XLOC_002026 (gene) - C. hemisphaerica

Overview
NameXLOC_002026
Unique NameXLOC_002026
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000030:585665..589744-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002026 ID=XLOC_002026|Name=XLOC_002026|organism=Clytia hemisphaerica|type=gene|length=4080bp|location=Sequence derived from alignment at sc0000030:585665..589744- (Clytia hemisphaerica)
GTCAAGGCTAGTGAATCAGGATCAACTGATCTTGGGCTAAATATTTTGAA
CCACGATTTTAAAGAGATCACTAAAAATGTTTTTCAGAAGATTTCAGCTA
CCTTTGAAAATGATGGAAATAATTTCGAAGAACTTTTAAAGGAATTGATT
GCTGACTTACGTAAGAGTGACATTCTTGTGCTGATGGGACTGGGTCGAAC
AGAAGGTAGTTTGAACGTATTACCTCCAGATATGTACACCTTGAGGAGCT
CCTTTCAACAAATTCATCACCCGAAATCAAAAATGACCGTGGGTGCACGC
GCTCTTACAAAACACAGTCATCGGAGCAGTGAATTATTCTGGGGAGTTTG
TACAGGGAAAGAGGAAGCTAAAAATGCGCATGCGCTAGAAATATTGGTCA
AAATAATTAGCGATTGTTCATGGATTAATATTCACACGCTGCCGCATCAA
ACCTACGTTTTAGAGATGAGATCTAGTGTTGGATACGGGTTGCGATGGAA
ACATGATGGGACCATGTTTCGTGGATTCTTGGAACCTCAAATGGAGAATG
GGCACGAGGTTGGCTGGAGACATTAATGCATTGCGCGTTTGGTCTGATTT
GTTTGGAAGATCGAGGTTATCTGAGAAATGGTAAGTTTATATACTTTTCG
TTATTTTCTCAGGTTAAAAAATCTAGCGGGGATAGTTTTGGAGTGCAATT
TTTTCCATTGAATTTTATCAAAATCAATTTTCTAGTGGGGCTGAAATTTT
TAGATTATTTTTCCCGCACATTTTGGCCAAAATTTTCGTTCATCGTACTT
TTTTTTTGCATTGTTCTCAGGTCAAAAAATCTAACGGGGATGGTTTTGGA
GTGCAATTTTTTCCATTTTAAAAATCTAATCAAAATCAATTTTCCAGTGG
AGGTTATTTTACCTTTAATTATTCTAGTATCTTATGTATTGGTTTTCGTA
ATATCGAAATTTTGATTTTGCTATTTTTTGATTGGTTGATTTTTGCAAAA
AGTTGCACATATGTGGCCATATTTTGTTGCTCTCCACCGTTTGGATTATA
AGAAGTAAAGAAACCCGTTTTTGTCTGCGTTTTCTTAAATTACTTTGGGT
TTTTAGCTTCTCTAAACTACAGAATCGTACAGCATTCTCAAATTTTAGTA
TGATTAATACTTTAAATGATGATTCACAACCCTGAAAATTTCTATAACAA
AGATTTATGAAAAATTAAAAGTCGAAAGAAAAATCCATATCTCCCAGGTG
TCCTCGCAGGAACAAAACGCATTTGTTTACCCCCCCCCCCTACGCAATTT
AAGACACAACTATGGAGTGTGTCTTTTCTCGATATAATTTTGAGATTTTT
GAATTACATGAAAGGTGTATTGGGGAGGTGTTCCTTGGCTTCTAATAAAC
TGCTGCCCCGGCGAGCACTCCAGTTTAGAGAACTACAGGACTAAGCTTTT
GAACTAACTGAAGCATCATAGAATAAATACTGTGTAAAAATTCAGAAGCT
TCTCAATATTTTTGTCACTCTTTACTCGGTTTACTCGGAGTCCTCTATTC
AGTTAACCCAGTTAAGTTTGGTGTTTATGATTAAAAAATTGACTATCAAA
TAGATCATTTTAACAATTTTACAATTTATGTAGTTTATTTCCCTAAGCCT
GCTGTGCAAAAAGGAAAAATCGAGATCACGTTAATTTTTATTGATGGTAC
TTGCTTCCAAATCTATTGTAAACATCAGAATCTTAAAAACATGTACCCAG
TTCTTAGTAAGAAAAGACCCATGACATGAAAGATTTCTATCTGAAGAAGC
TAATCAAATTTCAGAAAACACTAAAACTTTTTCCCATATCATATGACAAC
AATCAAATGACCAATGAATTTATCGACTTTCTAACGCTTTAATAATTTAG
TCAAGAGGATTACTTTAATGGTGTTTCAGAAATGATTTTTTGCCTTTCTT
CTTCCTACAGGAATTATATTAACTGACTTACCCTATGGATATTGAAATGG
ATAACTTATTCCCAGGTGATTTTATTCTTTAAACCTGTATTTGATTCATT
ACATTTAGTCTAATGGAATCTAGAAATGTCGCATTTGACCTTCAGAATAT
ACAGTTTGTTTATACCCAACTGGCACACAACGTTATTTCAACGTCTATCT
AATGTTCATAACGTCCATAATAACATTTGATGAACGTTGAAACAACGTTG
TGTGTCAGCTGGGTAAGAAAAAGGGCTACTTAATCGGTATGTATCGTAGG
TCGGCTAGGTGCTTCCACAAAAAAAAATTAAATAGGTGGATTTATCAATT
TTAAAGCTACGAGGAACTTGGATATGTTTAGAAATCTGCTAGGTAGAGAT
TTTAGCGAGTTTTTGTTTTTTCACTTGTGAGGACGGTAGAGTGCTTGGAG
TGATTTGGAATAACCCGTAGAATTGAGGAGGGTGAAGAAGTGCTTCTTTA
CCGTCGTCCTCAGTCGATCAGGATCTAGACACATACACAAACTCGCTTTT
AATTATAGGGGTGGCTGAATTGAAGTGGTTGCCTGAAAATTGCACACATA
AACATTTTTTACGAAATGTCCAAAGTATGAGGTAATCTTTGTATGTCTCA
GCCAATCAGAGCTTTATTCGACGTGTGTTCGTGATTTTTTACATGAATCT
GCTGATAGGAAATTTGCGTATTCACCCTTTTTTTTTCAAATTCGGGATTT
ATTTTATGTTTTTATTAAAGACCATGGTCGCACGCCACGCTTCGCTCCGA
TACGAAACGGTTCCGAAACACTGTGTGAACGTTAAAATTTAAAACGTCAA
AAAAAAGACGTTACAAAGAAAAACAGATCGAAACGGTTATGCTCCACTGT
TCATCGGAACGGAACTGCTCCGTTTTCTTGCTCCAAAACGTTCTGAAATG
AGTATGAACACTTTCTATCCGTAATAAATACCACACTGGAGCGATACGAA
ACCGTAATTTCTGAATGTATGGTCATAATTTCATAAACTTTTATCGGGTT
TTAGAATAAAATTTATTTTGTTGTTGTTTTCATGTAATTTTTGAAAACGA
AAGTGAAAATGGCGATGTCCTCTAGTCTACTTCACTGGACTTATCGCCAT
CAAAATCAACAAAAAGCAAAGTTCATTCAGAAGTAGAATTCACTTTCGTT
TTCTAAATTTTCTTCCGACTTCGCCACTGCGTAGCGTCAACCCCCCTGAC
ATTTGGGGGGGGGGTTTACACCCAAAATATTGCAAACAAAAACTGGGAGC
TAAAATACAGCCAAATATTTGGGGGAACCTGATATTTTTTTTTGGGGGGG
GGCTGGAATTTCAATGGCAAGGCTGGGGGCTGACTATTTCTTTTATTATT
TTTCTTTATATCACCACATTTCTATCCAAAAACCTTTCATTTTACAGTTT
ATTGATTCTGTTTGTTTTCGAACGGTGCAATGTTGTGTTTCCTGAACGCA
TGTTTTAATAGCCGTAATGAACTCTTGATTTTCAGTTAAGCTCTAATCGT
ATGCTTTAAGATTCAGTGAAAAGTAAGAGATCTCTTAATCTTTATGTAAT
CCTAAGGCATCTTAATGCGTCTCAGATCAACGGGTTGAGCTTACACGGTA
TTAGAGAATTTTTAATAAGCTCTACTAAAGCAACTATTGGATCCCAACTT
CCGTTACAGATTAGTTTGTGTCTATAAATATTTAAGGTACATGCTTTTGG
CTCGTGCTTTATGTCATTTTTGACCTACTGTATATTTACGGGTAGTAAAA
GATATGTAAGTTAGAAATGGGCCAATACTTTGGTTAGATTAAAATATTTA
GTATCATGGGTATCAGAAGGGGAACTACGCCCACGCTCCTTTATTCGATG
AAAATCCAATTTCCCGTTGGAAATCGAATTAGAGAGCATCAACTGTAAAA
ACAAAGCATACCTTTTGACACAGACTTCAGAATCTTACTTTAGTCATTAT
AGGAGATCCTGGAATGCACTTAATTAAGACAAAGTACTAAAGTGGTACTA
GCCACCTATTGGATCCCAACTTCCGCTACAGATTAATTCGTGTCTATAAA
TATTTCAGGTACATGCTTTTGGCTCGTGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003657TCONS_00003657Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003657-proteinTCONS_00003657-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:585665..589744 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.64	0.47	0.36	0.35	0.54	0.51	0.51	0.67	0.47	1.17	0.73	0.43	0.48	0.33	0.59	0.63	0.42	0.62	0.17	0.18	0.23	0.45	0.92	1.09	2.15	1.15	0.55	0.23	0.44	0.72