XLOC_001025 (gene) - C. hemisphaerica

Overview
NameXLOC_001025
Unique NameXLOC_001025
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:226733..229082-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001025 ID=XLOC_001025|Name=XLOC_001025|organism=Clytia hemisphaerica|type=gene|length=2350bp|location=Sequence derived from alignment at sc0000012:226733..229082- (Clytia hemisphaerica)
AATCGATATAACTTTTTCTAACAACAGTCAAACTATATACATTTGAAAAA
TCTCAATGTTTCCGAAAAAGTGAACAATTATCTTTAGCAAAATAATAATA
AATTTAAAACTACAGCAGTGCATTGTCTTATTAATCAGTTAATATCAATA
AGTTAATTAGCGATTGACCATAAAAAAGTCATAAATCCTTTGCATGATTG
ACTATCGATAATTCGAGATCAACCAGAAAATCTAGAGATTCTAATTGAGG
CATTTTATGGGTGTTCCATTTAACAACAAGGTTTTAATTCGAGAGTTTAA
ACGCCTATTCAACGTTTCTCGACTGTAAACCAAACTGACCCAATCGGATC
TTGAGACATTGATGTTGGATCAGGGATCAATTTCTCGACCGTTTTATCGC
ATTTTAAGACACGATATTTCATCAAAATACGACTCATAATAATTTTGACT
TCCATTGTTGCAAATCTCTGTGCGATACAATTCCTCGGTCCGTGACCAAA
ACCACCCGAAACAAACGGGTGGCGGGCGGCTTTCATCTCGGGAGCAAAAT
TTTCAGGATCGAATACTGTGGGGTTAGGGAAGTATTTCTCGTCCTTAACG
AATGCAGAAGAGGCAATTAACACATAGACATCTTTCGGGATAACCATATC
CGTATCTGGGATCTTAAAATCATTTACCGAAGCTCGCTCTAGATGCGTTA
GAGGATACATCCGAAAGCTTTCTTGAAAGAATTTCTCCATGTAAGACAAC
CCCATAATAGTGGCATAATCTAATTGATCAGAGCCATTGGATTCGGCAGC
TTCCTTGATTTCTTGGTAAAGCTTTTCTTGATACTCTGGATGCATTGCCA
AGAAGTATAACATGATTGATGAGGCTGATGATAAGGTATCAAAACCGGCG
AAAAACATCAATAAAGAATTAGCAATGATCAGTTTCTCTATCTCCTCCTT
CTTTAAGGTCGTTTCCGAATCATTAGCTGTTGAATTTTCTTTCAAGGTTG
CTTCTCCAGTTTCAGAAGGTCGCGTGCCATCTTCAATAGCTAACCCTTTC
TTTAAGATATCAATAAAAATATCAATAAAGTCATTCCGTTTCGATCCACT
CTCTTGGCGATCAATCATCGCCTTTTTCACAATGGCGGCAAAAAATTCCT
CAGATTTCGGATTGAAAAAACTCCAATCCATAACCACCTTAACATTGTTG
GGAAGAATTGGTACATCATAAACGTTAGAAATGTTTTAGCAGTCAATGTT
TTCCCTAACAAAGCGTCAGCGTTGGTTTTAAACATGTTCAATGGATCTTT
CATACTGTTCGATTCATAACCAAAACCAGTTGAAACGATTGTATCCAGGG
CGAATCTCCGCATCAATTCTTTGCCGTCAATTTCAGTGCCAAGGTTGTCA
TCTAAGAAGGCATCGCATTGATCTGCCACGTGGTGAATCAAAGGTACCAT
GACTTTCAATTTACCACTGGTGAATGCTGGTGTCAGTTGCGAGCGAACAT
TCTTCCATTTTTGACCACGTAACTCAATCAACATTAACTGGAAATATTGG
TTATTCTTAGAGTGAGGACTGAAAGGTTGATTCTGCAATGGTTTTCTTTC
AATAAATGTATCAAAATGTTTCACCAAGACGAGCTTTGCCAGGTCTAAAT
CTCGAATCACAAGGTTGGGATCACCAAAAATACCATAAGTACCAACGACG
GGGGAATCGGGGAACTTCTTGTACGCGCCATCAGTAAGTTCACCAAAAGC
AATTTTTTGGGTCAACATGTCCCAAGTACCTTGACTACCAAATGGAAAGT
ACCCAGGGTCAGCTGGGATTCCTCGTCTCTCCCAGAAAGTCATTTTTCGT
CTAACGTAGAGATAGAATGTTGTAAAAGCAACGATGATGACTGTTAGCAC
AATCTCCCACATCTCTTGCTTTGCAAATGTGTTTTAGTAACAAAATATCG
TATATAAATCCTTCTTTTCTTGCAACTGTTGTCCAACCAAAAGTTCTTTT
CACGAAAAATAAAATGTTATGCTTTCCAATTGCACTTATATTTCTGAAAG
ATGATGACCTGGTATTGAACACTTGTCAATGTTAACGTGTCTGTAAACAA
CGCCAAAACTGATGATAATGCACTTTTAATCGTTTTGGATATTCATCTAT
TTTTAGATAGCTCATTAAAAATAATATCACTTGGTCGCTCTTTATTTCTT
CTTACTGTAGATGAAAGGATATGAAACCATAGCAAAGATGTAGAATTTGT
TGCATAGATGTGAGCAGCTATTTGCATACAGAAAAAAACTCGATTCTAAT
TTCTATCGCTTCAAGATTACTTTTTTCGTGTAAAAAATCATGTCTTAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001987TCONS_00001987Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001987-proteinTCONS_00001987-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:226733..229082 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.11	1.03	1.54	1.14	0.63	0.57	7.33	7.58	12.43	11.64	13.63	8.56	6.69	5.87	3.45	4.85	3.78	4.58	8.49	9.68	8.51	9.68	5.91	7.12	6.71	10.83	4.45	3.08	9.71	7.61