XLOC_002602 (gene) - C. hemisphaerica

Overview
NameXLOC_002602
Unique NameXLOC_002602
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000047:72582..77241+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002602 ID=XLOC_002602|Name=XLOC_002602|organism=Clytia hemisphaerica|type=gene|length=4660bp|location=Sequence derived from alignment at sc0000047:72582..77241+ (Clytia hemisphaerica)
CAAAAATAAGCCACTGTCGGGTCCCTCTTGTCGTATTCTTTTGCCAGTTT TAGATAAgaatttatttgtttcaaaGTTGGAGGTAGCGCCGCCGCCATAT TGAATCttcgaaaagtaaaaaaatgcttGCGTAAGCTAATTTACATTAAT TACGTCATCGGTTCATCGTTGTCACTAACAACAGGCCCAAATTACAGAAA CAGAAAAACGAAGAAGgaaacaaacaacaacaaatcacTTATGAAAATTT TAGTGGCCGGGTGGACTGGGAAAATTGTTGGGTCAGTTTTAGACTAGGAG ACCCTGTAAAGGTAGAAAAGTGTTTTAATTATGGCTGCTGTTTGTCAGCT TTCAACGGCATGCTCATACGAGAGCAAACCCCTTTTTGCACAGGGCTTTA CAACCAAATCATGGATGAAAAATGTTGAGGTAAGAATAAAGCTACTTACA CTTATGCATGAACTGGGATCATAATGTAGATATCCTTTCATTCGACAAGT TATTGGTAGACAAAAACTGTGGAGGTGCGGGGGATCGAACCCCGggcctc tcgcatgcaaagcgagcgctctaccactgagctacaCCCCCGGCTATTGT TTTAAGGTACTAAGTAGATAGGAATCCTTAACATACTATTGGCAAATTGA AGCTACGATAATATTACTATTTGATGCCAATTCTGAAATTATGACCGATT TTTTGCTTAATTCAGATTTTCTAGACAAGAAAGCCTAATTTTACGTCTCC GACAAAACGGGGACAGAACACAGGAACACATAAATTAACTACAATTTAAC AATTTAGTTCAAATTTTCGtatactagggttgcgagctgacggggggtgc cgcccaACTTTcaaccctcggacccttacctaggctgctggcatccacta acggattcgtgctccaggcacgacggaagctttttatatctggtacggcg aatgaggaaatttaagcgattttataccgatttgaccgacgaagaggaaa acttcgggtatttttgtgaaaatctggtacNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNccgcaaacccagtgcccccccccccgggggtctg cgattcagactaacccttaccgggactaaaaaggagaaaacaaaggaaaa ttttgtgaattttacgacccttacaggtacaaatttgaccaaatttcgat ctttctgggggtaaaaagttgaaatttttcaatttttcctacCCTTACTT AGtcggactgaaatttgattttctgaatttcccgacccttagcgggactt tggaaatccaaaaaaggtacccttaggcagtggcggcctggcagggggtg cagggtgtgcagtgcaccacccagaaagatctgaaaggggcgccaaaaga gcttttcaagggggcgccaaaatttaattgatgtttaattgggcgACTTG GCGCCCTTCGACAAGTTTGTAACGCCTTCCATAAgtgcaatgttaatttt ttcgcctgcggcgcttcgttttattttacgctCTTGCATCCTTATTCTCT TGACTTTGTTAAAAACTACTCTCAACATTGAATCgcaaaaaagtcaaagc aaAAGAAGTGTTGTGAATCCACTAGGGGCTAAAGAGGATCCTCAccttca aaatgagagattgccaaaaaaTCGAAACTTGATAATGCTcactgtggttt ttgtggtcttatgctgactaactttctcctttttagaagatcttttaagc tgtttgacgtttcttacatcaaaattttttgcctgcggcgccaacATTCC AAATacccttattcctgccaactttcaaaatttggggcccttttttagcc atttttctttaatggagagtaaagtaagaccagcggCGCAAAAGTTTTAA GGTTATCAGGTCATTTTTCTGATgaagttttagaaaacaaaaatatagac CAAATCGCCTTGCTAGTCGACTCGCTACctttaaaatttccatttcaagt atcaacagctcatgttttttatttgaagagcTTTCTTTTTGGTGTTAAAT CGGTATAAGATAAATTGAggcatttttagacattttaaaagttgaaaata ggaaaaattttccttgttcAGAAAACTATGACATTTAAAAttataacaag gaaatagatatcaagttatGATTACCACAACCTTCGTAtgaataaaagtt tttaaactCAAAGATTCTGGGCGCTACTTTCagccagtcactgctcttac agtttaatatttccacttaataatggagggcgcaagtaaggacaaaagta ccaggggcgccaatttcatagcttgcaccaccaagaaaattgaGCTAGGC CGCTACTGTACAccaatttttcgagtgatttgcccctcgacCCTGGACGT CACAACTCCTCACTATAGGAGGATACAGAttatttctggaagagcccaat ggaAGCTTCTTGGTTATATTCTaaaaagaattataaatttgTTCTAAAAC TTACTAATTTCATGCAGGCTTGGATTCGCTACATCTGGTTGATGAACGAA AAATGATCGAAGTTCGAAGTTCTTCACAAAGACCATCAAGTGATCTGGAA ACAGATGATTCGATTNTTAGCTTTTATAGTATCTTTGcagtaagggtacg attttgaaaagcagattttgcgcggcacataccgtcgtttctaAATCGAG TGCCCTCTTGACATTTTTGAGACCTTTTGAGAGAGTAACctatgaatttg tacccctttgactTTTGAGTTATGAAAAAAAGGGTAACCTTTATGGCTTG CACATACCCGTCTGCACTGCCTATATAAAGTCTCCCTCCCCGAGCAaaaa tttggagtaattttttttattttcaaaattttctttatgCGACGTCGTCA ATATATTTTCCCGAGTTTTTCTAGAGATCTTAataaaatctccaaaattt tcacagttccaaaaattttgatttttaggttGTTGGGCCACCCGAAGCTG GAGCATTCAAAAAACGACCCGCAAAACAAACGCAATTCCGTAGATTCTAT GATCGCGGTGATCTTCCAATCGCTTTAGAACATGATACCAAGGGCAATAA AATCGCCTGGAAAGTGGAAATCGAGAAATTAGATTACCATCACTATCTCC CAATGTTTTTCGAAGGTCTCCGTGAAACTGAACATCCATATGAATTTTTT GCACGCCAAGGAGTTCATGATATGTTAGAACACGGCGGAAGTAAAATCTT ACCTGTCGTCCCACAACTTATTTTACCAATCCGTGATGCGTTGGATACGC GCGATTTACAGGTCGTGTGTACCACGTTGAAGGTACTCCAACATTTGGTC ATCTCTGGTGAAATGGTCGGAGAGGCCTTAGTACCTTATTATAGACAGAT TCTACCagtgttaaatattttcaaaagtaaaaatttgaattctgGTGACG GTATTGATTATAGTCAACAACGCCGTGAAAATATTGGTGATTTGATTCAA GAAACACTTGAAGCTTTTGAAAGACACGGTGGCGAGGACGCTTTTATCAA TATCAAATACATGATTCCAACTTATGAGTCATGCCTACTGaactaaaatt ttaaagaaagcaAGGTtcctaaattatttttttattatcagaaatttcta aattatGAAGGGTTCAAGGTTACTTTGAAttgtatattatatttttatat tctaTTTCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004615TCONS_00004615Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004615-proteinTCONS_00004615-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000047supercontigsc0000047:72582..77241 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0 0.05 0.1 0.65 0.41 0.77 0.22 0.74 0.95 0.74 0.47 1.82 0.98 0.42 0.36 0.62 0.68 2.3 1.9 0.83 1.1 0.47 0.5 350.83 198.12 0.37 0.38 0.08 0.13