TCONS_00071539 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071539
Unique NameTCONS_00071539
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length152

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071539 ID=TCONS_00071539|Name=TCONS_00071539|organism=Clytia hemisphaerica|type=transcript|length=152bp
TTGCAGGGAGATTCAATCGAAAGCATCCGAACCACTCTTCATGCGAACAA
CTGAGAAAGTCAACCTTTTCCATTTCGTCAAAAATAATTTGGATGCAACA
AGAACCATGGCTCTTTACCAAGGTAAATATCAAAGGAAAATCGAATCATT
AT
Run BLAST on NCBI

transcript from alignment at scaffold_60:1023771..1023922

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071539 ID=TCONS_00071539|Name=TCONS_00071539|organism=Clytia hemisphaerica|type=transcript|length=152bp|location=Sequence derived from alignment at scaffold_60:1023771..1023922 (Clytia hemisphaerica)
ATAATGATTCGATTTTCCTTTGATATTTACCTTGGTAAAGAGCCATGGTT
CTTGTTGCATCCAAATTATTTTTGACGAAATGGAAAAGGTTGACTTTCTC
AGTTGTTCGCATGAAGAGTGGTTCGGATGCTTTCGATTGAATCTCCCTGC
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044440XLOC_044440Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071539-exon-scaffold_60-1491911889:1023771..1023922TCONS_00071539-exon-scaffold_60-1491911889:1023771..1023922Clytia hemisphaericaexon
TCONS_00071539-exon-scaffold_60-1510915933:1023771..1023922TCONS_00071539-exon-scaffold_60-1510915933:1023771..1023922Clytia hemisphaericaexon
TCONS_00071539-exon-scaffold_60-1575043694:1023771..1023922TCONS_00071539-exon-scaffold_60-1575043694:1023771..1023922Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1023771..1023922 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071539 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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