XLOC_029728 (gene) - C. hemisphaerica

Overview
NameXLOC_029728
Unique NameXLOC_029728
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_114:4217..13313+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029728 ID=XLOC_029728|Name=XLOC_029728|organism=Clytia hemisphaerica|type=gene|length=9097bp|location=Sequence derived from alignment at scaffold_114:4217..13313+ (Clytia hemisphaerica)
TTACTATTTACGTGTAAATTCAGCTTTATTGAAAATCACGAGAAGGTCAC ATGACTGACTCATGAAACTATACTATTCAAGCGCAGCCAccaagctatac tttaaaaggaCTGGAAAATCgtggaatttttattttttacttttattact AGCTTGGTTTTACTTTGACTATTTAACCAACCGGTGTAAACAAAGGATCG CTTTCCGAGAATTTGAAAAGTGAAAGGTGCTGTGTTTTTCGGGAAGTGAG AAAAAGTCAGCGAAAATGAAGTCCCTTGCCATTTTTATCACTGTTTTAGC CCTGGTTCATGGAGAAAtcaaaaggtattttatttatttcaatatCTATT ACTATTGTATGAAGACTTGCTGTTGCAGAGACAACAGCTGAGTGAGATTT TGGCTAAACAATTGTTCTTCCTTCTCAAtaacaaaacatcaaaatactcc atttttgtttttcttcactGTTTTAGATGGTGTGTAGATCATCTTAAAGG GatcgaaaaaaatctttaataatGTGGGGAGTGGCTCATTTGACAGTTTG ACACCCTTGCAATTTGTAGGCCCATTGTATGCTTATgctttagttttgtt ttcaactgggtgtttttgttggaaatataTACAGACACTACAGCAGTAGC AAAATCCAGTCCGGAAATTGCGGCTTGTGCGCCGGATATCTCTGGCATAG ATTTGAGGTTTGAGATCTGCTGCCTTCAACTTTTCCNAttatttgcattt tttttattttcactgtcAAAAACTAGTTCCAGCAAAAATTAGCTCCCTTT TAAGATGCTTTCACATCAATTAGACAAAATGTTTTAAGTTGGGGTTATGG GGAAAtgctaattttcaaaaactttagatTGTTTTTTCACATACATATAG ATTTTTTTGTTGGGTTATGCACTTTCATTAGAAATCTAGTCCTAGTAATG CTCATGCTCCCCACGTGGTTTGATAATATTGCAACATTTTAAATCAATGC ACTAATGTAATATCTATTGCTGTGACACATGAATTGTTGTCTTTAGAAAC TGAAACATGATACTTATAACCATTCAAACAGAAagcattttttctttgtt tatgttAAAATATTTGCACTTGTAATTTAACATGACAATTACAATATTGA GAAATATGCATCTGTCATTTAAAACATCATTTTACAAGGTCAAACTGATT GCAAATAATATTCAACCCTGCATCAAGAAAGAAAATCTTGATATAGTCCT AACAATGGTTTCTTATTAAAGAGTAGATAATTGATTGATTAAAGTTTTAT CTCCATATAACTGCATATGTAAATGTCTCTACAAATTGAATCTTTAAGCA CGTACGTAAGCAATTTGTCCCTGTGTGGCCCAAAATCGAATTAAAAATTC CTGTAGACTACCAACATAACCACAATGTTAGCCAGTAATGTAAACTGGCT CCTCTGTATACTATCAGgtacacgtttgttttttttaagaaacacacttt taagaaacatgaggctcagaatgcctaaaaactaagaaacatctaagaaa catgctaaggctgaaaatgaaaaaatgacatttttaattcgtttttttaa gaaccttcaaatcaaaacatggaaaaataggctgattatgtcaaaaagtt tagaaacatgtaagaaacatttaaggctcaaaaggctgatttcttaagaa acattgaggctgcttggtaaaacTAGTTTCTTAaaaaaaaaaaaacgcgt aCCTAATAAGCATCCCCTgctaataaaatttttgaaaaacccAAGAGCAG GACTTAAGGATTTTTgggaaagttccctcttttgccctcctttttcaaat tttccacccaggaatGAACATTTCCACCCAGCCAGGCCGCTTATTCCTAA CCCCCCTCTCTCCTTGTTTGAGAGTATGATCTGAGCAGAAGCGGTTGTTC ATTCGTTTTAGAGATTCACTATAATTTAAATCTTTTAGGCCCAATATTAT GGTGAAATAAGCATTGGAACACCACCTCAAGCATTCAAAGTTGTTTTCGA TACAGGATCATCAAACTTGTGGGTCCCCTCATCACAATGCCACTTCTCAC CTGCATGCTGTAAGTTTACTCAAAATTATGTTACATGGCTACTGTTAGCT GACTactgaaaatcataaaaaaaattgtaccgggtgcgccacaaaaaagt ttctctctttgaaactgattttctcaaaatctaagaATAAAGAaaggctt tacatgattaagaccatttttcagtaattaaacaaataaattttgaaatt taaggaaCGGAAGGGTTTGAAATGTTCATCAAAATCCTTTCAATTTACTT TTAACGAAATTTTCCTcatatttttggttctagactggatataGTCTATG TAACGGtggatgtacctcgaaacccatatttgatgtatttttattgattt taggaaaattagttttaaagagagaaacttttttgtggcgcacccggtac caTACAGTCCCGTACTCAAACACACATATAGAAATAAAGCCATTGGATGT TCATTACATTTTGTCAGTTAGAGTACAATTtacgtaaaattttatttaaa ctCTAATTTATCTGACAGAACTTTGAAGTTCAAATTGGTATAAATTCCTT CCTGTATTTGGTTTAAATTCCTTCCTGTATTTGGTTTAAATTCCTTCCTG TGTTTAACCTTCCACTTAGCTGACATCAAAACTGTAACAATTAGTATAAT TCAAAGCAATAATCGTATATGGTGGTAAATTTATAAAGCATGATCAATCG TGGCTGTAAGCCAGGATACTAATAATTTTCCATTTCCTTTTCATTAGTTT TACACAGCAAATACCATTCTGACAAATCGAGTACTTACAAAAAAAATGGT ACAGCCTTTGCCATTCGTTATGGAAGTGGAAGTTGCTCTGGTTTCTTGAG TGAAGATACTGTTACTGTAAGCCTTATTactttacttaattttgcagtTG TTTGCAGGGTTGTTGTTTGTCTGGGAAGGCTTTACTTTAAACTTTACTTG ACACTTCATTGGTTCTTTTTTGCCAGACAATTTTGTTCCCACAATTTTGT CAGAAAAATTTACCGAGGGCAGCTAATCTTCCTAATTTCCACTTACTGTG ATATCATTTCTTTTAGGAAAACTTTCATATTACCacattttcaatttatt ttttataggtTGCTGGTATCAGTGTGAAATCACAAACTTTCGGTGAAGCA AAAAGTGTACCAGGAGTTGCTTTTATTGCTGCCAAGTTTGATGGTCTGTT TGGTATGGGATACCAAGAAATCTCTGTTGATCACGTCGTCCCACCATTTT ACAACATGGTCAGCCAAAAGTTGGTCGATGATGCTGTCTTTTCATTCTAC TTGAACAGGTTGGTCTCAAATATTATTCTGCACTTCTGAAGAACAGCTTT AATATCAaaacagttgactctcgcttattcgaactcgGTCTGGGAATCTT GTTTGTTTGAGttacagagagattcaaattgtagaaagtattttaagtgA GTTTCTCCTCGACGGGGCCTGGTAATAAGTTTGAacaatagaagttcgaa taagcgagagtctactgtaatttcttattttcatgcTAGCTACTGCTTTT GATATTCATAGCTATTTTTTTAGTTCATGAAGAATGAAACTTCTTCACAT AAGAGACTCATGGTTCCTTATTAAAGAAGAAATTGACCCCTTGGTAAAAA ATAGTGTAGGTGCAAGATTACTTGGTGTTGGTGGGAGCAGTTGTTCGGGG CAACTGTCCTGTCATGCATTAAAAACAACTCCACAATTGTTGTATCAAta gattttataaaaaaagaaacttttctcAACTCTTCTAGAAATGCTTCAGA CACAGATGGTGGTGAATTGTTATTGGGAGGTATCGACCAATCCAAATACA CTGGAGACATGACATATGTCCCTGTTTCCATCAAAGGATACTGGCAATTT GACATGGACAGGTAAAACTTTCATGAAAAGGAATTGATTATTTCATAGGA AACAAAGTTTGCAACCATCAAGCTTTGATAATGATTGAAAACTTTAATCa atgttttgaaatctttgGAATCTCTTTGTTTGAAATCGTTAAATTTCGCG TATTAGCACagccgcgaaaattaattctaaAGTAATCGATTTCATATTCC TTTGAAGCATTCAAATCAACGGTGAAAAAGTCTTCTGCACCGGAGGTTGT CATGCCATCGCTGACACCGGAACGTCCCTCATCGCCGGACCATCGGAAGA GGTCAAGAAATTGAACGAACAAATTGGAGCTACACCAATCGTTGGTGGAG AATACACTATTGATTGCGCTAAAATCCCAACCCTCCCTGCTATGGACTTC GTCATTGGTGGAAAGAAATTCACTTTGAAAGGAGAAGATTACATCTTAAA GGTGAAGATTTAAACTTCGTTTATTAATGCATGTGACTAAGCCTTTTTCT TTGGGGTTTAGCCTTTTCGTAATATCGTCTCTACCAAGTTCTCGTCGAAG GAGCAAAAAtaatgaagcaaaatttagaTGCATTTTATAATTACTCAATT ATaatatttccatttttctttGGTAGGTTTCCACCATGGGACAAACAGAA TGCATCAGTGGTTTCCTTGGAATCGATGTTCCCCCACCACGTGGTCCCTT GTGGATTTTGGGAGATGTCTTCATTGGTCCATACTACACTGTCTTCGATC TTGGTAACAACAGAGTTGGATTCGCCAAAACCAAATAATTTGACATGACT TTTTAGTATACTGTATACACAAAGTCCCTCAAATAAGTCTTGCAAAAACT TGGCTCGACTTTGAGTATCTTNTAGTATACTGTACACACAAAGTCCCTCA AATAAGTCTTGCAAAAACTTGGCTCGACTTTCAGTATCTCACACTTGCAC Tttaggatttttcgttttttctattttattgatgtaatattgattctttt tgttttttaatggttcaattgtttttcattcgtattttgtatttttttaa gaatttaggTTAAGCTTTGGTACAATATATAATAACTTTGTAAAACAGAA ATCGATACAATACTGCTCAGTTTTTTCCCTGTTTGTAATATTTCGACAAA CGCATCTCAAGTTTTTCGTGTCTGAAAACTTGGATAGATGTCAAGTAAAA GAGCTTTTTGAATCAACCTTTAAGTAATCCCCATAGAAATCTTTATTTTG GTCTTTGAAATATGATTGGGGTTAGAGAACTAGGACGAGAGGAAGTGAGA AATGAGAAATCACCATGTGACCTGTACAAACACTGACATGAGCAGGATTT TCAGCCCGTGTTGTTTTAGTAGGTTGTGTGAGAGTAGAGGGACTCAtcga atgaaaaagttatttttacaTCCAAAGTTATGAAAACAATAATAATTAGT AACAGTCTATCAAAATAATGTCATGAAATTTTCCAGAGTGAAATCTTTTC GATTAAAATATATGTTGTACACCAAACTGTTATGTTAAAATGTTACAATC GTTCGCTTGTATAAAACGTTATTGATATAGTTATGTAACGAATTCGGTCT TCTTGGATCTGTGGAATTAGTCTAACCTGCCAAATGATTGTGTGTGTGTG AATTGTTGGAATGAGGGAAATAGTCAGCGTACAGATAGGACAATGTGGAA ATCAGATTGGTGAAAAAGTATGGTTTATTTTGATGGAAGTTTTCttcttt acaaataaaaatattcctGCTTTATGACTTTTTACATTGTTATCAGTAAT TGATACTGCGATCAACTTATCGCGGATTTGAATCCATTCGAATAGCAAGT TCTCAAACCCTCTATTATTTCTCTGAATTGCAAAAACTTTCGAACGCCTA AATATTTCTGAAATACACCCCTTCTCGcaaacccactgggaacccttccc gctggaaaaattggccgTGATATCATCCCCTGtagaaaattatcctccaa ctTTTGTCACCACTGTAAATAATCAGATATGTCACAAATCCCCACTGCAA AACGTTGTGCTATTTTAcccatccccattgaattttctggctagaaaaca atgaaattcaaatccccagccatttaaaacatgggaatatcaatccccat cgagatTTGGTCccttatttttacccccactggctgataaaattcCACct agtctgtgagaagggggtgttagaATACACGATTTAAGAACGTTACCATT GTAATTAGAAGCTTAACAGACtgtgaaaaagtttgaaagctTCTATTGAA TTTCTAATTCTAGTTTTGGGAGACGATATGTCTTGACCATCAAATTCCAC TGGATGGAAAGATCAGCCAACAAGCACTTTCTGACCCCCGTGAAGATATC CTGAAACCTCGTGGGAAGTATGAAGTTTACTTTAAAGAGATTGGCACATA TGGGGGTAGTGAAGTGCAGTTTGTACCACGGAGTGTTTTGGTGGATATGG AACCAGGCGTTTTAGATTCGATTCGTGGTGGGAAATTGAGAGATCTGTTC AAGCCTGACCACATGTTAAACGGTAGGTCCTTTTATTTTGCTacttaaaa atgacaaattcaACACCTTGGGACAATTAAGTTTTAAAAGCTGGAAGGCC CAGAGAGGAATTCTCAACCTTTACGTGTTACTGATTTGCCCTTCAATCTC GATGCTTAGGACGGTTAGTATACGTCTAATTTCCTTTTTACTTGGAAAAC AAACGTTGAAGTTCTAAAAACACACAAACTAGGAGGGAAAGTGAATTCCC TAAAATCTTAATGTGCATAAATGAgaagtgtaaaaaacctttctcgGTCG ATGTCCTTCTTGGTCACATTATTTTTACAGTTGATCCATTACTACCAGGC AATGCTGTTTGCTGCTTTATACTCTTTATCTCGCTTGCTTTTCCTTTATA AAGAGAGAAACATTCAACTTATCTTTTTTATCCTGCCAAACAGGACAAGA TGGTTCATGCAACAACTGGGCCAAAGGTTACCTTCACCAAGGTGGAGAGT ATATCGAACAAACAATGGAGATCATTCGAAGGGAGTGCGAGTCATGTGAC TGCATCCAAGCTTTCCAATTGGCTCATTCCGTTGGTGGAGGAACTGGGTC GGGATTCGGTTCCTTGTTACTATGTCGTCTCTATGACGAGTTTCCCGACA TTTTGCTCATGAATGCCAGCGTTTTGCCGTCGACTCAAGTTTCCGACGTC GTTGTTGAGCCATACAATACAATCCTTAGTCTGGCATATCTGGTGGATTA TAGCAATGGTGTGTTTTGTATAGATAATGAAGCGTTGTATAAAATCTGTA TGAATAAACTAAAAGTTGAAAGGATTAATTATGGCACGATTAATGAGCTG ATTGCTTCAACTCTCGGTGGTGCAACCACCAGTCTGCGCTACCCTGGCCA GGTAAATACATATTCTAACTTTCTTTATCAACATCTCATCCGAACATTAT GTtacttttcatattttcagtAGGACCTATTAGAGAGCGCTGTTATCTTG TTCAGATAAAATATATGAAATACCTTTATCTATTGCCTGACGATATTTTT TCTCCTCTTTCATACCCCTATTCTCAAATACCATTCGAAGCCAATATAAC ATCATGTTAACACTGCTCGTCGAATTTTCTCATTGATGTAGATgtaaagt aagtatattcatctggtggctgaaTATCTACACATCTTTACGGGATTATA AAGCAAAACCTTTTACAAAACCGTCACACTTTCAATCATCTCACTctaat aattctcttttttattcttttcagcTGAATTCGGACGTCCGAAAATTATC AGTCAACATGGTTCCCTTCCCACGTCTGCATTTCTATATGACTGGATTAT CCCCATTAGTTCATGATTATGTGAAACCATACCTCAAGAATGATATTGCG GAGGTAACAAGAGACTTATTTGAACCTTCAAACATGTTGTGTGATTGCGA TCCGAGGTCTGGGCGCTACTTAACATTTGCCGCCATTTACCGTGGTCAAA CGAACACTAGAGAAATCGAAGAAACTattatgaattttcaaaataagaac agttcATCTTTTGTGGAATGGATCCCACACAATGCGAAAGTTGCGACTTG TGATGTCCCATTGAAAGGACAAAGATTGAAAGCAACTTTCATTGCTAATA ATACCTCAATACAAAACATTTTACGACGTTCGAGAGACCGTTATTTCAAG ATGATGAGACGTAAAGCCTTTCTCCATTGGTACACAGCACAAGGAATGGA AGAGCTACAATTCATGGAGGTAATTTATAGACATACATATCTATAGACAT ACTATTTACgattcccttgagaacggaccgagtccgaaacatatcgggaa aaatcaaaatataatttttcgtCATCTATAAAAAGTAAGATCAGTCACAA TATTTTAGCAAAACATTCTGTTATTGATATTTCAGGCCGAAGCAAACATC GTTGACATCATCTCAGAATATGAACAATATACGCATGCGCCTGTTGATGA TGATATCCCGTCCGAATATTGTGAGCTTGAAGATTCACTAGAGGAGTTGG ATTCAGGTTTTGGTGGGTTATGACACTGTTGAGATGACACGTGTATAGTT GAGGAGACAGCTCGAAGAATGGCTTTTTATCGTTGGTCAAATCCATTTGG TAGAAGACCCCGCAACGATAAGATAGCTTTACACTGATAAGCCCACTATC GTGATCAACGTGATGAAAAAGTCGGTGAAATTAGTTTAAAAAAGACAATG TTCCATCTATGAATAACAATCTATTCGATGAAAACAACCCCTCTACTGAA AGGATGTGCCAACGAACAATATGAAACAGCGTGGGGTGTTTCATATTATT AAAAACGTTACCTTCCATGACAGCATTACAGAACATATGTACTGGGCATT AACCAAAGTCATTAAAAATAAGACATGATGAATTTATTCCGTACGTTGAC ATATTGAAGACCCTTGTTTACATATTAAATTGAGACTTGTGGAATTAAAG CACTCATCTGAAAACATGCATTGTCTATAAAGAGAAgtttaatataa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046579TCONS_00046579Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046579-proteinTCONS_00046579-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_114supercontigscaffold_114:4217..13313 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
151.73 158.38 134.2 124.06 67.26 53.32 69.62 72.94 192.24 159 178.08 194.95 205.6 229.48 348.77 441.49 224.21 201.21 297.2 327.58 165.45 165.98 248.76 287.01 185.14 166.96 210.35 330.2 715.15 575.7