XLOC_002366 (gene) - C. hemisphaerica

Overview
NameXLOC_002366
Unique NameXLOC_002366
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000041:762112..770439+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002366 ID=XLOC_002366|Name=XLOC_002366|organism=Clytia hemisphaerica|type=gene|length=8328bp|location=Sequence derived from alignment at sc0000041:762112..770439+ (Clytia hemisphaerica)
GGAAATCTCTCAATATTTGAAGAGAAAACTATATCGCTGATCGTGCCATA GTGAATAAAAGTTTCTACCGGTAGGTATCTTTGttgaaaatcgaaagtga caaaGTCCACATTTTATCAGATTTGACTTCTTTTGCAAAAATCTTGCCAA ACACCTAAAGTCTTTGTAGACTGAAGAAAATAAACAACAGTTTTGGACTC TCACACAGTCACACAGCATTCTGTCAACAAGCAAGAAGTGAAGCAGCCAA CAATCTTGTTTATAATGACAACTTTACCTGGTAAGAATAGATTATTGATA GGACAGGttcaggggggggggaggtCAAAGTTTTCTGGGTATAAAAAAGC TGGTAGCCGTCACCCAACCAACCCTACAGCCCTATTTTTTCGCAATTACA ATGCAGCCAGTAGCTTTAGCAGACTTTCATTTGAATTGAGCCCAAAATCC AGTTTGTACCAATTTTTTCTCCCGATTGCTGGCAGGCAGGCTAGCTAAAA GTAGGGATTCAAactttgaatgaatttttcaaaaaatctaattaacttac gactttcaaataaaaggaaTATGGTAGACTAGatatagtcatctggggta attgCGGGACGATTTTGACTTATTTGGGCATTACTCTGAAAAAGTATTTA TCCTCAAGATCcgatcttttgatattttattcatCAAAAAGTATGACCTT GACTCTACACACGATTTATTAcagtgaagtcgggtaacttgcatcagtgg aggcaaacatgcatagccctcaaagaatgacctgtctggcagttacatca aaatgcctcgaaaatgtcaatatgaaaattgcgtaatcagNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaggccg agacaaactttcaataattggattgtaacatcgagttaagtctcttttgt taagtcaccaggggtaaataaaacagaccttgatacatttatccttcgtt tcaacttgacgattcgttcaAAACTCAGCCTcttaaatatttggggtagg taaaataaacaataaaatataattaccctttccaaataaacctcttcggt gacGAGCGCAGTCTACTCTGACTTAAttataaaatttatgtgatgggagt ttgacgtACTCTCTGTGTATTTACATTCgttgtaatgtaatgttgtttgg ggaattatgaagttctctggaatttcgattgcatttattcaggttgattt tttatgacttctaatggtattttttctaacgagtttgattaNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctctgttc tcacacttatgtctttttttttgcgtccttttccgtgattacttttattt atatttttaaagacagataagaaggcatattgatgtaactgtctggtatc attaaaattaaagttaaatgaaaacaaaaattgtagAGTAGAGCCCATCT GCCCctttctgacaaaaagaagtAACCCACATGAAGTCAAATTGAGAAAA TCAACCAAACGCGTTTAATGCTGGCATCGAATGCAGATAGTATATATCAA AAAACAAATGACTGATTATTGTTCTACTCATTGAAGATTAGCATCACTGC TTTTCTCACAATGCTCACTGTTGCAGAGGAAAACAAGACCCTTGTTTTGT CAGTAAACCTCaaccaaaagaaattgaagaaagaagTAAATGACCagttt tttgaagaatatttctgacaaaaggaagtaagtGATACctttttctgaca aaaagaagcaaaacagtcatttacttctttttgtcagaaaacatTCTCCA GAAAACTGTCAGTTACTTCTTTATTCACCCTTGGGAAGAAGTTATATCGG Atcgcccaaagttaccttcatgtttttattttattttcttatctctgatc cagtctttcttttttctgactgtctgagtttctgagacttagttttcAAT TCTGACTAAGTTTTCATACCTGTATCATATTTTGACCAACCACATCATCG CACCATGCGGGGTTTGAACCACCatcaaagaaagaccttcggatTCGGAT ACCAACGCCTTATCTGTTGAGCCATCGTCGCATAGCAaaaccacgcaatt cataacatattataccgaactggcaaaagacgggggcaatgatattataa tatgggtaaaagtaccccttttttaaacctgactgaaattcgagccgtta ctagcaaccctgcgaggcccaaggcgccgagtatgcacccggcacagtga caagccgtaaCTAGCAACCctctaactgttagttaatcaattccaaacaa caaaacccccagAAACACAGTGGGGTGAccatcagcgatccgtggataag aaaatgaaataaaaaagtgaaggtaactttgggcgaTCCGATATAACTCA CTCCACACCCTTGGGGTAAATATGGGAcaggtataaaatgttattgaaaa atccAGATATATATATTTCCAAAAGGTCATGATATTTGGGGTTTTGCATC CACTTGATGACTTTAAATCCAAGTGCTATCATTTAAAGGAGTTTCAACAA AATTGGTGACAGTGTCCCATTTTTACCCCAGCTTTTTCCCCATTTGGGAG TAATAACAGGACACTTCAAACAGTGATATTTGTATAGAGCAATCTAGACC AACTGAAGTAAATTAGATGCAAACCTTTGCAGGTTTTGAAAGACTTAGAG TGTAGTTATGATTCCATCAAGCtagaaaatcaagtttgtagttttcttat aaaaaataagcaCTTTTTTAAACTCAAACTTTAGTGTCCCATAATTACCA CAAGATTAAGATTTGACTACGGGGTAAATATGTTCTTGTTTGATAATGAG ACTATTATGATCTCAAACCATAGTATCTTGATGTCAGAATTCAGTCAAAA TTATAATCAAAGTGATTGCAGCTCTTCCTGACACTAAAGCTTGAAAAAGT TCCTTCTAAAActacaaaattttatttttatgatcacatgtgaaactttt gttgaaacatcaaaagtatatgCTAGAATGATCTAACTAGACATTTTTCT AGCCGCTAGAATGACctggtcaaataaaaaatagctTTTTATTAGCTGta aggttaaaaatatttataagtTTTTCCATTCCTTATCCATTATTTTCATG AGATTTGTTAATTTgttaatatttaaaagttcaacagaagtctgctctcc tccacacGAGTCagagttgttcactcggtggcGATTTCGCGAACCCCTAA TTCGACAGTCTGtcatttttacagctcgaacactgcgatggagagcgatt ATCTTTGGTGGAAATGAAACTTGAAACATGTTTTCTACCATAttcctttt atttgaaagttgtaagttaataaaaaattttgaaaaattcaatcaaagtt TGAATCCCTAATCCCTAATTGCGAATCCCTAATCCCTAGTTCCGAATACC TAACCGAGttatttttaataataaaaacGTGATAGATTATCTTGTCTCTA AATAATTGTTGTGGGGTAATTAGTGATTTGATAAGCTGTAgtgttctcca aaacaactaTATAGTTAGCAGGTTTCATGAGCTTTTCTATGGTataaatg aagactctccagaGTATTGGCGATgatgaagaaatagaagaaaaattaag aagTGAACCCTTGGACAATAGCTAGATTGTTTCATTTTGTTCAATTACAA ACACTTGTGAAAGCGCCAAATATAATTTTAGGCAGTGCTAAATTTCTGGA TTTAACTGTTTTACAATGATTTCCTAAGTGAAGAAAATATGGTGAGGCAG GGTAATTTTGGGcctcgaaaaatatttttttcaagaaatttttggCCCTT TAGAAGGTCCGAAGGTGGGAAGAGAGTCTCAGGTCCAAGTCTTTAAAGTC TTTAAAAAGCAAATTGCTTTCAGTGGACGTTGATGACGGCCCTTTGCAGA CAGAAGCTTCATATGTAGTATATTTCATGCTCTAATGAATTTGAAACGAA AATTCACATGCAAGATTTCTACATCAAATCAAGGACAATCCTTGGTTATC CTTTGGACAAAtcaagaacaaaacaaaatacaccTTGGGAGCAAAAATCC CTGGATATCAGGGATAAACTGAAATGTACTGGAATTGTACTTGATTAAGA AAACTCTATCCAAAAGTTGTCCTTGATTGTACTTAGCTTAGATTttacaa gtttgtgctgctccagATTGTCTATAGTTTAtaccttttttttatttcat tatacTCTTAGAAATTTAGGGATAATCCTGGTTTTGTATACCATGGATAA TTTGtgtaaatctttttttaattcttgtaaatgtttttgttttattcagA GAAAGCGACAAAgttctttgaaaatgtttctcTACTTCAATCATTTCCTG TATTCATTGGATACCTCCTGATGATATTATTGATCCCAGTTTGGAAGCGC ATTCTTCCAGTTGCGAACAATTTGAAAATGGTAAGGATTTTTTCATTTGG GAACTGTTTAATTTTGTTACTAGTTACTACTTATTGCTAGTTGTTATTCT GTTAGTTAAAATTTcccaaaagaaaggaaaaaataaataagaaatagtac acgtttttttataaaacattcaaaatttttgaagcctttggatgttctta actttttgggcttaaatgtttctaaaatgttctcaatttcaccatttgtg accatttttacctattttggccattgaagtcttatgttcttatatagttt gctcttataaaaaacgtgtgatGGGATAAAACTCTAATTATAAAGTATAA TTTTCTATGATAATTTGGAATTAAGAAGAGATTCATCTCGTGGTACTCAT TATTCTAAACTAGAAGTAAAACTTGATGGTTTTAAAAAGCAAtatgacac ccccttctcacagacccggtggggtcttttatcagccagtgggggtaaaa taaCCCCGGAAAATAACGGACAAAAATTCgattgggattgatattcccat cttttttaacaacattttttggGACCTGGTTCCACGCCGGTATGCATCTG TCATAAAATGATTGTGTTTGCACACCCCTTAATCCATTTTATGATAAGCA TACTatgtctggatgctttgagaacttcaGCTTCccaaggggcagacact tgcttataaaaaaacatgtattgctTCTTTCTTTAAGATTATGATACCTT ACAACATCATCTGTGTATTGTTGAGTTTGGCTGCAACATTTCTTCNAAAC ATGTATTGCTTCTTTCTTTAAGATTATGATACCTTACAACATCATCTGTG TATTGTTGAGTTTGGCTGCAACATTTCTTCTCTTCTATGGAGCTTTTTTG GGAAGTCATCTTTATGCATACGAAGAGAACCAATACATTGTATATGGCAT GGCAATTTACACTATCTCAAAGAATGTTGAATTGCTTGACACTGTTTTCA TGATTCTACGACATAAATATCGACAAATTTCATTCTTACATGTAAGTTTT GGGAGGGTATGCTTTATTTCATCAACCAATTATATTGAACTAGCCGGTTA CCCggccggcgtcgcacgccggttaagctgtacgccctaaaagtcctttg gatgttgaagctggcttaaaaaaacgatcaaatgaataaaaaaatatctt caaagtttgactctaaacCTTGAACCCTTCCCCGGAGATCTAATTTCTTC TTatgctttttatcgccctttgaatgctgttattgttcgacaaacttttt aatttttatgttttgatttacatttgaaatgttcttttctataaaagaaa cttattttgttttgaaaagaattcgaatgtcattaataaataagatcgtt tacattcgaaaacatttcaaacaaaagaaaagagaaaaacaggatcGGAC AAAGCTGggaagaaattaaaattactaaatgtagatgtgccttaaatttc gaaacaaaggctgaataaagtctaaaccaggctctgtccgacctgtcaat caaaacaaacttatcgagaacaaaacattgcttgcgaaatcgaaagtgac acacaaacagACAgaacggctattaatatatagattcaGAGTTTAACTTG GAAAGGGACATTGCTGTAAATTGATTTTGGATTTTAAACGCCTCATCCAG TTTATAGGGTACCCCCGATTCCACCATTTTGTCAATCTTTTCCCCACAAC TTCGAAACAAGAAGAAATTTTACCACGGAAAGTTTCtttgaaattgaaga ttttcatcAACAATTTGtagataaaattattttttcagacAGGGAAAAAC ACCATACATTTACAAGATCTTTTCTTTCGCTCATTTCTTTGAGCATTATC TATTCTAAAAGTAGAAAAATTAACAGATTagttaaataaatcaaaaaata taaaccagaaattcaaaattattttgaatatttttgggaaaattctaTTT CAAGGGACATtaacttttcaaataatttctaATTATTAGTTCCCCAATGA ACTTGATTAATCATAGATTCTCCTTCTTCCATTTTTAGGTATTCCATCAT TCCACCATTCTTGTTTTGGGTAATTATGCATTTGTTTACACATGTTACCC ACCCATAGCTGTACCAGTCGGGCTCAACTCACTTGTACACGTCCCCCTTT ATGCATATTATGCTAAAACAGCTATCTCACCTTCACTGCAAGTTTCATGG AAAAAAGCGCTAACCATTTTTCAAATTGTCCAATTTTTATTTGACTTGGT TTTCGCGACTATAGGGTATTTGTATCATGGGTTttgtatttattcaatca tGTATGGTGGTTCTATGCTGGTTTTGTTtagtaatttttattattttgct tACATCAAAAAGAAGAAGACTGTTTAAAGAAATACGttttaaaaatatga tttttgttgatttgataAACGACGGTATAATTCGTAGTCTCAATCGCAGA CCTGGCCTCTATAAGAAacctttttcgctagaggatgagcagaagcctat ataagggggggcgtacgggatttgctatttccgaaataccgaataatttt gctaaaatttccgaaattccgtaaaaaaaatACAGGgtcgatttccgaaa ttccgaaataccgaaataccgtacgccccccacataTAATTCGATACTTG TATGCTTGGAGAGCAGTTTATTTACTTCTTTGGAAGTAGTTTATTATCAT AATGTACATATCAAACATAAAGTATTTTCAACGATATCACCATGAAGGAC TTACTATTAAGTGCCAACACGTATATATGTGCGCATTGACCTCAGTTTGA TAGAGTATTATTCCAAGTATTCAGAGGACCAATTGTAATAGCAATGAAAC ACTCGTCCCGGGGCTCCAAAAGTCAAAACCAGAATACTTATATTCATCCA AGTAATAGAATAAGCATGCCAAAGTTCAGTCATTACCCTAGGTTGGtgta atgtcgacatccctcttctaatttcatcacccttttttagagataggaat aataggaaggtcagaatcggtgattgaaactaattttctttgcttatcAA TCAGTCGATGAGTCcgtcagtgattccgaccttcctattgttcctatctt taaagaggggtgtcgaaattagaagagggatgtcgacattataaaattga gaattttcacatgaaaaaatggctcaaaaggacaaatacttcttgtattt gcttgaaacatttgtcctttaacttttagcaggctaaaaagtgccataaa agttacatcttattcaaaagtttgaagttttacagattttctattttgtc aagaatttttcgcgagcataaactttcgcgaatggcccttcctagaattt ttaaagacatttactttcgcgaaaggggccaaaattcgcgaaaattgtga aagtttctgctcgcgaaagtttgtacgcctaaagtagcgTGCATTTTTTA GTCGGTGCTAATGCTAAGTTGAATTGTTGAATTTTAGGATTAGGGATTTA CAATATATGAATAATTCACTTAAaacttttgtttatatttttctatataC AGTGctaggaagaaaattttatactCAGACTGTTTTTATACATAACAGGA TTTTTATAAAGGACAATTTTTGAAGAGAAAGATTCACAATGTAgaagaaa agattgaaaattacATACTCAGtaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004260TCONS_00004260Clytia hemisphaericatranscript
TCONS_00004261TCONS_00004261Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004261-proteinTCONS_00004261-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:762112..770439 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.53 7.07 3.93 3.06 12.63 8.63 12.93 16.31 12.46 12.73 16.82 10.39 10.57 11.14 8.66 10.31 10.57 8.92 4.58 6.87 12.07 12.35 14.39 14.45 8.18 12.62 11.98 11.63 13.68 13.28