XLOC_030152 (gene) - C. hemisphaerica

Overview
NameXLOC_030152
Unique NameXLOC_030152
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_126:136951..143373+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030152 ID=XLOC_030152|Name=XLOC_030152|organism=Clytia hemisphaerica|type=gene|length=6423bp|location=Sequence derived from alignment at scaffold_126:136951..143373+ (Clytia hemisphaerica)
AAAAATCCCAAAAGGGTAGAAACAAATTTTATTACTGATTACCCTCTTGG TGTTCCAGCACTCGACTATATTTACACTTCcctactttttcaaactttaa tcatcaggtaggtccaatcagcATTCCTTTATAAGAgacagtaaattttt ttatgagactcagcttttctttatttttctttttcttttttgccactttg agcctcaaactGTTCtgatcctgttcttatttatagggttttactatttt tacccctaaatcacttgaaattgagtaatctCAGGCGCAACGgtattctt aaattgttcttattttttgtcgatttttgaCCCAATGGGGTTAcaaggga aatttgaatttgtgatttctttttgggTCCACTCACACCATCGCGCCGAA AATATCCTTTCAGCACGCTTTTAGAAATCATCGATCACGTCATCACCCCG TCATCACGTCAAAAAATAGGCCCAATCACGTTATCAAACAAACTGCTAGG GCTTTCTTATTAGATTGTGCTACAAATATATATCTTCCTATTTTCAGAAA CAGTCATTTGCAAAGAAATTAAACCAATGGAAATCAATCTTTCGTGATAT TATTATTGGCATTTGTTGATGTTTTTTGTTATCTAGCCCCCCAATATCTG GACATGAAAGTTTGAGATGTTTGTAAAACAATTATGGCCGAGGATGTATT GTAAGTACCATTTCATTATGTTTTAATGGCTCATTAAATGGCCCTTTTCG GCGATGGCGATTTCACCTTTTTTTGAGATGAAGAAACCATTGAGTAGAAT CACTAACCTTCCCAGGCAAGAAAGAGTGAAGCCACTCTTTCCCATCCAGG ACGCGCTTAAAACGCGctgcaatcatgacgacggattttttttgaggact gcattttttttaaatctagcgatagattttactttcaatccggcgtttgt gtaaaaaccatgcGCGGGTGTTCTGTatatccaggagtctcgagtctagc ccttcttggcttggaagtcaatggaaGAAACTCATTCATTGATTTACACT TATgtatagatatatagatagaGTCAAAATCTAGAACTCTTAAGGGCttt gaccatagtgaatttttaaatatttgccacttacaaaatataatttttta cttgatgtagcccacaaaactgtgtCATGTTATACAATTAtccgtgagtc tgaaaatttaagaatcacaatgagaaaatttgatgaagaagaaaaagaag acttttgcgaagaagagtatttcaactttgaagagcttagtttcggcgaa gaaaaaacatttttaaaaactttctgcggtaaatggtgtatcttttatcg aactaaaattattttttcggagaatttttctaaaagcttatttgcttcaa aatcttgaaaatagtgctttttgaccaatttttcatcccaatttttcata gaagaaaagccataacttttgatgcattaatttagaaaagttttccgaaa aatctaaaacagttcaattctttgtggacagtttgaaaaaacttcgaaac aaaaaggttaattacccattaaaacttagcactttttataaatgAAGGTG ATGccacatattattaacgtctttttaaagttcataacgtcgtGAACTTA ACGgaacctggaggtcctataaatcaaccgttgtccgttcgttcgttcgt tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc gttcgttcgttcgttcgttcgttcgtccgttcaaaatggcaatgcccaaa atgtcaaggagcctgattttcgaaaaaaattctttttcggtcgaaaatgc cggaaatatgccggaaaaactgttttttttggcattttctcgagatttta tcataagtcttttctgattttttgcagattttcattggattttttcctta gaatatttctttgttttttcacacaaaaatattattgataacaatgccca ccatcaagcatgattcaattgagATTTCTGTTTCCTAAAagttttgaatc ttttttttttcaatgaccATGGTCATACTGTATCTCAAAGCGTTTTCTAG GAATCTTATGAACCTTCAACTCTTATCGATTAAATTTTAATTCTCCCCTT ATAAGTAGTTAGTACCCTGTCACTTTTATGGTATTTTATAGGGTGTCAAC TCCTAAAATTACATGGTTGGGACAGGCTGGTGTTGGAATAAGAAGAGATT TTAGCGTAgatttaaaatgtgtttttctaACACAACCCCTGGCGCCACAG TGGAGTATTCTTTCATGAATGGCCCATTTCTCTAatgcacaatttttttt aactatgggaaaatggccgaaaaatgCGTTGTTCGTTTTCTCAGCAATTT TGCACTGCACTGTAACCCctatttgaattttaaagataGATGTATATGAT CTCCCTTcaacttaaatatttttttactgtGAAAACTGAAATTATTTATT ACCATCATAGTACCTTAAAGCAAAaggtatttaatttcgcgaattttaca CTCCCTTCGGGAAATTTTTACTCCCCTGATAGTATACCAAAAAACTGGCA TAGATCACGATATCAACGTTCGgtttcctaatcttttttttttcatgttt atcatgaataaataacaaaaacaatatgGAAACTCTTACTgttattttga catttaaattgaatttaaacttttttcttgagtgCGATTTGCTTGGGTTA GAAAATTGAgagatattttaaaaacctggcTACANTCTTGAGTGCGATTT GCTTGGGTTAGAAAATTGAGAGATATTTTAATGGCCCAATAAAAGTTCTA GTAAAAAGGCATCTTTCTTGACTATACTgatttcgaaccccccccccctt ttatatTTGGACCCCTCTATTATTCGGGTCCTTAGAGTAGAATATTTCAA CaggaaaatgaagataaaaaatcgcTACAGTGGAGATAGCATTCTTTGAT TTTTCCCCGAACGGATGAAAATGTTCTTGGCGTCACCAGCGCAGGGGTAC CAGTTcattaaatgtataatttcatagcaatgaaatctgtttgaaaacga ggacaacaataaatttatgcatctcgagaagagtgtatttctGAAAAGTC TTCTCTCAAACAAAACATCTTCGGAGACCTGGAAGGTGATGAATAAAATA ATTCATCCTCGTTTGAAACGAATGAATATTGATCCTGATGAAATCAACGC CTTTTTCAATTCGACAGCTGTACGCACAACAGCAAAGAACCCAGAAAAAC TATCAAATTTCTTTATTCGCAACTTACCTGATCACCAAGACAATTTCCAT CTCCGTCCTGCAACATGTGATGAGGTATCTAAAGCAATGTTGAAATTAAG ATCAGACTGTTCGACCGGTCACGACAATATACTGTCATTTATCAAACCAG TTTCAGAATATCTCGTGTGACCCCTAATCCACATTATTAACAGCTGTATC GAATCATCAATCTTCCCAGATGACTGGAAGATAAGCCGCATATGTCCTGT CCCGAAATAAAAGTCAATGATCCGCAATCACTTATTGATCACAGACCCAT CAGTATTTTGCCAATATTGTCCAAAGTCTTCGAGAGAGtgatactcttgt ctcccgaatagacgccccccgctaattgttaaatgaaaaaaaatccatcc cccgctcttattaagacccccccccccgctaattaaattcgaataattta aaattttattacagtgtagatagaccttaaacttgttaaaaattttcttt ttgttagtattggttcttattttacgtgtttatttgttaaagtttctttN NNNNNNNNNNNNNttaaattcgaataatttaaaattttattacagtgtag atagaccttaaccttgttaaaattttcctgtttgttagtattggttctta ttttacgtgttcatttgttaaagtttctttttttgttgttgacattgata tcagttaaaaaaaactcTGTCTTCGAATTACCCCCCCCTCTTATTTCACC CCCCTCCCCCGCTCATTGACCATTATATTTCAGCAAATGATCAAgctatt tcttataaaaaaacacgcgTATCTGGGACTTTTGGCAATGGTAATTCATA CAATAACAAAACAGTCTTCGCACGCCAGCTTGTAGTGCTGATTCATGCGC ATGCGCACTACTGTGAATATTGCTGATTTAGCAATCCCTGATTTGGCCGA CAAGAACCTTgaataatgttttcaaatttgatttttactcGTTGCTATGg tcataaagaaaaataaataaatttgttgttcttataaagtgaCGATGAGA TGTACTCTCTGCCGATTTCACTATGCGAACTATAATGCGAAACCCCAAAA CGAAGAAATAAAGAGAAAGCtccgattttagaaaaaaagccaTTTTGTCG TAAAGCAGAACAAACATCTTGCCGGTTAGCCTATTAGCGAGGTAACGCAA GAGGATACGTGGGACCTTAGACGCGTATAGGTCGGCCTGTACATAATTCG TATAAACAAAACTTGTAAATGAAAATTTATGTACAGGACCACATTATACC GTTTAAGGGCCTAAATATCATTTTGCGTAACCTCGAAATTATCGAACGCG CGTCTTTTTCATGCTATCTCGAGACCTCCttctttgaagaaaacttcTCG CATGATTTCACGAAATACCAAATCTTCTTATATAAAATTTTGAGGTGCCT TTTATTTCCCTTTTTATTTATAGCAAGCAACAATTTCCAGGTACCGATCG CAGATTTCAGTGTGGAGGAAGACTTATTTAGATCAGTGAAAACTTTGCCA TCAggagaaaacaagaaaaaaacaagGTTAGTTCATAAGAAGTCAATACG ACTAAAattgtaagaaaatatattaaAGTAAGGAAGACTACAAGAATATA GCGTACAAAATAACCCCCgtcatagtgtgcaccccctaGGATTTAGGGAA GgagtttattttgttttctgaCTTGGAGTTGGAAGTTCTTTACAAAGGAA TGTTGTtatgttgttctttttttaagGGAGGGGCTTCCAAGCTAACTGCC CAGTAATTCCTCTGTTATCGAACACAATTACAACCACTGAAACCCATTGT TTTTAGCTGAATTTTCCATGGAGTGAAAATTTTGTTTGGAATTCTTTTTT GGAGTATCAAATATTTTCCAGTGTTGCATGTGGTTTTTACAATTGGACAA ACTGATTATAATAGTACCATAGTTCTGAAAGATCTTATGCCCACGAAATA TTTCTTCCCCATGGAAAGTCATGGTTCACGGTGATGTACTTTCCAACCAA TAAAATTAAATCACTTctaactcactaaaagattttgtttactgAAAATT cataattaatctttagtaagtgttctgcccccccccccccccccNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNCCCCCCCCCCCCAGCTCTGACGTCATGCCGTAGCGAAGAATTT GCGAATAGTCCTGCGAAAaagaatacactttttttttataacaacaaagt atataagaacacaaggcttcgaggtcaaaaaattaagaacaggaTTACGA ACATTTGGAAGCTTTGGAGAATCAAAATCATTGAGGTTCTAACTCTTTGC AATCTTGAGAAACCAAAGCATATTTATTGCCAATTTACAACATACATTTA TTTCTACAGCAAATAACATTAGCTCGTGTGTGTTCAGGAATGACACAAGC GTGACGTTCGTTACCGGCTGCTTTGCATGTCAATGTCTCGAAATGAACAT TGTTGCCACAGATCTTCCAGTATTTGATGTCACATCGAGTTTTGATCATG TCAACTCTTTTTGCGTTCCAACATCTGACCAGATCATTCAATTGCTCTGT CATTGTTGATCCGTCTTGGCAAGCCATGAAAGAACCGACGTGTACATCTC TTCGTTTTGAACGTGTGGAGAAATGTTCTGAAGATAGAGATAGATACACG CGTTTTTATGAGAATTAAGAACAGTTTTAAAGGACAATAATGGACTTTAT ATAAGAAGAAAATactatttaaaagaaaaaacttgCATAAAACAGCTATA AATGACCATTTTCGATGagaattttaagaacaattcaTAGAAAGCttgga tgaaaaaaatccaTTATAGTGTGATCTAAGCTTGTCCTGTACAGATTTTA AGTAAATAAACTTTATCTCTACAAATACAATATTCCTTACTGTAAATAAG TAAGGGTTTTACTGGGAAATGTCACCCCAAGTCAAAGTGGTCAAAGTAAC AATCGAGCTAGTGAGGTCTTCTGCTCATCTTGCCCGAAATTCACTTacac ttttataaaaaaaagagatttaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047329TCONS_00047329Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:136951..143373 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.53 0.59 0.56 0.7 0.11 0.09 0.32 0.1 0.21 0.24 0.13 0.05 0.27 0.19 1.53 1.78 0.76 0.64 0.61 1.65 0.39 0.34 2.49 2.64 2.38 3.85 0.33 0.39 9.74 13.31