XLOC_029848 (gene) - C. hemisphaerica

Overview
NameXLOC_029848
Unique NameXLOC_029848
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_117:193610..196597+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029848 ID=XLOC_029848|Name=XLOC_029848|organism=Clytia hemisphaerica|type=gene|length=2988bp|location=Sequence derived from alignment at scaffold_117:193610..196597+ (Clytia hemisphaerica)
atgtttttcattttcaattatttttcttttattcttaaATGATAAATCAT
TTTTCGTTATTTCATATATGCATTTTTGTTCTCTTAAAACTAACAATAAA
CAGCGTatgtataagaaaaaataaacaagaaatgttaagaataaaattct
tgtaatttttataatcataaaaatccttcaaaaataaatctttgttaaaa
aataataacaataaaaaacttaaaatccattatttttttggacaaaaatg
tacATAAGGTGTGttgaactttttataaaaattcaacTAAATTCATAAAG
TAAATGGTCTTCTGTAAAATCTTTGATAACCTATATACAATTTCTTTTAA
TATATCAACATCATTGTATTTACAAACAAGTCAAAATTGCTTGcatttct
aaagaaaaatatcttcaacataaataaaaaattgttttatattGTAATGA
AAATGGACATGGGCATTAAAAGACTTTTCCTTAAAACATCTAACACATCC
TAATTAGTTAAACTCCAAATAGAAACCAGTCTGATGACTTAGCCGTTATA
CCTGGTTTCCGTTTACTAACTGTTCCAAAAAAGGTTTATGAATGCATGGA
GGTATGACGCACGCAACTAAAtctaattacttttttattaaaCTAAAAGG
AAAAGCATCGTTAATGTTATTGCATAATTAGCGCGTTGAGGTTTTTGTTG
TTCTATAGAGATGTCCGCTCTCTATATTTTTAAtcacaatgaaaaaataa
aattcaaatcttaaaaaataacCGTCACATTTTTGGCccctttgtatttt
ttttataatacctttgataaccttgttaaatttcctcaaaatattGTTAC
TTTTTCACGAGATAAAATgttcaagtttttcttttctgtttgtAGAAAGT
CCTGGCGGATTTGTGTAAATCCTTACATATTCTTTGTTTACgtattttgt
ttacattttgaagttcattttgttgtttgttgcaTGTCCGTTGCTGCAGT
TACAAACTGTAAACATGAGTTACGATACCGAAAATAAGTTTGTTTATTTC
GAATACCCCCTCAATCAAGACGAAAACATAATATCGGATTATGAAACGAA
TCCGATCTGCTTTATGTACAATATCGTCGATTCGAGGTATTAATCACCGA
TTAAATCGGTACAATCGATGACAATTGATATTTGTCGAATATTTGCGAGT
TCTCCACTTTGCTTCCGAGACAGTTCGTACCAATTTATTTGACGTCGCGA
GTTAAACCTTTCAAGAGATTCAAACACGAAGAAACACGGCAACTTGTCTT
GCGTTTCTTGCCAGCTGACGTTGTCGAAGATGGTTGTTGAGACATGGAGA
TGGTATGAATCCTCTTGATGATATCATCAAAACAATATTCGAAAGCATCT
TTAACATGAATANaaaataaaattcaaatcttaaaaaataacCGTCACAT
TTTTGGCccctttgtattttttttataatacctttgataaccttgttaaa
tttcctcaaaatattGTTACTTTTTCTCGAGATAAAATgttcaagttttt
cttttctgtttgtAGAAAGTCCTGGCGGATTTGTGTAAATCCTTACATAT
TCTTTGTTTACGTATTTTGTTTAcgttttgaagttcattttgttgtttgt
tgcaTGTCCGTTGCTGCAGTTACAAACTGTAAACATGAGTTACGATACCG
AAAATAGGTTTGTTTATTTCGAATACCCCCTCAATCAAGACGAAAACATA
ATATCGGATTATGAAACGAATCCGATCTGCTTTATGTACAATATCGTCGA
TTCGAGGTATTAATCACCGATTAAATCGGTACAATCGATGACAATTGATA
TTTGTCGAATATTTGCGAGTTCTCCACTTTGCTTCCGAGACAGTTCGTAC
CAATTTATTTGACGTCGCGAGTTAAACCTTTCAAGAGATTCAAACACGAA
GAAACACGGCAACTTGTCTTGCGTTTCTTGCCAGCTGACGTTGTCGAAGA
TGGTTGTTGAGACATGGAGATGGTATGAATCCTCTTGATGATATCATCAA
AACAATATTCGAAAGCATCTTTAACATGAATATTGTATTTGGACGATGTC
AAGATGTGTTTAACGCCGTGAATCTCATTCAGAATGTCAATAACCTCTTC
CGATTGCTCCCAGAACTCTGGTGGAGTTGAGCCACGTTTCAAATCCGATT
TAGTACCGACGAGTACGATCGGAACACGGTCTTGTCGTGTCGACTTGATC
ACGTTAAACGTGCGTCGAACTTCGTTGACGGATTTTAAATTGTCAATTTC
ATATACCATCATGATGACATCAGCAGTTTGGACATGAAGATCTCGAATCA
TGTTTGATTTAACTGATCCTGGTAAATCGACGATATCAACGTTGAAATTA
TATCCTCGGTAAGAATAATCTTCATTGAAAAGTCCGTCAACTGATGGAAG
GTATTGCATTGTGAACGCATTATTGATGAAGCGGCGAATCAAAGCTGATT
TTCCGGAGCATGTGGAGCCGACCACTAAGATTTTTCTGGTGCGTCGCTTT
TCAGCGGATTCTTGGCGGATAagtttttgtacttttttggtGTTCATTCT
TCGTTTGTTGGTTGTTTGTTTCGTCATTTGATGTTGTTGTTATCGGCTTT
GTTTCTTCGTTGAATTtcgttttaaatttcttatttattACTCTAAGAAG
AtaatgaaaaaagataaattatATTAACATGTCGTAACACAAAAAGCAGT
CAGCACAACAAGATATATGTGTGAATCAGAATAAAGTCGGGTCACAAATG
AAATCTATCAAATCAAATTATATCCTTCTATATCccaaaacaacaagaaa
ataaaaacaatgtttatgaacgaaaataaaaaatccccCATGAGACGGTT
CAAAAAGATAAACAGAAAAACTGAGGACTGAGAGGAGGATAAAACTGTTC
CTATTCCTCAACCAAGTCTGTTCTCTTCAAACCCTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046771TCONS_00046771Clytia hemisphaericatranscript
TCONS_00046772TCONS_00046772Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:193610..196597 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0.07	0.05	0.06	0.5	0.39	6.96	7.9	14.93	72.55	13.38	16.47	135.14	114.31	155.94	111.95	98.1	128.33	81.03	63.6	10.09	10.87	10.52	5.43	24.91	11.64	110.04	74.01	172.89	153