505-1491911889:53252..54219Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1510915933:53252..54219TCONS_00069669-exon-scaffold_505-1510915933:53252..54219Clytia hemisphaericaexon
TCONS_00069669-exon-scaffold_505-1575043694:53252..54219TCONS_00069669-exon-scaffold_505-1575043694:53252..54219Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_505supercontigscaffold_505:33964..54219 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00886292	0.944657	1.42799e-05	2.80309e-05	0.0380914	0.0379287	0.0148762	0.060049	0.00119956	0.441674	0.0860584	2.07483	0.00523719	1.02109	0	2.74515e-08	1.15434e-10	0.64112	3.0585	1.55736	0.11165	3.03486e-07	0	8.67875e-10	0.0116422	0.00258543	0	3.15367e-08	5.2868e-06	1.47357e-07
Blast
[Close]
BLAST of TCONS_00069669 vs. Swiss-Prot (Human)
Match: KLH17 (Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 5.492e-78
Identity = 173/580 (29.83%), Postives = 282/580 (48.62%), Query Frame = 1 
Query:  232 FDAANKMRRQGVLTDVSLVVDQQTFHTHKLILCSCSDYFTSMFNGPLAHHGQ-QVFISGVSAQSMEAILNYVYTGSIIINEEFIQDILEAACLFLLKNLRERCARFLRDRLDGGNCLQI--FSIAKSCSLLALMEDSLEFISAIFQDISALNDFKQLSFDELIDVLSLEDLAVPSEDYVLEAAFRWLNHDLYGRQQKFVEVLKAIHLPYVSDDMLKQVMENEKSLRTFPELEILFRSALRLTVENWTLSKDSDFNLLQPK------SWINPRKCIQCIPSLIAMGGPTL-------NLFNSELGKWCEITKCKPRHCP-GMDVVGSTIYVVGGSLEWKRKRTGEYYNTEKNEWIPMADMHTPRSNFGLVNLEGKLYAIGGYDGNFPLKSAEVYDPRTNQWTQISDMTTARDGACNVSDGESIYVIGGYDGHEYRLTTEVYKPETGLWDISSIPETSVQRQNAMCVYFDSSIYIIGGYHGDTYHSSMEVLDLETNEWSFSSPLSAPRHHAGAAAMNGNIYICGGWSAHIPVSHVDVYSIAQDTWRRVSPLPTPTMIRSVAV----NFPRKCILNLFANSNS 1908
            F A ++MR++G+L D+ L V  +    HK++L SCS YF +MF   ++   Q  V +  +  Q+++ ++ + YT  I++ E  +Q +L AA L  L  +R+ C +FL  +LD  NCL I  F+ A SCS   L++ +  ++   F D++   +F  L   ++++++S + L VPSE+ V  A   W+ HD+  R+Q    ++K + LP +S D L   ++ E  +R  P+ + L   AL+             F+LL  +      S   PR+C    P L A+GG +L         +++   +W  +     R    G+  VG+ +Y VGG        T E Y+   N W P   M T RS  G+  L G LY+ GGYDG   L SAE YDP T  WT ++ M+T R      +   ++Y +GGYD   +  T E Y+P+  +W  S +     +R +A     + ++Y+ GG  G +  +S+E    +   W   +P++  R      AM+G +Y  GG      ++ ++ Y+   + W   S + T      VAV    NFP      L  +S S
Sbjct:   79 FVAMSRMRQRGLLCDIVLHVAAKEIRAHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDPQALDQLVQFAYTAEIVVGEGNVQTLLPAASLLQLNGVRDACCKFLLSQLDPSNCLGIRGFADAHSCS--DLLKAAHRYVLQHFVDVAKTEEFMLLPLKQVLELVSSDSLNVPSEEEVYRAVLSWVKHDVDARRQHVPRLMKCVRLPLLSRDFLLGHVDAESLVRHHPDCKDLLIEALK-------------FHLLPEQRGVLGTSRTRPRRCEGAGPVLFAVGGGSLFAIHGDCEAYDTRTDRWHVVASMSTRRARVGVAAVGNRLYAVGGYDGTSDLATVESYDPVTNTWQPEVSMGTRRSCLGVAALHGLLYSAGGYDGASCLNSAERYDPLTGTWTSVAAMSTRRRYVRVATLDGNLYAVGGYDSSSHLATVEKYEPQVNVW--SPVASMLSRRSSAGVAVLEGALYVAGGNDGTSCLNSVERYSPKAGAWESVAPMNIRRSTHDLVAMDGWLYAVGGNDGSSSLNSIEKYNPRTNKWVAASCMFTRRSSVGVAVLELLNFPPPSSPTLSVSSTS 641
The following BLAST results are available for this feature:
BLAST of TCONS_00069669 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH175.492e-7829.83Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE... [more]
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