XLOC_001933 (gene) - C. hemisphaerica

Overview
NameXLOC_001933
Unique NameXLOC_001933
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000028:216739..222828-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001933 ID=XLOC_001933|Name=XLOC_001933|organism=Clytia hemisphaerica|type=gene|length=6090bp|location=Sequence derived from alignment at sc0000028:216739..222828- (Clytia hemisphaerica)
AATGTGATCAAGATGGCGGCATCAAAAAAAAGTGGTGAAATCTAAATACA AGAAATTGCTTCGATCATCAAAAAAATGTTTTTGACACCACAATCTTTAT CTCTATTGCACCAACCTGAGCAACTCATTATAAACATAAATATGAGACGA ATCTCAGATTTATCAAACTCAACCTGTAGTTTGGATCAACTCAACACAGA GCAAAGACCACAGAAGAGAGAGAGGAATTCTTCAACTTGTACTGGTAAGT GTGGTGACGGAGTTTTTACCACGCCTGCTCACTCTCTTCAATAATCCAGC TAACATCTATATCATACAGAACTTTGGATATCACAACATTTTACCAAGAT GGTGTTGAAAAAATCGAAATACGGTGGAAATACAGGGAACACCCTCCGAA ATCTTTTCAGAACAGGTACGTAATGATGTCAGATTTGATTCAGGTTACAC TACTTTAACCGGATTAAATTTCGCGAGATTAAATTTCGCGAGCTAAAAAA ATCGCGAAATTTTCTGGATTTAATTTCGCAAGTCAGAGTTTTGAAATATT TTGCATGGATTTAATTTCGCGAATAAGCCAGAAAAAGGCTGAAAATAGCC ATTTTTTGCCATAAATGGAGACTTGGAACTAGTTTCTCCGCCAAAAATAC AATTTTAAAAGTTTTGTGGTGGATTTAATTTCGCGAATCAGGAATCTCAC GCGTGTTCGCAAGTTTTAATTTAGCGAAAATGGCAAAAATTCGCGAAATC GCGAAATTTAATCCGATTAAAGTACCACCCAACTGTTTTTTTTTCCAAGA ATCTTTCAAATATTCGTTCAATCAACCCGAATCGACCAATGAAGGGCTTA AAACGATTGGAATGTTAAGCGAAATTATGTTACTTATTAACTTATACAAA ATGGGATATGGGGACGTGCCACTGGCTAGGCCTAGGGTCTTTTTTAACGG CTTTTTTAACACTTTTGTTTTTGAGTTCCTAGACACTTTTAAAACCGTCT TTATAAGTTGTTTTTGTGAATTTATTCTATCAATGTAATTAACAATTTAA TTACAAAAATGACTTTATAGAATTCGGAGGGGAGAGGTCAAAACCTACGC AAAAGGAGGGTACGGATTTTGATCGGAAAATTGTTTTTTGTTCGACAAGA GATACACCATCTCGTGAAAAAAAGTTTTCAAAACGTTTTTTCTTCGCCGA AAATAAGGTCCTTTTAAAAGTTGAAATACTCTTCTTCGCAAAAGTCCTCA TTTTCTTCCCCTTCAAATTTTTTCATCGTGATTTTTACATTTTTAGATTC AGGAAGAGTGGGCCTAACAGAAAATATAATATGTCTGACAGGGTCGCAAA TTTACTTACTAAATTTGAAATTTTTTCGGACACTTTGGTGTGTTTTTCGT GTCTCAGGAAAAAATCATAGGGTAAAATTTTAATGAAAATTTTAGCTTGA GAAAAGAGAGATATGTTGTATATTTTTGGAAAGCTCTCAGAAAGTTAAGA TTAGAGATATATTGCGAGTATAGATGATTTCTCTACTTAACTCGAATTAT TGACCTTTATAAATAGTCTTTCTCAGCCAGAAACAGCTATTCTGTCCACT TTTTGCACTTTTTGAACCTCAATATCTCGAGCTAGGTAGAGAAGCCGTGT CCATGGATATTATAGACTATGTAATGACAGTTTGCTACGTCTGCGCGGTA AAATNCAAAATTTAATGAAAATTTTAGCTTGAGAAAAGAGAGATATGTTA TATATTTTTGGAAAGCTCTCAGAAAGTTAAGATTAGAGATATATTGCGAG TATAGATGATTTCTCTACTTAACTCGAATTATTGACCCTTATAAATAGTC TTTCTCAGCCAGAAACAGCTATTCTGTCCACTTTTTTCACTTTTTGAACC TCACTATCTCGAGCTAGGTAGAGAAGCCGTATCCATGGATATTATAGACT ATGACAGTTTACTATGTCTGCGCGATAAAATGTTATAATGTAGTCTGTAT TTTCAAATATAATCTACAATTCTCTCTTCAGACTTCATCAACGAGGCAAG AGATACCGTTTTCATCCAAGAAAGGTCAAATGAAAATATAATCCATTCAA AACAAATATCAAATAATCCAAACCAAGAGCCAAGAGTTGTTCGAAATGTT GAATTTTCACTCAAAAAAAGGAAGAACTGGCAACTGCAAGGGCAGCTTGA AGCTAAATTTGGTAAAACAGACAAGAAAATCGAGATTTTAGAGACTTTAC CGTATTACAATTCTCATTATCGTAGAGCAAGAATGTGTGTATCATCTGTA AAAGACTCGGAAGGACGCTCAGAACAAAATTATTCCTTGTAAGTATACCA GAGTCTCCAGAATTCGAACCTTTACTACTCGAATGTCTTCTTATTTCAAA TAATTTTATTCTTGTCCCTTAAGTCAACAATGCCTCATAAATCTCATGAT CTTCATAAGTCTTCGTGAATCGAAATTTTCATAACATATTTCAATTCACA TGCGCGTTCGAGTTATGGAGACTCCGCTTTATAATATAATTTACATTTTT TATGAGTATGCAAATTTCCTAAGGGGTTTTATCTAATTGACTACTTCAAA AACTTTACAAAAGCGAAGAAAATAGGACTTATCATTTGAATTTACTAATT TAGCAAACCCAACAATATCAGATGCGACAGAGAAAGTGACGCAGATTGCC AATTTATTATCAAAAAACCAAGTATGACAGCAACATATCCGTTCAAACTC GAGTCAGAAGTCAGAGGATCAAATTTCAAGAGAAAGTACCATAAAGACAG GAAATACAACTGGGGAAAGTGGCGGTATGGAGGAGTCTGGGATCCTCGTA TAAAGAACTCGATGACCTTAAGGCAGAACGTTGACCATCAAGTATTTGAA AATGAACAATATTTTGAAAGTGAGGAATCAGAATTTAATGCCGATGATGA AGAATTTGGTATAGAATATTCATATAAAGAACAGTATTTGAATTTGATGG AATTAAAATTAAAGAAAGATTCTGAAATCAAATCAACCCCTAAGGTAAAG AAAGCCAAGCGTAAATTCAACCGCAATCTATTAGTGGAACCAAAAGAAAA ACATATCATTGAGATCGAAGCTCCTGTATCATCTATTTACCAAGAATCAT CAGATAAAGAAGATAATGTTGACGTGGACAATTCAGTTATTGTTACTTTT AATAATGACAGTATTGAGCAAAACCTTTTACATGATGTGTATGGACAATT CTATGTTGAAGGACAAACAATGCAAAGAAAATTCATCATCATGAATGAAG TTGATCCGATGTCTTCAAAGATTTTGTTTGAAGTTCAATCAACGTCAGAA TCGATTTCAACATTTAAAGTAACATTTCTTGGTTTTGATGGAGACCTTGA TCTGGATATGCTCGAATTATTTACCGTTGATGAACCAATGTATTTCCACA ATTTTGTTGATATGTTCTATCCAGGGTTATCAACAAGAGATACTGAAGGT CCGACAATTCCTTTAAAAAATGAAGATGAAAAAATCAGCACAAAATCAGA ATCACAACTTATCATTGATTCAGGTTTCTACCATTATGACCAGGCTGAAT ACAGCAGCTCCTTGTTTCCAACAGCAACAGAATGCTCGAATTGTTTCAAC GAGATTTCCTCTGAAACGTACACCACCACGCTTAACAAATGTGGACATTT ATTCTGCAATGAATGCTGGGAAGAATACTTCAAATCCAAAATCACCAATA GATCAACCAAAAACATTACATGCCTTGCTTATAAATGCGAGTCGGTTATC GATGTTGTTACTTTACTATCTAAAGTAACTTGGGATTTGTTTAACGTTTA TATCAAAGGTTACACCAAACAGCTTATACAGAAATCTAAAAACATAGAAT CATGCCCTAATAATTTTTGCAAGCATGTTGTTATTGTAGATGAATCATTA ATCCCTCACGTTCCTAAAGCTTCGGAGATCCTGTCAAGAACATTGGAGGT CCAATGTGGAAAATGTCATCGGTCATGGTGTTTCACCTGCAAGAAAACAA CACATTGGCCTTTATCCTGTCGAACATATGCTAAACTTAATACGCTTACT GAAAGGTTAGTGAAATACGGTAATATTGATTCAACAGGGCGTGTTTTGAA GACGAACGTTCGTGGTAAACACTGTCCACGATGTGGGAAATTCATTGAGA AAAACGGTGGTTGCTATGTAATGATGTGTATTTGCTCAAACGAAGGGTTT TGTTGGAATTGCACAACACCCTTTAATGAACATGGTAATGGATGTCAACA GAGCACAAAGGAATATGCATTCATGCCTATCCTATCAGTGAAGGAAAAAC GATTGATGGAAGTGTTAACAGAATCGAATTCGAATGTTATTTTGAATAGA CTTTGGAGGCAGATATGTAACAGGAAATTAACTTTTAAAGTTATGTTCTA TCAATCAGCATTAGAGAGTATGAAGATCCTGAAGAAATCTATTAATGTGC TTCGAATGTTATCCATAAGTAAATTAGTTGAACCAAAGCTGACCTCACCA AAGATTATGTCGTATTGCAGAAGAATCAGCTTTTCAAATGAACTCTTGAT TCAAACCCTATATAGAGGGATATACTCTGGTAAAATGAATACAGACGAAC TTGAACTTCATACAGCGGATATCGAAAATATCCTAAAATCTATTTCAGCA AATATAAAATCGTAAATATTTTTACTAGTGTTTAAAAAATTGTTTTTTCG ATTTTGTAATTTTTTCTGTCGTAGTCATAATTAATTATACCGTGTTTCAA ATACACCTAAGTTAGTCATTTCAAATTTCTTGCTTTTTTATAATTCATAG ATAATATACCTAATCATAAAGAAAATTATTATCCGACGCGCGTAAATAGC GACATTTGATTGGCTTCTTTGATGTCCAATATTTTTAAATATATAGCTTC CATGGAGTGAGAAGGTATTTAAAAAAATAATGTGTCGCTGTTCTTCGCAG CATACCTGAACAAATGTCCGGATAATAATAAGCAGTTATTAGACTCGGCG AAGCCTCGTCCAATATCTTTTCTGGCACGCCCAATATTTTTGCATATATT GGATTCGACTTTGTCCAATAACTGCTTAATATTTTACTAGAGTTTACCAT ACATATTAGTTTCTAGGAAAGAGTAAAAATATTGTAAATGCTAAAAATTG TGAGCATCATAAATGAAGATCCAATATGCATTTAAAAAATACCTTTTAAA GTATCCTGAACATTTGCCGCGAATACTGAAAAGTCTTTAACCAACGGTGG AATATTTTCCCTCCTCTGATAAACAATCACAGAGATACCAATCAAACTAA GGACTTTGATACCAGTTATAAGTTTCTGGACAATTTGATCTTGTTTTTTA CTTTTCTCGATAACTTTATGGTAAGGAATTCTGGTGAATGTGGTCATTGT ATACAATGGAATCCAGTGCCTTGGTAAAATCCAATTCAAAAAACCATCAA AATATTTTCTTAAGACATATAATTTAGAATTGACATGATCCCTCATTTCT AAATAATTATACATTGCCAGATCAATGATTGCTTCAGCATCTGGGTTTCT TGTTCTCGAATATTCTTCCAAACCAGCCATAAAATCACCATTGTGTTTAT CAAGGATTTGATGTAGCACCAGACAATCTTCAAATCCACAATTCATTCCC TGACCGTAGAAAGGCACCATTGCATGAGCAGCATCTCCAACAATAACACA TTTATCTTGATAATGGTAAGGTGAGCATTTAACACTGATTAAATCACCAA CCGGATTGGTCTTGTAGTCCGAGATGATTTTCTCTTTGCCAATCAAAGGA ATTGAGTCAGGGAATTCACGTTCGAAAAAAGCCATGATGTCTTCTTCGGT TTTGATTTGATCAAAAATGGCGTAGGGCATGAACAAAGTACACGTGAATG TTTTGTTTTGATTGGGTAAGGCAATCATCATGAATGTACCACGTGGCCAG ATGTGAAGATAATTGGGAGCCATTATGAAATCACCATCTGATCCTGGTGG CATTTCGATTTCTTTGTAACCATGTGGTATATATACCTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003477TCONS_00003477Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003477-proteinTCONS_00003477-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:216739..222828 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0.1 0.03 0 3.69 2.81 2.84 5.86 4.27 10.39 8 4.82 6.72 6.24 0.99 3.22 0.24 1.03 4.71 5.19 1.08 1.38 1.69 0.99 1.26 1.66 8.32 4.1 1.38 1.29