TCONS_00070122 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070122
Unique NameTCONS_00070122
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1056

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070122 ID=TCONS_00070122|Name=TCONS_00070122|organism=Clytia hemisphaerica|type=transcript|length=1056bp
CTACTGGAACAAACACTAAGAAGCACATTCTAACAGAAGAACCAAATTAG
aaatttgtaaataaataaaattgtatatatctgaatttaaaaaaatatga
atatCACACCAGCATCATTAAATGGATTTCGATCAGCAGCACCACATCAA
AATAAAGGACAACTTCAGGTCATTTTTGGGCCAATGTTCTCGGGCAAAAC
AACTGAACTGCTACGAAGGATAAAACGTTACGAAGTAGCGGCGTATTCAT
GCTTGGTGATCAAATACGAACATGACAAACGATACAGCGATGATGGCGTT
GCTACACATGACAGacAAACATTCAAGGCAATTTCTTGTTCGAGGTTACA
AGATGTTGTTAATATTGCAGTGAAATACGAAGTTATTGGTGTTGATGAAG
GCCAATTTTTCCCTGATGTTGTCGAATTTTGTGAAAAGATGGCTAAGCTG
AAAAAGACGGTAATTGTAGCTGCGTTAGATGGAGATTTTCAACGAAAGGC
ATTTGGTAATATTTTACAATTGGTACCACTAGCAGAAAGTGTGGTCAAAT
TGAGTGCAGTTTGTATGAATTGTTATGGCGAAGGATCTTTCACCAAACGA
CTGAGTAATGATACTACGATCGAAGTTATCGGTGGAGCAGATAAATATAT
GGCAGCTTGTCGAGATTGTCACTCTCAAAACTTAGATATCGACACTTTAG
AACGTCAAAAGGAGAAAGTCCGACAACGACGTAAACCTTTACTTTCAATG
GAAAATATTTCGACCGGTATTCTTTTCCACCATCGTACCGAGAATGCAAG
TTTTTAAGGGAAGTAAAATTTTAGGATTTTAAGTGATTCGCTTTTGTATA
TATGTTTAGacaattttattcaatttttcggCTGAGTTAGAGGAAACTTG
CCTTTTAgtcttttcaaagtttttcatactctatttcaagattttttacg
tcctaatttttcttttaacttttatattttagaTAGATAACCATTTTCCT
GATAATTTTTAAATGTTCATGTATACCCAGAAATATAAGCTAAATTATGA
TGAAAT
Run BLAST on NCBI

protein sequence of TCONS_00070122-protein

>TCONS_00070122-protein ID=TCONS_00070122-protein|Name=TCONS_00070122-protein|organism=Clytia hemisphaerica|type=polypeptide|length=236bp
MNITPASLNGFRSAAPHQNKGQLQVIFGPMFSGKTTELLRRIKRYEVAAY
SCLVIKYEHDKRYSDDGVATHDRQTFKAISCSRLQDVVNIAVKYEVIGVD
EGQFFPDVVEFCEKMAKLKKTVIVAALDGDFQRKAFGNILQLVPLAESVV
KLSAVCMNCYGEGSFTKRLSNDTTIEVIGGADKYMAACRDCHSQNLDIDT
LERQKEKVRQRRKPLLSMENISTGILFHHRTENASF
Run BLAST on NCBI

transcript from alignment at scaffold_513:557493..569778-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070122 ID=TCONS_00070122|Name=TCONS_00070122|organism=Clytia hemisphaerica|type=transcript|length=12286bp|location=Sequence derived from alignment at scaffold_513:557493..569778- (Clytia hemisphaerica)
CTACTGGAACAAACACTAAGAAGCACATTCTAACAGAAGAACCAAATTAG GTGAGTTTATTTTTATAAAGTCTAAAGGTAAGATCCTTCCGAGAAAAATG CAATACTAATGTAATGCAAAGTATGGATATAAACACAAACCTTTTAAACA TTTATTTGCAAATTGTATTTTGTGAAGACAACGACCCTGCCTATGCCCCG GACAGTCCGGGGCAAATGTCTGGGGTCTGAAAAAAATAACTTTTTCCCCG GACCTACGTCCGGGATTCCAATTTTTGCGCCATAAATTTACCCCGGACGT TTATGAATTGAATTAGAAAAAAGCCCGCGCGGTCAGCGATTCTATAAAAA GCGACCACGCAGGCTGTCTGGGGCGTCCGGGGTAGTCTCTCAAAAACAAA TAATACGGACCCCGGGCACGCATCAAAAAAACCCCGGACTGTCCGGGGCA TAGGCAGGGTCGTTGAAGACAGACCCAACATCCCACGGCGCACGACAGGG GGAGGGCACGGTGTATTATATAGACCTTTTTGCCTTTCCATTCGCCATAT TGAATTGTATGCAAAAATTATTAATTAAATTAAAAAAATTAATCAAACAT ATTAGTTGTTTGGGAAAATGGGAGGATGGACTTATTTGAATAACTAATTA CTCCAGCAGAAAGTTTTTTAAATGATAACATCATATTCATATACCGGGTA ACTTGCATCAGTGGAGGGAAACTTGCATAGCCATCAAATGACTGACAGAC TGACCAATAGACCTTTTTTTAAAGAGGCCACCCTGTTGAATAATTATGTA GTCCAGCAGAAAAACAATGATACAGTCATGCATAATTACTGTATCATGTA TATTGTAATAATTATGCATGACTGGACTACATAATTATTCAACAGGGTGG CCTCTTTAAAAAAAGGTCTATCAAAGCAGATCAAAGCCGCAAAATTTCAA AACAAATGAACAACACAGCTCAACTCGCAGCAGCTCTACTCTACCATTTT TGTTTTGATTTTACTTTGTATTTTAATGACCAGACAGGTCATTCATCTGA GGCCTTTGCATGTTTGCCTCCACTGAGGCAAGTTACTCGATCTCACGGTA ATTGGTTTGTCATTTATAGCACAGCTGTTACCTAGGTACAAGACAGTGGA AATACCTCCTAAAGCAAGTTCAAAGTTTACAATGACGACTTTCTTTTTAT TACGTTAACCATACAAGTGAGAACAAGTCATTAAAACTAGAAGTCAGCAC TCCGCGGTTGTGAAGTAAAATTGTGAAATCATGATTCTCCATGGTTACGA AATGGCAGCTATGGGCAATTCCTTTGTTCTTTTGCTACATTTAAAGGAAG AAATTTTGGCGGGAATTTAATTTGGCGGATGGCCAAAGGACAAGGACATT CTAGTCCAAAAAATGCCATTAAAAAAGGAAAAATGTGTTTTAAAGTCTGA AATAGCACACATTTGGAGGAATAAATAGAACAATTTTAATTTGGCCGGAA CTTAATAGACCTTTTTGCCTTTCCAAAAATTATGGTGGCCGGATTGCTGT GCCGAAGATTTTGAAGGCATGTTTTATACCTCGATTTTCATCAGCATTTC ATGCTCTTTCTGTTGATATCATCAGATTTTAAATATTTTCAACAAAAAAA ATTTTTGCTAAGCCACCTGATGACGTCATCTGGCAGGTGGCCAGTTGGCA AAATTTGGTGTTACTGTTTAAAATTAAGTTTTAGACCCTCTAAGGACCAT CTGTGCCAAATTTCATGCTTTAATCACCATCTGAAGTATTTTTGTGCTAA CAGACCTCACTATTTAATGTTATATTTAAATTTAATTTTTAACATAGATA ATAGCTGATAGCGTGGATATAACATTTGTTCGACAAAGTTTTTGATTTTC ATGCTTTGATTTACATTTGAAATGTTCTTTTCTATGAATCGAATTTGTTT TGTTTTGAAAAGACTTCGAATGCCATTAATGAGTACCACGATCGTTAATT ACATTTAAAAACATTTAAAGAANCAGTGTCAAAAATGGTCCATTCCATGT GAAAAGTTTTCCATGTACAGTACTTTACAGGGATTAGACAAAAAAAGTTA TCAAAAAAACCCAATCATTTTCTCCCTAAAAACTAGATGCTTTTCTTTGC CCATAACTTTTTATAAAATTTTCCCCCTAATTTCATTTCCATTCTTATCC TTTTGTGATTGATGCTTTATTTAAGCTGCTTGGGTAACTTGTTTATTATT TTTTATCTAAGGGCACACAACACTCACTCTATTTCAAAATAAACGACTCT TATTATTTGATTTGAAAGAAGGTTTTTCTCATTTTCCTGGAAAAGTTTTT TCTGTATTCCCTATTAAATATTAAAGTTACGTCAATGAGCTCAACCACTA AAATTTACCCCAAAGTATTTGGATCAATCAATCATACTATACTAATCACA CTAGTATGTAGTATTTAGTCACTCACATATCGCAAAGTTTTAAAATATTT GAGCTTGACGCAGGTAAAGCTGGTCTGATCAGGTCTGATACAGAATATTT GATTCAGTCTATGTGTGAACACTTGTTGACAGACTTTGGAAATCCAGGAA GACCCGCAACTAACCTTACATAATATCCTTATATGATGTCTATTTAGCAA GCTCTAAAAACTTTCAAAATTACTATAAACCACATTAAAAGACCAGCCAC CTGTTTCAAGTTCTGAGACAGCTACTATTTTATTTTGAAGTGTCGTGAAG GAAATCGAAAATAGTTTTGCTGAGTCAATATTTACCATAAATGATTTGCA CATTACGGGTGCATCAAAAAAAAGTATACAGGTATACGAGATATTGTGAG CTTCAGGATTTAAATTTTTTGTTCATTCTTTTTTCATCGTATAGAGGATG CTCTAACTTGAATTTTGACCTATCATACATTAAAATTGAAAAAGTAGCTC GAAAGTCATTCTAAAAAATCTGACTTTTTTCCCATGTCGAAATTTCAAAA AATCGTTAAAAACAGCAATCGCGCTATAAATAAGACAAAATGACAAAAAC ACAATTTTATTGTTTTTTTTTTATTGTTTTTTTTTCTTATTTATATTTTG CCAACAGTTTCTCCATCTTATTTGCATGTCATGAAAATTTCCAACACGAG CAAACTCAATGTAGACCCAAGTTCTTTGAGCCACTAGTCGAAAAATGGTG ATCTATTTTTTCAAAAGTTTTCTCACATAGCACACACATAACATCAAAAT CTCTCTTGGAAATTTATAAAACTTTTTTCAGCTTTTCCAAAAATATTATC CCTCATGGGATAACCTGTTTTATCATATGTTTCAAATTTCGTAACGAGTT TTGATGAACACAGTTGCATTTTCGTATTTTTACGTGTAAAGAAGGTAAGT GTCAAGAAAAAAGTTTGCTCACTGTTTTTGATGATTTTTTGACATTGAAA AAATTCAGTTTAAAAAAAAATAATTTTCGAACTACTTTTTCGAATTCAAT GTATGATAGCTTATAATTTAAGTTAGAGCATCCTCCATACGATAAAAAAA GAATGAACAAAAAATTTGAATCATGAAGCTCACATATCTCGACAAACCTG TGTACCTTTTTTGGTGTACCCCGTATAAAAATTATCAAAGTGCACAGGAA GGTTATGGTAAATGATACGCAAAAAAAACTGATTAATCAAGCTGAACCTG TATTGCAGGTAAAAGTCTTCCTGAAAGCAAGTTACTTGCACCAAGGGGTA AACCAGCATAAATAAAGCAATCAAAACTAGACTGTGAACAAAGTTTAACG CTTGGATTCCCAGTCTACCTTGATGCTTAGAAGTTTGATAGTTCTGTAAT TAATCTTTTTGTCCCAATTTTGTCAGACCTGATTACCCCTTTTGAGAGAT AAAGATACTGGTTCATTATTCAACATAAAATAAGTGATTCTGACTCTTCA CAAATTTTTAATGAAATATGGGAGTTTAATAACCTGCGTTTTGCCTGAAA CATAACGAATCAGAGATATAGAAATGAGACCCTGGTTTGCTTTTTAAAAG CATGGAGAGGAGAACAGTTTAAACTGTGGGTTATCCTTTTGTATTAACAC TTTGCATGGTTAAGGCTTCGAAATATATTACATATCTTGTAGCACATTTA TCTTACAATTGGATATTTTGGCATTATTTGGTCATAGGCAATGACGTCAA TGAATTTCGCAACTACAAAAAATAATTTCCCTAAACCAGTTGTGTGGCAG TTGAGTTCTCTAATATGAATATGAAGTATAGATTTGAAATAGTTTATTGT GTTTATGATGTTTTAAGGAAAACAAATAAAATGATGTAAACATGTCACAA TGTCATGTTTTCAAATATCAACAACAAAAAACTTGCGCTGAGATTAAAGA ATTAAGTCATGTATTTATTCCGTTGATGGCTTTCTTCTTTCTTTCTTTAT GTTTTTTCCTTATAGTTTGATATTTTAGATTTCTCTAAAAAACAAAATTA GATACACATTTCAAAGTAGCGGCTAAGGATTTCAGCGTGAAAAAACATAT TTTGAAATTGTTATGCAAACACTTTTATTTAGAAATAGAACCCCAAAAGG GACCAAATCGTAATTTGACACCCTCTAAAAGAAAAACATGCAATAGTTAG GGATTTGGTTAAGACATTGAGAGGTGTTTGTGTTTATTCATGCCTAGGTC ATGCCTTATTTATGAAGTATTGAATTTTAAGTATGAAAGACTGTCTAGTA AAATCACTGCTTTAAAAACGTTTGACCTTAAGATGATGATCTATGGTGGA CTTCAGTCGCAAGAGAGTGATAGAGAAGAAAATTTTTATAAGTTTTGTCA GTTTCATGATATCAGCATTTTTAATTATCTTTAAATCTTTTTTCTTCTAG AAATTTGTAAATAAATAAAATTGTATATATCTGAATTTAAAAAAATATGA ATATCACACCAGCATCATTAAATGGATTTCGATCAGCAGCACCACATCAA AATAAAGGACAACTTCAGGTGAAATTTTGTATACTAACTTTCGGGCTACT AAGTTTCTCTTATAAGGGAGCAATCTTCAATAGGCTGTTCATGGAATTTT GGGTGAAATCGAACTCTGTGTAATCAATGAATTATAATATACTACTGTTT TGTAATTTTTATGTGACTATAATGTTATGCACTGTACCATTTACAAGCCT AGTTTGAACGTTGCATGATATTAAACATTTTGATTATAGTAGTAAGTCTG CGAATGCAGTCGGAGGCGATCCGAAAGCTCCTATTTCGATAGCTATCTAC CCGAAGGTAGGGAGGACTGCACTCTTTTCCCCTGGATTGATCCTTCTCTA AATTGCCGAGCATCAAGCAGAGAGGCGTCAAGTACCATTTTGAGAATCTT TGGTATGACCCGGCTGGAGGTTGAACCCAGCACCTTGCGAACCGTAGCTG GATGCTCTACCACTGCACTGTAGTGATTATAGAAAAACCCTGCTATTACT CAGAAAGATTCTATGAAAGATTGTTCCATTCATTCAACATAGATCCAAAT ATCAATTTGATATTGCTTAGAAAGGTTTATATTTTAATTTTGTAGGTCAT TTTTGGGCCAATGTTCTCGGGCAAAACGTAAGATATTTTATTTTGCCATT ACTTTTTTCTACATACCCCATCTAATGTCATATATTGTTTTGTTAGAAGG TGGTAGTAGGGCTTCAAGCCCAGCGATACGGCTTTCGAAATCACACTCTT ACAGTGAAAAGAATTTCATGAGAGTTTCTTGTTGACGGGGACTTTAAATT TTATCGAATAAAAGAGCCTATCGAATAGTAGAACATCGAATTAGAGAGCG TCAACTGTATTTAAATCATTCTTACATTGAAATTACACTGTTTTTCATAT CATTTTTAGAACTGAACTGCTACGAAGGATAAAACGTTACGAAGTAGCGG CGTATTCATGCTTGGTGATCAAATACGAACATGACAAACGATACAGCGAT GATGGCGTTGCTACACATGACAGGTTTGTTGCGTTAGGTTAAATGCAAGG GGGCTACTAGGTTTGCGAGGTGATGGGTATGTCCGAGCCGAAAATCTACC CTTAGAGGGAGGAAAAATTGACGTTTTTGGGACCCTTAGAGAGACTTTTC TCAAAATCTTTATCTATTTCCACTCGATTTTTGTCCAAATTTTGTAAAAT CACGACCCTTTGAGAGAGGAAATTTTGAATTTTGTTAATTTTGGATCCTA ACAGAGACTCAATTTTCTTTTTAATTGTTTTTGAAACCCTTTGAGAGACT TTCGAAGGTGTGAAAAAGGGACCCTTATGGCTCACATATACCCGGCGTCT AAGAACCCCCTCCCCCGGGTTAAATGAATTCATTCTTACTTTTGTGGGTA TGAGAAAATCTCCTTTACCTAAAAGTCTAAAATATCACGATTTTCATTCT TCCTATACCATGCGTTATTTCTTTGCACGTGATTGCAGAGCTTCCATGAC GAAGTTTTGGTTTTCTAAAACTAGTCATAGCTTTCACTAAATGCCCCCAC AGAAAGGTCATCTCATGCACTTATAAAGCTTTTAATGCTTTAAAAATTAA AGCATAAAAAATAATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNAAAAAACTTTTTTGGCCATCCGCCAAATTAAATTCCCGCCAAAATTTC TTCCTTTAAGGTATAAAATTTATCAAAAATTTCTGCGCCATCTGAAATAG ACCAATCCTGGTTAAGGCCCAGCCTCCACTTGCGTACGCTGTGATTGCAG TCAAAAGAAAAATAAAGGAATGTCATTGTGGTCCATTTAGACGTACAGTC GAAAAGTTGAAATGTGCTTAATATTTTTTCAAGTGCATAGTACTTTTTCA TGATGCAATCTTTTCTCCAAGCTGAAAGGATTGAAGATATGATTGCAGCG CAGACAATGAAGAGACGGACCTTCAGGAAACTAGAATTTTTGAGTTTTTA GCTATATACTCTCACTTTATGGTGTTCCTGTATGACTGTCTGTGTGCCTA GTCTAACCACCGTTAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTTCTATTGTTCTCTGCGTACATGGGGG GAGGGGGTATCAAATTTTTGGAGAATCTTTGCGTACGTACTATATGGACA GCCCCTATCACAATTCTGCATGAAAAAGTGGAACGTGCGCATGAAAAGTT AAACGAATGTAAACAAACTTTTTTCAGGTTTTTAAAATAGATTTACCACA CTGAACAAACAGTGAAAACACTCTAAGTGAGGTAAATCTATTTTGANNNN NNNNGAACAAAAATATCAAATGTACATTTGAAAACTTGAGCAAACTTCTT TAAAGATTCCAGAAAAAGAATTGAAATCATTGCTGAAATGAACTTCTAAC TAAATTACAATATTTAGTATTCAGTTTGAAAGACAAGAAACAAAATTTAA CATACGAAACACTTTTTCCAGTCAATGAATCAGCTCATCATCATAACCAG TCTGCCATTTTGTTTGTTTTGATTTGAACAAGTAATATTGTAATTCTTGT TATGGTGTAATCACTATACTTTTTCTATAATTTGCATTTATAACACTCGC TTCAGCTTTTCAATCCTAAATCAAAACTAATAAAATGTAATACGCAATAA TGGTAATAGCATATAACGTAATATGAAAATATGTATNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNCGCTGTATAATTTACCGCCATATTTTTGC GGAACACTTATTTGGCCGGAAAGCCGATTACGACGCAAAAACAAAAACAA TTCGCAAAAAATCGAGATTCCCGTCCAATATATTGCGTGAAGCTACGAAT GCCCCCTCAGTCGCTGCGCTCCTTGCGGGGGCAATAAAAGAGCTAGAATA CGTAAGGTCAATATTTGCAATATATTATTTGACACCCCCTTCTCACAGAC CCGGTAGGATTTTCAGCCAGTGGGGGTAAAAATAATGAACCAAAACGCGA TGGGGATTGATATTCCCATATTTTTTATGACTGGTGATTTGAATGTCATT GTTTTCAAGGCAAAAAATTTAGGCGGGTTTGAAAAAATAGCACAGAATTT TGCAGTGAGAATTTGCTTGTCTGATTATTTTCAGCAAGTTCAAAATTAGA GTACATTTTTCTACTGGGGACCATATTTTGGCCAATTTTTACAGCGGGGA GGGTCCCCAGTGGGTCTGTGAGAAGGGGGTGTTATTTGGAACTTTCGTTG ATCTTAAAATTTTTGAATATGTGTACTGCTGAAGTCAAGTACTAAAGAGT TTTATAATTTTGATAAAAAGTATATCGCCCTAGTAGTTCCGTTCAACCAC ATGAAAGAGCACGAAGTTTCGTGTATATTTTTGAAAAATAGATGATGAAA ACGAGGGAGACACCCTGTATTATCTGCTGTCCAGAAGGGGTAGCCTAGAA ATCTAAGCTAGTTTGATTCAGTCACTAGGATAAATCTGATGAGTTGTGAC TGAATACTGTATTCCAAGGCAAACTTAAAATCCGTAAATATAAAAAATCT TTAAAGCGCCGAAAACGCTATATTGCCATTAGCCTGAATATCCAAGCTCA AAATTTTTGAAAAAAACAAAATTTACCTCAACATACAAAGTTCTAAAATT ATAGAGCTTGGTCTCCCTATAGAATGAAAGTGCAAAGTTTCAAAAACTTT CCTAGCCAACCCAGGGCAGCAAAACAGAAATTAATAAAAAGCAGCCTTAC AAGATCTAAAACCATTTAAAACATCCAAAGATGTCCATGAACAAGTTTGC ATGCATTATCATGACCAACCATGTTTTCTTGGAAAATTAACTTGCCTCCG TTTTCTTCTTTTTCATGTTTTCATTTAACAGAAAGCTCTATCTTCACTAG CAAGTGGAGGACTATCCCATTTTTGCTTCAGAATTGCTCCGCGCCGTGTA GATTGATCCTTACGGCTTTAGCGAAGTTAGCGCAAGCAAGCGGACTGCAT TCTCATATGGAGAATGCAAATTGCTCTAGGGAGACCAGGCTGTAAATCAG AAACATGAAATATCAGAAACTAGACTGTGAAATAGTTTACAGCCTGGATA TCCATGCTATATTGCCATTAGCTGTGTGTCCTAGCCTTGTGAATACGGAC TTGGTTAACTATATGCTACAGAAGGGGTTCAATATCTTTATTTTTTTTCA AATTATTTTTTTAGACAAACATTCAAGGCAATTTCTTGTTCGAGGTTACA AGATGTTGTTAATATTGCAGTGAAATACGAAGTTATTGGTGTTGATGAAG GCCAATTTGTAAGAATCTCAGTCATTTCAATATTTTTAATATAGTGGAGT CTCTTTAACTTGAACTTCTATAACCAGCTATAAATTCTCCTTCTAGAACT ATTTCTCTAGAATTTCTCTTTTAACTCGAACAACCATGATCCCTTCAGTT AACAATATCTTAACAATAGCTCGAAATTTCCTTAACTCGAACAAATTTGT GTACTCCTTGCGTGTTCGAGTTTAGATAACAATCAAGTGCAAAGTACTAG TTATGTTATGTTATGTAGCTATTATAGCATTTGCAGTCTTTGCCACCGTA CTTTCCTGTCTACTTTATTCTTAGTTCCCTGATGTTGTCGAATTTTGTGA AAAGATGGCTAAGCTGAAAAAGACGGTAATTGTAGCTGCGTTAGATGGAG ATTTTCAACGAAAGGTTAGTTGCTCTCTAAAAAATGTACACGTGTTTTAT AAGAGCAAACTATATAAGAACATAAGGTCTCAATTGCCGAAATCTTAAGT TTAAGAACAAGTTAAGAACATTTTAAGGCTTTGACTCTAAAACAGCCGAT TTTTTCGGAAAATGGAAAAAAATACTCACATTATGGTGAAAATAAGAACA TGTTAAGAACATTTTTAGAGCTAAAACTCAAAAAGTTATGAACATCCGAA GGCTTCAAAATTTTTGGATGTTTTAATAAAAAAACGTGTATTAGCAAATT TAGACGTGTGATTGCAAACAAAAATTATAGAGAGGTATTGACAAACTTTT ACCAACCCCACTATTAATTTTGAATAAATTATGCCCTAGAAGTCTAGGCT AGAACCATCTGGAAGTTGAAATTTTTCGAAAAAGACCTATTGATTTCAGT CTATAAAGAGAGACCCCCCCCCCTAAAAAGGCCTTAAAAATGATCCCGTT GGAAAATCTGAAAAATGAACAAAATCCTCTTGGAAAATCTACCCCCTGAA AATTAAATTTTATGCTCCAATACCTCTGTATGGTTTAAAAACGGAATAGC CCATTCGATAAGTCGATTTAAGAGTTACCGAGTTTAATAAATGAATATTT TTCAATTCCTTTATAAGTTCCAAAACCAAATAATGTTGCTTTAAGAGTTG CTGAGTGCGGATATTTTTTTACTTTTTGACTTCTTTTGAGTTCCAAACCA AAGAATACACATAATTGTAACAATTTTGTCTTTTTCTAGGCATTTGGTAA TATTTTACAATTGGTACCACTAGCAGAAAGTGTGGTCAAATTGAGTGCAG TTTGTATGAATTGTTATGGCGAAGGATCTTTCACCAAACGACTGAGTAAT GATACTACGGTAAGCCAATGATATTCCTTTTTTTCTAAATAAACAAATTC AGTAACTTATAATTCACATTACTGGAGTCGTTTATAATACGTGTTATACA GTAATATTGGTATTATATGATAATACGATAACTGTTACGGGATAATATCA GTGCGTATAAAAATAAAAAAAAATCTAAAAAATCTTGTATTGTAACCGAA GTTACGACTAAGCAGTACATGTTTTTTTCTATAAGCATAACTTTTATAAG CATATGCAGGCTCATATTTTGGTACCTTAGCATTCTATTGTTCTTAAACA ATATAGCCATTTTTAAGAACAATAGAATGCTAAGCATAATGCGAGCCTGG TGTAGGGGTAGACACTTGCTTATAAAAAAGACATGTGCACCCCTCTATTA CCACTTTAGCAAGTTAAGAAACGATTGTTTTTCTCGATTTATTTCCAGAT CGAAGTTATCGGTGGAGCAGATAAATATATGGCAGCTTGTCGAGATTGTC ACTCTCAAAACTTAGATATCGACACTTTAGAACGTCAAAAGGAGAAAGTC CGACAACGACGTAAACCTTTACTTTCAATGGAAAATATTTCGACCGGTAT TCTTTTCCACCATCGTACCGAGAATGCAAGTTTTTAAGGGAAGTAAAATT TTAGGATTTTAAGTGATTCGCTTTTGTATATATGTTTAGACAATTTTATT CAATTTTTCGGCTGAGTTAGAGGAAACTTGCCTTTTAGTCTTTTCAAAGT TTTTCATACTCTATTTCAAGATTTTTTACGTCCTAATTTTTCTTTTAACT TTTATATTTTAGATAGATAACCATTTTCCTGATAATTTTTAAATGTTCAT GTATACCCAGAAATATAAGCTAAATTATGATGAAAT

Coding sequence (CDS) from alignment at scaffold_513:557493..569778-

>TCONS_00070122 ID=TCONS_00070122|Name=TCONS_00070122|organism=Clytia hemisphaerica|type=CDS|length=4977bp|location=Sequence derived from alignment at scaffold_513:557493..569778- (Clytia hemisphaerica)
ATCGAAGTTATCGGTGGAGCAGATAAATATATGGCAGCTTGTCGAGATTG
TCACTCTCAAAACTTAGATATCGACACTTTAGAACGTCAAAAGGAGAAAG
TCCGACAACGACGTAAACCTTTACTTTCAATGGAAAATATTTCGACCGGT
ATTCTTTTCCACCATCGTACCGAGAATGCAAGTTTTTAAGCATTTGGTAA
TATTTTACAATTGGTACCACTAGCAGAAAGTGTGGTCAAATTGAGTGCAG
TTTGTATGAATTGTTATGGCGAAGGATCTTTCACCAAACGACTGAGTAAT
GATACTACGTTCCCTGATGTTGTCGAATTTTGTGAAAAGATGGCTAAGCT
GAAAAAGACGGTAATTGTAGCTGCGTTAGATGGAGATTTTCAACGAAAGA
CAAACATTCAAGGCAATTTCTTGTTCGAGGTTACAAGATGTTGTTAATAT
TGCAGTGAAATACGAAGTTATTGGTGTTGATGAAGGCCAATTTAACTGAA
CTGCTACGAAGGATAAAACGTTACGAAGTAGCGGCGTATTCATGCTTGGT
GATCAAATACGAACATGACAAACGATACAGCGATGATGGCGTTGCTACAC
ATGACAGGTCATTTTTGGGCCAATGTTCTCGGGCAAAACATGAATATCAC
ACCAGCATCATTAAATGGATTTCGATCAGCAGCACCACATCAAAATAAAG
GACAACTTCAGATCGAAGTTATCGGTGGAGCAGATAAATATATGGCAGCT
TGTCGAGATTGTCACTCTCAAAACTTAGATATCGACACTTTAGAACGTCA
AAAGGAGAAAGTCCGACAACGACGTAAACCTTTACTTTCAATGGAAAATA
TTTCGACCGGTATTCTTTTCCACCATCGTACCGAGAATGCAAGTTTTTAA
GCATTTGGTAATATTTTACAATTGGTACCACTAGCAGAAAGTGTGGTCAA
ATTGAGTGCAGTTTGTATGAATTGTTATGGCGAAGGATCTTTCACCAAAC
GACTGAGTAATGATACTACGTTCCCTGATGTTGTCGAATTTTGTGAAAAG
ATGGCTAAGCTGAAAAAGACGGTAATTGTAGCTGCGTTAGATGGAGATTT
TCAACGAAAGACAAACATTCAAGGCAATTTCTTGTTCGAGGTTACAAGAT
GTTGTTAATATTGCAGTGAAATACGAAGTTATTGGTGTTGATGAAGGCCA
ATTTAACTGAACTGCTACGAAGGATAAAACGTTACGAAGTAGCGGCGTAT
TCATGCTTGGTGATCAAATACGAACATGACAAACGATACAGCGATGATGG
CGTTGCTACACATGACAGGTCATTTTTGGGCCAATGTTCTCGGGCAAAAC
ATGAATATCACACCAGCATCATTAAATGGATTTCGATCAGCAGCACCACA
TCAAAATAAAGGACAACTTCAGATCGAAGTTATCGGTGGAGCAGATAAAT
ATATGGCAGCTTGTCGAGATTGTCACTCTCAAAACTTAGATATCGACACT
TTAGAACGTCAAAAGGAGAAAGTCCGACAACGACGTAAACCTTTACTTTC
AATGGAAAATATTTCGACCGGTATTCTTTTCCACCATCGTACCGAGAATG
CAAGTTTTTAAGCATTTGGTAATATTTTACAATTGGTACCACTAGCAGAA
AGTGTGGTCAAATTGAGTGCAGTTTGTATGAATTGTTATGGCGAAGGATC
TTTCACCAAACGACTGAGTAATGATACTACGTTCCCTGATGTTGTCGAAT
TTTGTGAAAAGATGGCTAAGCTGAAAAAGACGGTAATTGTAGCTGCGTTA
GATGGAGATTTTCAACGAAAGACAAACATTCAAGGCAATTTCTTGTTCGA
GGTTACAAGATGTTGTTAATATTGCAGTGAAATACGAAGTTATTGGTGTT
GATGAAGGCCAATTTAACTGAACTGCTACGAAGGATAAAACGTTACGAAG
TAGCGGCGTATTCATGCTTGGTGATCAAATACGAACATGACAAACGATAC
AGCGATGATGGCGTTGCTACACATGACAGGTCATTTTTGGGCCAATGTTC
TCGGGCAAAACATGAATATCACACCAGCATCATTAAATGGATTTCGATCA
GCAGCACCACATCAAAATAAAGGACAACTTCAGATCGAAGTTATCGGTGG
AGCAGATAAATATATGGCAGCTTGTCGAGATTGTCACTCTCAAAACTTAG
ATATCGACACTTTAGAACGTCAAAAGGAGAAAGTCCGACAACGACGTAAA
CCTTTACTTTCAATGGAAAATATTTCGACCGGTATTCTTTTCCACCATCG
TACCGAGAATGCAAGTTTTTAAGCATTTGGTAATATTTTACAATTGGTAC
CACTAGCAGAAAGTGTGGTCAAATTGAGTGCAGTTTGTATGAATTGTTAT
GGCGAAGGATCTTTCACCAAACGACTGAGTAATGATACTACGTTCCCTGA
TGTTGTCGAATTTTGTGAAAAGATGGCTAAGCTGAAAAAGACGGTAATTG
TAGCTGCGTTAGATGGAGATTTTCAACGAAAGACAAACATTCAAGGCAAT
TTCTTGTTCGAGGTTACAAGATGTTGTTAATATTGCAGTGAAATACGAAG
TTATTGGTGTTGATGAAGGCCAATTTAACTGAACTGCTACGAAGGATAAA
ACGTTACGAAGTAGCGGCGTATTCATGCTTGGTGATCAAATACGAACATG
ACAAACGATACAGCGATGATGGCGTTGCTACACATGACAGGTCATTTTTG
GGCCAATGTTCTCGGGCAAAACATGAATATCACACCAGCATCATTAAATG
GATTTCGATCAGCAGCACCACATCAAAATAAAGGACAACTTCAGATCGAA
GTTATCGGTGGAGCAGATAAATATATGGCAGCTTGTCGAGATTGTCACTC
TCAAAACTTAGATATCGACACTTTAGAACGTCAAAAGGAGAAAGTCCGAC
AACGACGTAAACCTTTACTTTCAATGGAAAATATTTCGACCGGTATTCTT
TTCCACCATCGTACCGAGAATGCAAGTTTTTAAGCATTTGGTAATATTTT
ACAATTGGTACCACTAGCAGAAAGTGTGGTCAAATTGAGTGCAGTTTGTA
TGAATTGTTATGGCGAAGGATCTTTCACCAAACGACTGAGTAATGATACT
ACGTTCCCTGATGTTGTCGAATTTTGTGAAAAGATGGCTAAGCTGAAAAA
GACGGTAATTGTAGCTGCGTTAGATGGAGATTTTCAACGAAAGACAAACA
TTCAAGGCAATTTCTTGTTCGAGGTTACAAGATGTTGTTAATATTGCAGT
GAAATACGAAGTTATTGGTGTTGATGAAGGCCAATTTAACTGAACTGCTA
CGAAGGATAAAACGTTACGAAGTAGCGGCGTATTCATGCTTGGTGATCAA
ATACGAACATGACAAACGATACAGCGATGATGGCGTTGCTACACATGACA
GGTCATTTTTGGGCCAATGTTCTCGGGCAAAACATGAATATCACACCAGC
ATCATTAAATGGATTTCGATCAGCAGCACCACATCAAAATAAAGGACAAC
TTCAGATCGAAGTTATCGGTGGAGCAGATAAATATATGGCAGCTTGTCGA
GATTGTCACTCTCAAAACTTAGATATCGACACTTTAGAACGTCAAAAGGA
GAAAGTCCGACAACGACGTAAACCTTTACTTTCAATGGAAAATATTTCGA
CCGGTATTCTTTTCCACCATCGTACCGAGAATGCAAGTTTTTAAGCATTT
GGTAATATTTTACAATTGGTACCACTAGCAGAAAGTGTGGTCAAATTGAG
TGCAGTTTGTATGAATTGTTATGGCGAAGGATCTTTCACCAAACGACTGA
GTAATGATACTACGTTCCCTGATGTTGTCGAATTTTGTGAAAAGATGGCT
AAGCTGAAAAAGACGGTAATTGTAGCTGCGTTAGATGGAGATTTTCAACG
AAAGACAAACATTCAAGGCAATTTCTTGTTCGAGGTTACAAGATGTTGTT
AATATTGCAGTGAAATACGAAGTTATTGGTGTTGATGAAGGCCAATTTAA
CTGAACTGCTACGAAGGATAAAACGTTACGAAGTAGCGGCGTATTCATGC
TTGGTGATCAAATACGAACATGACAAACGATACAGCGATGATGGCGTTGC
TACACATGACAGGTCATTTTTGGGCCAATGTTCTCGGGCAAAACATGAAT
ATCACACCAGCATCATTAAATGGATTTCGATCAGCAGCACCACATCAAAA
TAAAGGACAACTTCAGATCGAAGTTATCGGTGGAGCAGATAAATATATGG
CAGCTTGTCGAGATTGTCACTCTCAAAACTTAGATATCGACACTTTAGAA
CGTCAAAAGGAGAAAGTCCGACAACGACGTAAACCTTTACTTTCAATGGA
AAATATTTCGACCGGTATTCTTTTCCACCATCGTACCGAGAATGCAAGTT
TTTAAGCATTTGGTAATATTTTACAATTGGTACCACTAGCAGAAAGTGTG
GTCAAATTGAGTGCAGTTTGTATGAATTGTTATGGCGAAGGATCTTTCAC
CAAACGACTGAGTAATGATACTACGTTCCCTGATGTTGTCGAATTTTGTG
AAAAGATGGCTAAGCTGAAAAAGACGGTAATTGTAGCTGCGTTAGATGGA
GATTTTCAACGAAAGACAAACATTCAAGGCAATTTCTTGTTCGAGGTTAC
AAGATGTTGTTAATATTGCAGTGAAATACGAAGTTATTGGTGTTGATGAA
GGCCAATTTAACTGAACTGCTACGAAGGATAAAACGTTACGAAGTAGCGG
CGTATTCATGCTTGGTGATCAAATACGAACATGACAAACGATACAGCGAT
GATGGCGTTGCTACACATGACAGGTCATTTTTGGGCCAATGTTCTCGGGC
AAAACATGAATATCACACCAGCATCATTAAATGGATTTCGATCAGCAGCA
CCACATCAAAATAAAGGACAACTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043656XLOC_043656Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070122-proteinTCONS_00070122-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070122-exon-scaffold_513-1575043694:569729..569778TCONS_00070122-exon-scaffold_513-1575043694:569729..569778Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1575043694:564761..564878TCONS_00070122-exon-scaffold_513-1575043694:564761..564878Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1575043694:564152..564183TCONS_00070122-exon-scaffold_513-1575043694:564152..564183Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1575043694:563756..563869TCONS_00070122-exon-scaffold_513-1575043694:563756..563869Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1575043694:559671..559764TCONS_00070122-exon-scaffold_513-1575043694:559671..559764Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1575043694:559265..559354TCONS_00070122-exon-scaffold_513-1575043694:559265..559354Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1575043694:558370..558489TCONS_00070122-exon-scaffold_513-1575043694:558370..558489Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1575043694:557493..557930TCONS_00070122-exon-scaffold_513-1575043694:557493..557930Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1510915933:569729..569778TCONS_00070122-exon-scaffold_513-1510915933:569729..569778Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1510915933:564761..564878TCONS_00070122-exon-scaffold_513-1510915933:564761..564878Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1510915933:564152..564183TCONS_00070122-exon-scaffold_513-1510915933:564152..564183Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1510915933:563756..563869TCONS_00070122-exon-scaffold_513-1510915933:563756..563869Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1510915933:559671..559764TCONS_00070122-exon-scaffold_513-1510915933:559671..559764Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1510915933:559265..559354TCONS_00070122-exon-scaffold_513-1510915933:559265..559354Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1510915933:558370..558489TCONS_00070122-exon-scaffold_513-1510915933:558370..558489Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1510915933:557493..557930TCONS_00070122-exon-scaffold_513-1510915933:557493..557930Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1491911889:569729..569778TCONS_00070122-exon-scaffold_513-1491911889:569729..569778Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1491911889:564761..564878TCONS_00070122-exon-scaffold_513-1491911889:564761..564878Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1491911889:564152..564183TCONS_00070122-exon-scaffold_513-1491911889:564152..564183Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1491911889:563756..563869TCONS_00070122-exon-scaffold_513-1491911889:563756..563869Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1491911889:559671..559764TCONS_00070122-exon-scaffold_513-1491911889:559671..559764Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1491911889:559265..559354TCONS_00070122-exon-scaffold_513-1491911889:559265..559354Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1491911889:558370..558489TCONS_00070122-exon-scaffold_513-1491911889:558370..558489Clytia hemisphaericaexon
TCONS_00070122-exon-scaffold_513-1491911889:557493..557930TCONS_00070122-exon-scaffold_513-1491911889:557493..557930Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_513supercontigscaffold_513:557493..569778 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.4772 20.668 7.49329 4.77908 46.714 40.6635 37.8038 41.2396 47.4389 43.5459 27.3715 27.4218 22.1466 15.3619 40.7903 35.1981 87.3512 61.5896 7.88112 13.7916 27.1337 24.1784 60.0326 57.1108 29.5913 31.587 34.2884 28.196 58.3457 55.561
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001267Thymidine_kinase
IPR020633Thymidine_kinase_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0004797thymidine kinase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0004797 thymidine kinase activity
Blast
BLAST of TCONS_00070122 vs. Swiss-Prot (Human)
Match: KITH (Thymidine kinase, cytosolic OS=Homo sapiens GN=TK1 PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.336e-75
Identity = 110/178 (61.80%), Postives = 135/178 (75.84%), Query Frame = 1
Query:  139 APHQNKGQLQVIFGPMFSGKTTELLRRIKRYEVAAYSCLVIKYEHDKRYSDDGVATHDRQTFKAISCSRLQDVVNIAVKYEVIGVDEGQFFPDVVEFCEKMAKLKKTVIVAALDGDFQRKAFGNILQLVPLAESVVKLSAVCMNCYGEGSFTKRLSNDTTIEVIGGADKYMAACRDCH 672
            +P + +GQ+QVI GPMFSGK+TEL+RR++R+++A Y CLVIKY  D RYS     THDR T +A+    L+DV   A+   VIG+DEGQFFPD+VEFCE MA   KTVIVAALDG FQRK FG IL LVPLAESVVKL+AVCM C+ E ++TKRL  +  +EVIGGADKY + CR C+
Sbjct:   13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKYHSVCRLCY 189          
The following BLAST results are available for this feature:
BLAST of TCONS_00070122 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KITH1.336e-7561.80Thymidine kinase, cytosolic OS=Homo sapiens GN=TK1... [more]
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