XLOC_002570 (gene) - C. hemisphaerica

Overview
NameXLOC_002570
Unique NameXLOC_002570
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000045:817656..826634-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002570 ID=XLOC_002570|Name=XLOC_002570|organism=Clytia hemisphaerica|type=gene|length=8979bp|location=Sequence derived from alignment at sc0000045:817656..826634- (Clytia hemisphaerica)
AGCGGATATACTCCTCAATTATCGCAAGAGAAACAGTTTTCACAGTATAT ATCTTCAATATATATTTTTTAGTAGTTTTCTTAAAATTGTTTCATCTCTC CCTTGGTGTCAATTTATGAGTTAATGGTTCATTATCGTTGGTTAGTGCGG AAATTCCGTGGCTGGAGGTCAATGTCGAGTTACAACTGCAATGAAAAAGA AATGGAATCCCAGAAAGTGGAAAAAACTGAAAATGTTGGCAACGACAAAG AGGAACTCTTTAATACTTTCTATAATAGTGTCACTTTGCATGGATTCAAA TTCTTATTCGAGAAGAGCTCAATGCTTCGTAAGGGTGTTTGGTTTCTAAT CATCATGGTTGCTTTTATGTGTTCTATTGCTTTATTCTTTGACCTCGTGG GTGATTTTCTTGAACGCAAAACGAACATTGATACTATTGAATATTATGAA GAAAACCATGAATTTCCAACACTGACCATTTGTCCTTACGACTCACAGTC TAAACAAAAATTAAACAATTTAACAGTCAATTACACTAAGGCTGATTTTC TGGACCTCGTCCAACGTATTTCACAACCAACCAGCGAGAATCTTTCTCTT ACACCGGAAATCCAAAATTTTCTAAAAGAGTTAGACACACGTAATGTTAA AAACTACATGGAGCTATTAAGTATGTATAATATGGACTTCAAAGATCTCA TCGATAACAGAGTATATTTGAACAATGAAACCTGTCAATATTACAGCAAA TATTGCAGTAAACAGGACTTCGAGACGGTCATTTGGAATAACCATCAAAC CTGTATCGAATTCAATTCATTCATTTCCGGTAAACCGAGTCTTGTTGTTG GTAAAATCGATAATCGGTTCCGAGGATTTCAATTGTATTTGGATCTCGGA CAAACGTCTTATTTTCGGACAGCTGATTTGCACGGTGTCATGGTGATGAT TAACAAGTTTGGAAATGCCCATCATTTGCTACCAGATAAGTCGTACGTTA GTGTCAAACCAGGCGAGATGGCTTTCATTAAATTGAAAGAATATGAGGTC AGTATGTGATTTAAAGGCTAAGAGTTCACGTTTTTATAAGAACATCCACA ATTTTTGAAGCCTTAGTCTGTTGTTAACTTTTTGAGTTTAAAGCCTAAAA ATGTTCTTAACATGTTCTTATTTTCACCATTTCATTAGTATTTTTGTCCA TTTTTCTAAGAAATTGGATGTTTTAGGGTCCTCGAAGCCTTAAAATACTC TTAACTTGCTCTTTTTTGCCATCGTAGCCTTATGTTCTTATATAGTTTGT TCTTATAAAAAAAACGTGCATCTCCTCTGCGAAGAATCCATATTACTCAC ACTTAACATTTTTTAGAAAAACGATTCGAGCCTTTAAACCACTTCTACTA GTTGCAGTCTTCGCCGAAAAATCTTTCTTGGTGATGGTGAACTTAAATTG AAGATGAAAGCTAATCATGGGTGATTAGGAGGACTCTATACTTTGTTTCA TCATTAGGGAACCGCCTATTATGACGTTTTTTCAATAAAAATATTTTCAG TAAATCAAGTCGTCCCCACGTAATCAAGGCTACTGATGGGCGTCAGTGAA TACCCTGCTGTAGGCTTATGCGAGTTCTCTCTCTAAGAAGAAAGGATGTA TTACTTTAAAGTACTGACTCACCATGAAAACCATTTTTCTAGACGTTGAT ATAGCTTAAGAAAAATCACGAACATCTAAGAAAAACCCCAAAGCCAAAGA AAATTTTCCCCGGAATGAGTTTACAGTCGGTAGAGTTTGCCAGTCTTCGA AACTCTCTCGCCGCCATTTTTTTCTGTCTAACGCCAAAACGTTTATATTC TTTCCGCCTTTGCTTTCCCTGTAACGAATGATATAACATCATCTAGCATT TTTCATGTAGAAATTCTGTACAATGACATTTTATCATTGACTTTTAGTCA TCACTGCTACCACCTCCTTACCATTCGAACTGTGGTACCAGAGAGTATCA TTTAATCAACAAGAAAAGACCATATACCAACACTCTGTGTAAATTTGATT GTATAACCAATCATGTGTACCAAAAATGTGGCTGCGTGGGGGATGAAATG AAACATATCAAAAAACGAAGTGAGTCATTGATTTATTAAAGTTATTACAT TTAAACAACCCTCGCTTATACTTATTATGTTTTTATACACCCCCTTTTCA CAGACCCACTGGGACCACTTCCCATTGGAAAATTGGTGCTCCAATTTTTG TCCCGAAAATAATCAAATAAACAAATCCTCACTGCAAAATATTATGTTAT TTCTCCATCCCCACTGAATTTTTGTGACGTGAAAGCAATAGAATTCAAAT CCCTAGTCATAAAAAAAAAAAAAAGTTGAAATATTAACCCCATCGAATTT CAGTCCATTATTTTTACCCCACTGGCTGAATAAACCCTACCGGGTCTGCG AGAAGGGGGTATTCTGTGTTCAAGTCGAAAAGAGACATCTAAGTTCTGAA CTTTCTGCTGAAAACTACGAAAAGAATAGATAAGGGAGCGGTCATAAAGT ATCTACTAGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNTTTTTTGAGGGTTTAGGGGGGGGGTTCCAATTTTTTTTTTGGGA AACTCAAGAGAAAATGTAGGAAGTCTAATTTCATAGTTTTACGTTTGAAG ATATAAAAAATTTTTCGGCCTTACGGCCCACAACTCATAATTTATCTTAT TGGATACATGTACATTTCATATTGCCATTATTTGGCCATCGTCGCCTTGC CCTTATTGGTTTGTAACATTGAGCTAGGTGAGGGAAGTAGATTAGTGGCT CTCACAGCTCATCCGAGTGGTTTGAAAAAGTACTTCCTAAAAGAAATTTG TCAAAACAGAGTGTCTTTTAGCTAAAATGGTGGTGAAAAATATTGAAATT CAAAACGCCTTAACATTTCAAATTACAAAAAACTAATTCCAAGTTTCTGG ACTCAAAGATTCCGGGCGTTACTTTCAACGATAATGCTCTTACAGTTTAA CATTTTCACTTAATAATGGAGGGCGCAAATAAGGACAAAAAATACCAGGG GCGCCAATTTCATAGTTTGCACCCAGAAAATTAAGCCAGGTCGCTACTGT TATACTTTAACTTAACAGGGCTAAACTATCTCCCTTACCTTATTTTGACA TAAAAAACTGTCATACAAACAAATAATACTCTTTGTCTCTTTGTACNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGG GGTGCGAATTTTTATTTGGATTTTTCAAAATATCCTCAACCCCTCTCTAG TAGATACTTTATGACCGCTCCCTAAGGTAAAAAAGGAGAAAATAGAGACT GTCTAAACCAATGAAGTATAAGCCTGAAGGGCTAGCGAATCTCTCACCTT TCTCAGGCAAGAAAAAGTGAAGCCTTAAAAAATGCCCTTTATTTTCGATG ACGGATTGAATCTAGCTTTTCTTTTGTTTTCGAGTGATATTTTTTTCGAA ATCAAGTGGTAAATTTTAGTTTCAATCTACAATTTGTGTAGAAGGTGGGT CTCAAGGCCGCCCAACTTTGTTGGCTCCAAATCCTACCAAGGAGATTCAA TTCTAGCCCTTCGGGTTTATATTTCATTGGTCTAAACTAGTTTTTATATA CGCACTACTTGAGTTTTTTGAGTGGGTAGAAATAAAAATATTTTTTGTGC TGTGTGTGTTAACCCTTTAACGACCGATGACGAGATATATCGTCATCGCG TTCCGTGCTAAAAATACTGATGACGAGATATCTCGCATATGCACATTATG TTCCAAGTATACCAAGGAATTAAAATTCGTAAAATATTTTATGTCCAGCT TCTAAAATAAAATATAAAATTGCAAAAAAAAGTTATTTTTTATTTCAATC ATGCTGATATGAGTCTTTTTTGTGATTCTTGACAATTTTCTCTATGTCAT TTTGTCTTATAACATTTTAGTTGTGTACTTCTTTTTTGCAGTCAGATACA AAAATTTAATATCATATGTGGAATATTACACGCATTATAAACGACTCCAG TCTATTTTAATGATGAATTTTTCCCAAATTTCATGTTTTTTTATTGACGA GTTATCTCGTCTCGCAGTCGTGAATCCCTAAAGTACTTTTTGCCGAATTG ATTCGTCATTCAGTCTTTTTGGCACGGGTCGTAAAAAAGTCGCGGTATTT TACCAACCACCTAGGAAGAAAGGCTCGGTATATTAAGAACAGTCAGTTCA AAAAGCCGCGGCATTTAAGGCACGGAAAAATAAAAAAAGCAGTCGTTAAA GGGTTAATTTTTTTTAATCAGAGAAATACGTTTTTTTGACTTTTTTATGT TGTATTTTTGTCATATGTTTTTGCTTTTTACTCCTTGATTATTTTTTCAG TTTTTCTTTCTCACTATCACTACAACATCTTTCGATTTTTTTTCGAACAG CTTGAAAAAACATAAATTTTTCCCATCTTAGGTGTGAAATTATGCACACT TGAAAAAATGATTTGCTACAACTATTACAAAGGTAATTAATCTTTTTTCA ATGTTTGAAAAGTTTCTCTGGTTAAATTTAATCTCTATATAGTACTGCAC GTTTTTTTTGTAAGAACCTCCAAAAATTTTGTAGCCTTTGGATGTTCTTA ACTTTTTGAGTTTCTAGACTGAAAATGTTCTTAGCTTGTTCTTATTCTCC CTATTATGTGAGTATTTCTATCTATTTTCCTAAGTAAGAAATCGGGTGTT TTAGACTCCCTAAAGCGTTGAAATGTTCTTAACTTGTTCTTCACATTTTT GGCCGTCGAAGCCTTACTGTATGTTCTTTAATAAGTTTCATGCGTGCCAC AAAAACTACGCTCCCACAAAGCACATGCTTATGGAAGCACAAGTTAGTAC AGGGTGTCCGGGAAAAAAGTATCGAGCTCGAACATGATTCTGAGTAGAAG GTTGTTGCGTGTGTTTAAGAAAATGTGAGAACTAGTTCGAGAGCTATCGG CCTTTTTGTTAGGTCATAAGCCTCAGAATTTTAACCATCCTCAACGTGTT CGCCGTATCGAAAACTGTCAAAAAAGTTTTACAGATCGAACACTAGCGGT CTCTTTAATCTCCACGAGCCCAAAAAAGAGGTCAGAAAAGGGCTTGAAAT TAGGTCTCATGGCTGTAACTTTAAATTCTGCTGGTAGTTAGTATATATAT GGTGAAGATCAGAGATCTGACCTCAAGGAGAGAAAGTGTTGAAAATACTA AATAAAATAAAGATGACATAAAAAGGGACTAATATTTTTATAATTATACG TTTTTTTCCATTTTTTTCCATTTTTCTAAATATATAAATCAAACCAATCA AACATTCTGTCAAGAACTGAGAATTTTATGCGAAAAAGAACCAACAAACC GATAGACATAAAGTTTAAAAAGCCAAGCAGAAAAACAAAACAGCAATCAC ATAAACACAAACACCAAAATCCACTCAAAAACCCAACCAATGCAATCTGG AGTCCCCGACTTGCGACAGGTGCAGCGGCTTTAAACATGTTTTAAGGACG TCCTCCCCCAGATTCCATAACCCTGAACCGACCCGCAGTCGTATATAGTA ATAATTTTAGTCACCTCGTCAAAATTTAGTCACTAAGGGCCGACTAATAA TTAAGACCGACTAAAAATTTGGGCAATTTCTAAATTTACAAGCAGATGGA AAATAGAAGAAAGCTTAAAATACTGGAAAATAAGGAAAGCTAATTATAAA CTTTTAATTTGGCCCAAATTTTTAGTCGGCCTTGATTTCAGTCGGCCAAA TTTTTAGTCAGCCTAAATTTTTAGTCGGCCCAAATTTTTAGTCGGCCCTA ATTTTAGTCACCAAGCCAAAATTTATTCACTTAGGGCCGACTAAGTTTTG GCCGATAAGGTAAGACCAATTTAATTATCCCAAATTATTAACGCTTTCTT TACACGTTTGAATGTCGTAGTTAACTATTTTCTAATTTCTTATCATGTGT AGCATTCAGAATAATTATACATTGCCACATGTTGAATTAGAAAAACTACG GTAAAAAAATGCCCTTAGTTTCGGGATTTTCAAATCTTGAACTAGGAGTA GCTCAAGTCTTTGAGTTTAAAAGCCCGAAGAGCTGGTAGAAGAGAGGAAA TCTTCAGCCTTTTCCAAGTAAGATAAAATTCTTAAGATTTGCATTGCATT TGGGAAGACAGATTGAATCGATTATTTTTTCCGTTTTCACGCGAGTTTTC TTTCGAAAGCTGGCAATAATTATTACTATCAACCCGCCGAATGTAAAGAC CATACAGGTAATGGATATCGGATTCTTTTCACCCAATGAATTCTTCTCTA GTCCTTTGAAATATGAAATCAATGACTGTAGCTACTTCTAGTAGCTCTAG CAGTACTCAGAGAGCTCCACTTAGAGGCTGCGTCTTGCACAATTTTGCGA CATAGAAATAGAATATTAGAGGAAATTAGTTCACTTTTACAATTTTGTGT CTGTTTTAGCATTGTTTATGGAAAAAAAGTACAAAGATTGTTTCAACCAA TGTCCTCAAGAATGCACTCAAACAACATATAAAGTGAAAAAAGCCACAGT AATGATCGGTAGCGATGAAGTGTACAAAAACATCCAGAGAACTGTCCCCT CGAAAGCCAACATGACCCTGACTGAGATTAAAGAATATTTCAGGTACATA TTTTTAGTTGGTAATTTGGGTTTTTGTCAACAAAAAATAATCAAATTACA TTTTAACAGTTCAGTCCTGGAATTGTAAGCAACAAATACAAACCTTTTTT GTTCATCGCGGAAGAATCCAGGATTGATAATACTTTGGTTACTATTTTCT ATACAGAAATGCTGATTAGCTCTATTCTCTACTTACTCAGGACTTTAAAT TTATCATTGCTGCTCCTGACGCGGCTTTTATCTTAACCAATTTGGTGGGT GGTGGATCAGTGAGACGCGGGCTTTTTCATTCAGATCGAGTTTTATTTTT CTTTCAGAGAGAATATTGTTGGTATACATGTTTCATTTTTTGATAATATC ATCATCAAAGAAAAGATGATACCTTCAGTTCGATGGACCTGTCTAATCGG TAAGCCCCCTTTCCATGTTTCGCTTGTTTACCTGACGAATCACTATCTAA GAGAAAAGCCCAAAGCCGAAGAAAATTCGCAAACGGGGTTTTTTGCCAAA AAGAGTTTCCAGTCAGTACAGTTGCCGTTTCTTCGAAACTCTCCCGCCGA TTTTTTTCCGCCATAACGCCATACCGCCATATTTTCCCGCTTTTACTATC ACTGTAATGGACGATAACATCGTGTATACCTGTTAGTCACTTATAATCTC TCTCTATCTACCTGTTTTAAAATAGTTACCAGTGCATCATGGCAGCACTA GATGTGTTTATAATCTGTTCGAATTAAAGGAAATTTCGAGTTATGGAGTA AGAGGTTTATAAGTTGTTGTTAAACTGAAGGGACCATAGTTAAGGAGACA TTCGAGCAAAGAAACTCTCACTGAAATCACCCCTTTGTGTACATTTAAAT GAGTGAATTCGAAGAGATTTCATGGGGCTTTATGATGTCAGACATTAAAT TTTCAAAAATAAACACTGATAATTTTTGTTTTTCTTTTTTAGCATCGGTT GGAGGAGGAGTTGGTTTGGGACTTGGTTTTAGTTTCATTACAGCGTTCGA ATTCGTTTTCTTTATTTATGATTACATTAAACTTTCATTGAGAAGGGTCA TGTCAAGCAGAAAAGAAAGACGAGACGTTATTCAAGTCGTCAAAATGAAT ATGAACGCCGATTGAATGGATAGATCTATTGATTTAAAAGCTCTGAAGGG CTAGATCCGAAACTCTTGGATGGGAAATAAAGCTACTTATTTACCATCCA AAACACGTAACGCTTGTGTTCATTTTCTCGCTTGAGAAAGGTTGAAGATT CCTCTCTAGCCCCTCGGGCTTCAAACTCAATGGATACACCTTGCTATCCT TAAAACATGAGAAGACTGGGTCAAGTTTACTAAGAAAAGTTGACGTCAAA ATCTGTATGAATTAACATCAATGCAACAACTTTAGATATCTGACGCAAAT GAACACATTCGTCATTCGTGTAGAAGAATGAAAAGGCGATAGTTGGAAAA CTATATACCTTATTACACGAATATCCAACAGTGTCAGACAATTTCAAAAA GTATAAAAAGAAGCATAACCCAAAAATAAACATTTCCTTGGATTTTTAAA TAAAAAACAACAAGAAAATAGAGTCGATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004576TCONS_00004576Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004576-proteinTCONS_00004576-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:817656..826634 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11 0.06 0.07 0.14 0.43 0.34 3.5 3.69 2.21 1.73 1 2.38 0.13 0.14 0.23 0.44 0.35 0.44 0.29 0.15 1.18 1.39 1.26 1.03 0.5 0.71 0.27 0.19 0.48 0.5