TCONS_00069744 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069744
Unique NameTCONS_00069744
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length457

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069744 ID=TCONS_00069744|Name=TCONS_00069744|organism=Clytia hemisphaerica|type=transcript|length=457bp
CCCAGCGTTGTGTACGTAGAGTTGTGTACGTTCGGGTTGTCAGCtcttta
aaatttgtaaattggcCGCTATAGAATTTCCCTCACAAAGAGGTTTCACT
TACCAGATGACTGGATGAGTGTCATTATTGTTGTAGAAGAAGCACCAAGt
aaaattcaatcatcaatAATCAGTCAATTTCGCTCCCAGGTTCAAATttt
tatacttacttacttggaTAACTTGGAAACAAAGGACCATAAAAGATTCT
TCTTTGATGCTGCCTGACAGtcagtgttttctttttcagatttatccaca
aatattcaggcATATTATTCTCAGCCACTTGATTGCCTTGTCACCacaat
ttatgtaaatatacaggcaaaaGTGCAGTTAGTTTCTTCTGAAAGTTGAC
AATACCATCCTGCTGTTTTTTTCAACAGGAAGgtataataagaaaacttc
atcatca
Run BLAST on NCBI

transcript from alignment at scaffold_506:432791..433247

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069744 ID=TCONS_00069744|Name=TCONS_00069744|organism=Clytia hemisphaerica|type=transcript|length=457bp|location=Sequence derived from alignment at scaffold_506:432791..433247 (Clytia hemisphaerica)
tgatgatgaagttttcttattatacCTTCCTGTTGAAAAAAACAGCAGGA
TGGTATTGTCAACTTTCAGAAGAAACTAACTGCACttttgcctgtatatt
tacataaattgtGGTGACAAGGCAATCAAGTGGCTGAGAATAATATgcct
gaatatttgtggataaatctgaaaaagaaaacactgaCTGTCAGGCAGCA
TCAAAGAAGAATCTTTTATGGTCCTTTGTTTCCAAGTTAtccaagtaagt
aagtataaaaATTTGAACCTGGGAGCGAAATTGACTGATTattgatgatt
gaattttaCTTGGTGCTTCTTCTACAACAATAATGACACTCATCCAGTCA
TCTGGTAAGTGAAACCTCTTTGTGAGGGAAATTCTATAGCGgccaattta
caaattttaaagaGCTGACAACCCGAACGTACACAACTCTACGTACACAA
CGCTGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043429XLOC_043429Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069744-exon-scaffold_506-1491911889:432791..433247TCONS_00069744-exon-scaffold_506-1491911889:432791..433247Clytia hemisphaericaexon
TCONS_00069744-exon-scaffold_506-1510915933:432791..433247TCONS_00069744-exon-scaffold_506-1510915933:432791..433247Clytia hemisphaericaexon
TCONS_00069744-exon-scaffold_506-1575043694:432791..433247TCONS_00069744-exon-scaffold_506-1575043694:432791..433247Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:432791..433247 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.36245	1.10861	0.932032	1.38835	2.03249	1.47361	0.18392	0.378317	0.134731	0.154546	0	0.190548	0.336615	0.395222	0.759856	0.759582	0.674661	0.868376	0.912426	1.26003	0.738827	0.607183	0.596366	0.149122	0.472112	0.847427	0.648813	1.01128	0	0.485316
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069744 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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