XLOC_029775 (gene) - C. hemisphaerica

Overview
NameXLOC_029775
Unique NameXLOC_029775
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_116:413056..423115+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029775 ID=XLOC_029775|Name=XLOC_029775|organism=Clytia hemisphaerica|type=gene|length=10060bp|location=Sequence derived from alignment at scaffold_116:413056..423115+ (Clytia hemisphaerica)
GTTGAACCCGACTAGAATGCTACCTACCAGTCGGTCCCCTATGACTGAGA TGGCGATGGGGACGACTGACACTAGTAAATATCCATGATGGACAGTTTTA TAAGGGATGCAGCaggtatgatttttttaaacactaTTATTACTAATTTT ATTCGTTGCAACAGGGCTCTAGACCCTGGTAAAGATACCCCTAGGGTTGG GATATACTAGGCTAAGCCTGGTATGTCAATATACAGTTACAGTATAACTT TTATAGACCTAAAACtcggacaaaaatcagttttttgaaggaCAGTAgga cagtcaggcacatcctggcaaatgaacagggtatttttcacttgcaatgg gtggcaaatgcaaggggttgaaaacaaaagtgatgtaataacactgaata ccccacgcaattgaaccgggttggaaatattttgcttcatttcaaagaac tgcatagatgaaattttttttccatgggtcaattttgtcttcgaAGATTG AGGAAACTTTTAACGAAAAAATAAAGTTCCCAGTTTTCTTCCTTTTTTCC CATTTTCAGTTTGAAGTTCATTTatattcattttcacgcttttagcctga gacgtcctatctcatttacactgggggacgaataccccatgcaaatgctc accccgttcatttgccaggatgtgcctgactgaaggagcaagacgtaatt aatcgaacgacaaaagttcgattaagttctttaatcgaacttttcaaaag tcgctaaaattttgagaattcgattaagttcgacaaaacatattttaagt tcgacaaagttcgacaacgagaaatgtttgacaaattcgacaaaaagcTC AGTTCAGTTCgataaagttcgacaacaagaaAGGTTCGATAAATTCTATG ACATAAAATGTTTGACAATGTTCGACAGTACAACAAATTGAGGAAAGTTT TGTTCGACAACAGACAGCTTTGACGGAAATTCCcgctatttttccttttt ttgcaaaagttgctgtaggaatgaaaataaagggataatgataattgatt ATCCACTGACCGATGATCTGATAAAAAAGCAACTTATAAGATCTTTTTCT GTTGAAGTAATTactgtacacatttttttttataagcaagtgtctgcccc ctATGGCGCTATGTCAGGCTCGCATTACGCTTAGCATTAGCAGTCTGCAC ATGCTAATAAATgatatgcttatagaaaaaacatgtagttatTCAAAGGA CCGTCATGTTCTCCCAAATGACTATGCCAAGGAGGTGAATGTTCGAAAAA TTCGAAACGTATGAAGATAGGGGTGTTCCAAAGAGGCCCCCCCCAGcagt ttgcgtgatggcgtgattgggacttttttcttgcgtgatggcgtgattag agattttttttgtgagGTTACTCAAATAGTTGAACAGTCAGTGTAATGGC TGACAGCGTTTAtctttatgttttctttataTCTATTGTTTTTCTTCGAC TTCTGTTTTCCCCTTGGTCATAAACAAGATGCAGAAGGCTTCAACCCCAC AAAAGTTTCAACATCTTTCCAAGAGTTTCCGAAAGATTTTCTGTACACGT GCATTATCGTTATGAAAGGTGGAGAAggtgaaagttttgagaaaaatgcc tTGTTTGAACTGTTgccagttacatcaaaatgcctcgaaaatgtcaatat gaaaattgcataatcagagaacgtatgtctcgctcattataaaaaggctg agACAAACTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtggattgt aacatcgagttaagtctcttttgttaagtcaccagggggtaaataaaaca gaccttgatacatttatcgttcgtttcaacttgacgattcatttaaaact tagcctcctaaatatttggggtaggtaaagtatgtacaaagaaattcata cttttccaacccggcaaatcttaaaaaaaaagcgaacaataaaatataat taccctttccaaataaacctcttcggtggcgagcgtagtctactctgacg taattgtaaaatttatgtgatNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCT CTGGAATtttgattgcatttattcaggttgattttttatgacttctaatg gtactttttctaacgagtttgattactctgttctcacacttatgtctttg tttttcgcgtccttttccgtgattacttttatttatatttttaaagacag gtaagaaggcatattgatgtaactggtTGCAGCTCATTTTGATTCACCCT GTATTTACAGGGATGCTTAACCTTGTAAATAAGTGCTTTTTACATAATGG AAATACATTTCCTGATGCATAAGATTGTTTTGTGTCTCTATTCATTACAA TCAATTTAATACTCTCGTTTTTCGCCTTTTtcaggggggggcacgcagtt actacaagacagtatgacacttactaccgtggtggtactgtattcagaag ttatgaaaacagttactacacagtgtagtaactgctgtttgggggtggtg ccaaacactaaaactagcacttttggtgtagtaagtgcttatattttaat tctttttaaggaactttcaaaatttttcacaaaaaatgaatttttttgtg aaaaaattctttgttaaaaaaatatttttgttataaatggacgaaaagaa atttgaaatttttctcagacccaactttgaaattatgctttccctaatta tcattaaaatgttctcaacagctgttaaccaagtaaattaaaagaaaaNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNactaccaaggtgtagtaactgcaaagggtggtggtcctgaaaaaa agtgttgaaaaagcacttactacacatcatgtcttgtagtaactgcgtgc ccccccctgcctttttcaacatttttttaaaattgttattttaggttttt gaacataacttttgaaccaatcgagtaaaaaaagtaatacaccaaatttt aagttaggctttcctctgaatgattccaaaacaatctttgaaaaatctat tTTCTACTGCCTgcaacatcaaatcaaagagggtaacttatttgtggcac atCCGGTAGATCAAAAATACCTTGGCCCCACGAAAATAAGTTCTgcaaca tttctttgtttagGAGCCATTGTTGTACTTGGAAGTGATATCCCTCAGAT TTTGCTCAAATTAAAATCAGTGTTAGATATTATTGAGAAATTTATTGCTT GGCCAAAGTTCTGGATTTTATGCCGCTTTGAAgatttgcttatttttatt ggTTTATCAAGACTAAAACTCCAATCTTTAGGCctgatttaaaggttttg tttttaaataagagtgatattgtttgtTTACTCGTCAATATTaagttaca agctttttcacattgaattgacacatgTGGAAAAAGATTGGTCAGAAGTA GGGAAAGAAAACAAtttggtacctgattttagcctgtggctaggggggac taaccatgttaggggtcacctaaattttttcagatggacctgggggctag attctatgtttggtgattgaattataagcagcctaccagaccataggttg gcactttctcatcttatattttaatctaagcaatgttcaaaaactgacaa tttggtatctgctatattatctgcagtgccgtagcaactgggccCCCCAa gggggctatgcccccaataattttttcaaaaatggttattttgcaaaatg caaagtttttcttttttaatttgtcataattgtcttataagtgcatgtgt tgagtgcattttcaagcaatctagagctcaaattttcaaaattccccccc ctcgggccaaaccatggttggccctcgctgtgtcactaaacttcagcacc cctaatatgaaaatgcttcctacggcactgatctgtaaaaattctttaat cctgttgcatttacttagataaaaaatctgtctggcaagggatctgcacc ctgacttacaaaaccttgataatctgTCATGAACCTTCAGTACTTACTGT agtttatttcttattttttagggcatttattctatttagcaataagctaa actaactgttgtatttgtttgattgtttgaaaaaggattttcgaaaaaat ttgacgtgtgtcattggcttaggggtcacctaagatatttggcaaccagg ggttacctaaatcttaggggtcacctgaattcttagggggcacctaaaac ctgctgccaagccatgtaTTAATAACAATAGGAGACCAGTTCCTGATATG AGACATCTGTCTGATATGAGACAGGAGCACTTTTGTAAAAACAACTGAGG CTAACTTCTTGAAACTCATCTTTTTTGAAGTGATTGGGAAAATTGCATGG AAAATCCCTTGTTTTGTTTCAGTAGCATCCTCTTCTATGacaccgggtgc gccacaaaaaagtttctctctttaaaactgattttctcgaaatctaaaaa agaaccatttcttttccattggaaagaagaaaaacaaacttaaattttga tgggtcatttattaaattcagTTCATTAGAttgaaagttatgctcaattg aattaaaaagttactttcagaaagagcccgaaaatgttaaaaatcgatct atcaaatttcattttaaaattggcaatcgcaataggctttacatgattaa gagtatttttcagtaattaaacacataaattttgaaattgatgGGTTCGA AAgtgtttaaaatcttcatcaaaatcattttaatttactttcactgaaat tttcatcagatttttggttctagactagataaagtctatgtaaggctgga tgtacctcaaaacccatatttgatgtatttttatgaattttaccagattt tttggcttttttcaacaatttttttggacctaccctggtggggtagaggt cctataaattaaccgatgtccgtccgttcgtctgttcgttcgtctgttcg tccgtctgttaccagcttttctcaggattggctcattagttttttttgat ttttggcacaatgatgcaaaatggtaatgcccaaaaNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNaaaaaaaaattatttccggccgaaaat gccggaaatatgccggaaaaaccggtttttttggcattttctcaagattt catcattagttttttctgattttNatttttttttggcattttctcaagat ttcatcattagttttttctgattttttgcacaaagatgcgtattagcaat gcccaaaacttggccgagtccgattNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNtctaagtttcatcatcaggtaggtctattcagcatgttgctt gtttgaatttcaatggctgtgtgtttgaaagtctCATTGTCTGTTGTCTC ATTgtcttgttttctttttattgaaattcaagcttcctttatataacaaa aggtcatttagacagctagttatcatttttaatgactgaaacgaaagtac tgatgtatcatgtaattatgcttctgtttgatttgatagatcgattttta acgtgtttgagcactttctgaaagtaacttttttattcaattgagcataa ctttcgatctaacgaaccgaatttaataaatgacccatcaaaatttaagt tgctttcttctttccaatggaaaagaaatggttcttttaaacaTTTGTTG CTCTCAACATTTTGAGTCTTGTGTTATcatatgttttatttttattaaag tcgtgtcctaaaaataaaaaaaaggaatACACAAATCTGAATAGGAATGG AGAAGCCATTGATTGAGTGTTTTTACACCTGataaaaattaatgatttga ttgaaaatattttgataaataatgaaaaatatcaaatagaaATTTTCTAT CAAGGAAAATTCTGTTGTCTGAAATCAATGTTATTGAATATTTGGTGTAT TGTTTTTCCAACTcaaattttaatgaattttataTTAATTTTAGATATCA AAGATAAGACAATGagttttgaaactttaaaatgGTATGTGGTGTCCATT TTTGATCTATTATGGACATTGATACAAGTTATTGGTGCCATTTTAATTGC AtgtgttgaatttttttacgTCCCGCCAAAAGATCTTACTGGTGAGATTG TAGTTTTGACTGGTGCTGCTGGTGATATTGGTTCAAATCTGGCAAAATTG CTGGCAAATGATGGTAAAACTTAAAACCTGATTATTTTAACCTAGTAATA TTTTAACCCTTTGCAACTTCTGTGTATTTTTGCTTTCGTTCAAGTCTTCC ATagtgcaaaacaaaaaaacaaatggATTGGATGCTATGGATTGCTAGCC ATATTTATATTCCTTCCTCCGCTAGGAATATCTTCTTGTGTTAGTTGTTA AAGACTTTGTTTAAAACTTTTCTGcatgattttatttaacattttgatct cttattttttccaaataaaatctaatatGTGTTTTTCTATTCAGGATGTA AGATGGTTTTATTGGACATCAATAAGTCAAATTTACTGAAGTTATGTCAT GAGATCAATAAAACCTCTGGCAACAAACACGATGCTATCTCCTTTGCATG TGATATCACTAACATTGACCAAATGAAAGATGTCTGTggagaaatcaaac aaaaagttGGAGACCCTACAATGCTGGTCAATAATGCTGGAATAGTTgct ggaaaatattttcatgatttaGAATACAAAGATTTTGTGCGTACTTTTGA AGTCAACATgctgtcaaatttttttcttgtcaaACAGTTTTTACCGGCAA TGATAGAGAAAGAACATGGTCACGTGGTGTCTGTGTCATCTATATTGGCG CGTAAAGGGTTGGCAGGTGTTGCTGAATATGCTGCTTCAAAGTCTGCAGT TGCAACATTTATGGAATCGTTGAGATATGAAATACAAGTGGCAGGTACTG TATAGTctattttttgcttgattgggggctgtatttttcaaaaaatactg ggggctagcttgctagggaggggctgagtgttgtgtaatagaactggggg cagagctgataggttgaagatattttaaattatgttaaaaatctatgctg tggggaaggttttatCCCTCTTGAAAATCTTTGTGAAGGTGGGGACTATG TTTCTAGAATTAAGCCggggctattttccttagccccccccctccctgaa aaatgctgggggctggacccctctgcacactatgtcaAATATAATCTTTG GTTACAGAGTTTATAGCTTTTTGATGAGGAATTCACAATCCGAGCTGAAG CTATGAGGATTACAAGCCACCTTTTTCCCTAAAGAACGTGTGGTTGCATC CTGTAGTCCTGCGAGATTAGTAGCCCTCTCCCAGGGCTGTATCTtgattt gaaaagtttgattttgaatttatgAAAATCCTCACCCAGTAAATATTAAA ATGAAAGTATTTTAAttaacaaaattttgatttcagcaaaaaaaaaattt ctttttaaaacatcaTCAGGCCTATGATACAAGTAAGAAGTCACATAGTT CGatcccccctttcttaagggggggggggggggggtgacacCTTCCGAAA AAATGAGAAGGAGGATAAAGGGAGATAAGGGATAACAAGTTAGGGGGATC GTTTAAGGTTGATTCTTGGAAAGGGGTAGCAGCGAGAAGGGAATTATTAT TATCGGATCCCACTATACActatatattttcgaaaatctagcccaaaacc cttgggCGATACAGTAGACATTTTTTAAGGTTGGGGGATTATTTTAGAAA TGGgggggggtcagacccctttccgcgcTATGAgtcaaaacaagtaaaca ataaATCTATGCcgtttatatttttcattttgtaggAAAGAAAGGCATCA ATTGCACCACTGTTTATCCATACCAACTTGATTCCAATTTATTCAAAGGG ACTGCAATGCGTTTCAAATGGGTTCCCTTTCTTCATTTATTAAAACCAGA GTATGTTGCTGAAAAGATTTACACAGCTATCAAGAAAAACCAAGTGACAT TATATATTCCGAGAATTCTTTATTTCTTGGTTGCCTTACAGAATTTGTTA CCCGAAAGAGCAAATGATATCTTGTATAACTTCTTACAAGCTAATGAAGC AATGAAAACATTTTGTGGTACTCGAAATGTGAAGAAATCAGATTagaaaa cattgatttttttatttttaaactaattttttctttaataacGCTTGATT TTGATGGATCAACAAATTTACCcctgtacacttttttttcttaCTTCGTa gcttttgtaaattttttctaccgggtgcgccacaaaaaagtttctctctt tgagactaattttctcgaaatctaaaaattttaaaagaaccactcCTATA TCATCGGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046645TCONS_00046645Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046645-proteinTCONS_00046645-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:413056..423115 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DHRS3short-chain dehydrogenase/reductase 3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
53.96 52.87 24.26 22.68 13.25 10.48 8.77 8.72 11.49 10.05 9.29 8.02 6.17 5.49 8.71 7.01 8.27 7.22 6.75 7.61 11.79 10.43 34.65 32.06 4.29 6.78 6.99 6.22 20.7 21.74