XLOC_030184 (gene) - C. hemisphaerica

Overview
NameXLOC_030184
Unique NameXLOC_030184
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_127:66519..75514+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030184 ID=XLOC_030184|Name=XLOC_030184|organism=Clytia hemisphaerica|type=gene|length=8996bp|location=Sequence derived from alignment at scaffold_127:66519..75514+ (Clytia hemisphaerica)
GAAATAATTTGATtcattaaaagataaaaataacaaaaatgggTGATAAC AACCAGAGGTCACCAGAAGACTTGGGAGAAATCATTTCTTTCCTCCTTGT CAGGTAATAAATAATCATTAAAACAATAGTAGAAATACTCTTaggatctt tgttttggtatgtaattttaaaatttttgttatttttggaaATTAGGATT TATATTAAcctttacttttcttatatCCTTGgaatgagaaattttttcaa tatttcatcagaaaaatattaaattcaAACTGAAGTCTCTTTTCATTTat aaaagttacaaaaatagcagatttctttctttctttatagTGGTCAAGTT CGTTTGGTTCGATCAAGTGGTATCGGAGCTTTTGAAGTTGATATGCCAGC ATTTGGTTTTGGAGGAGATTCAAGTGATGATGAAACTGGCCATTTAAACA CAGCTCCTTTGTCGCCAAGAGGTTTGCATTTCCTAAAATCCAACAACAAT TAATCTTGTTTTCCTTTAAAGACCCTACGTTAATAAAAATTTGTAGCAGT CGTAGTGATTGTCAATGATATGAACGAAATTTGGCTGATGGGGTACTGAA GGAGTTAAAGAGAGTCAGGCTAGATATTTGGCTATTGCAGAAAGtgaatt atttcattttttccatttttcaggaGATACAGCTCCAGATACGAGTAATA TCGAGGTAAGTTATAATTTccagttttaatttttctacGTGTCCCCTATC CACAAAGAGTTCTCCCTTTCTcttttcattttgtattttcCCTAGAATCA GAAAAGCTGTAAAACATTAAAGactgttttaaaaatgaaaattttctttt tttttagaaatctcGATTGAAAAACATTCTTCTAAATGAAACTGGATATA ATTACCAATACCCTAAAAACATTACAAATAGAATTCTAAAGGTATCTAGT TTTGATCATCTGTTCACTTTTTATAATCTACATCTGAAGGTTCAAATTGA ACAAAATCAATTAGTTTTTATTGGTATTACCTTTGTTTTGATCACAACCA CCATTTTTAATTCCACCTTAGAGACAACATGGTGCATTATTGGGTCGTGA TTCTTTCAACAGTGCTGACCGTTTACAGATCTATTCAAAGTGAGCAATCA ATTGAGTTCTGACTGTGCCAAAATAAGAAGGATGATCCATCTAATAAACA TAGCAAAGTTGTCATTGAGGATAGTAGTCACTGTTTCAAGTACAAGTGCA AGTGTTAGACTCATAAAATATAACGTTGGATGGTGTATGGTAAAGGAGAC ATAGTGAAACGCCACATTCTTTGCGATGAGTTTATCTGAGTATCACCAAT GACTCCCAAAGCCTGACATAGCTTGACCTATATATATTACTCTACTGAGC AATATTCCCCAACTTCTTGACAGATGacatcaaaaatgtttttctctttt ctttgtACCTTTAGATTTCTACCAAACAAATGTGACATTGTTGAAAAGTT CCGTTCCAAAGTTTTCTGTGGAACTTATTCCAATGATGGATCAGTTTTCA TGTCTGCTTGTCAAggtttttaattgttttttttggagtatattttggtt tttggtgTTGAACGATAAATACTTAACGCAAATTCTTTTGCATCGACTTT GATTGGAATAAAGGGCTACATATATATTGataatatattgctgaatgccg gcaatatattaaaaaggtgtccgcaatatattgtcagctcgatttgcagt ATTCAATACAATACAATCCgaaaaccatattgtcgaatattgctcACCAA TATATTGTATAGTCTAAGTACCCCTTCACGGGCCTTTGGTATCACAAGTc agatataaaaaaaaagatacaaataTGCTCTGTTTTTAACTGCTTTTGAA TTATGCGACATTCTCATAAGATATTTATTTTCCAAAACACTATCAAGCTC ATGAAATCTTGCTTTTTAGATCAACATATTCGTCTGTACGACACAACTAA CGacaatttcaaactttttcgtGATATCAAAGCTAAAGATGTCGGTTGGA GTGTTGTGGATACCGCCTACAGTCCTGATCAAAACTACATCATCTATTCT AGTTGGTCAGAATTTAGTAAGGGATCTTCAATACTGTATGCTTTGGTTGg gtcaatttaaaaaatgatctAGCCCCACCCACCCCACCTATTaaactttt tgcatttttatctTACCAGTTTTAATTGTTtgtataatacaccttttcga ccgtagcggccaattaccgcgcgggcattttttaccaccctaaactcgat ccagtccttgtttttacacttttttctattgtcttcaggcgcaaaaaaaa gactgggacggttttagggtggtaaaaaatgcccGTGTGGCAAttagcgg ctacggtcgaaaaggtgtattgaaatgAGCGTTCTTTATTATGAACCTTC CATTTAATATCCCAATCCTGTATCATCATAAAGAcattatgtttttgatt tttcagttCACTTGTGCAATGTCTATGGCGATCATGAAACACATCTGGCC TTGGATTTACGGTAAAGAACTACCAAGTTGTGTTTTTGTTTGGGATAAAA ACCTGTGAACTTGTCATAAGTTAGTGAAATGCAGTATGATCGATCCCAAT AACCCCCTACATAATTTTGTTTCGTGTTGTCACATGGCTTATAAAAGTGA CTTTTCAAATTCTGTATCCTGAAGTGACCTCAAAACAATGAAAGAGTTTG AAATAAAgtgttatatttttccatttttccaggagtatttttttactgaa aataCTCATCCCTCTGTAAAGATAATCGAATTAAGACTTTGCTTGTTTCT GCCCGCAGGGTTTGATTCGAATTAGTTTTCTCCTTTGCTCTGGGCACTAA ATATCTTAGGTGTTTATTGTTGGGTTTTACTCTTACATTAGTAGTGGGAT GGAGCATTTGCCCATTTCTGATCAAGCGCCATTTTTTGCTTTGTATATAT CAGTATATACATCAGTATAACCCTTCAAATTATGCATTAGTCTATAAAAC TCCAATAGTTATAAGTTTCGTTTTCGTACAAAATGATCATTTGTATTGTA AAGATGTTTTCCATTTCCTTTTAGACCAGACACCACACAATTTTGTGCTT TTTCTGTATCATTCTCTCACGACAGCAAGGAAATCGTTGCAGGGTAGCTA TTTTCTCTCTGACTCTCTTTCTGAAAGTATGGAGGGGGTGTAGAGGGTgc ccgggggggcactgggtttgcggactgacggtatgtgcgggccaaaaatt ggcttttaaaattgcacccttacagcgCAGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccc ccccccccccgggagagGGTGGAGGTTCGATTCCTATCAAAattacaaat aaataaaaaatgtgtCTTACGTTTCAAAAGATTAAACCTTTCAATCGAAA GATATTCGGTTTTGCATCCTATTTGTGTTGCTATTACACGGAGAAAAATT GTTgtgtttttaagaaattttaataacacttttttttatttttttagggg AAGTGATTGTGGCCTATACATTTATGAGAGAGGATGTGATCAACGAATAC TAAAGGTAATGTATATATCAACCTTTTTTGATCGGTGATATTTATGGCAA CTGACTTTCTTTCAAGTTGCCAATAAACCGTTTCTTTTGGTCTGTTTTGG AAACAACCTCACTCGAAAGTTTTAGAACAAAACACTCACCAACCCTTTCG GCGGGGTCGGCTTTTGAGAGTACACTAATTAGGTACATTCTAACCAAAAC CCTCTTCTGTATAAGAGAGATTTCAGCAGAGTCTTCATATTAGCAGAGTC TCTGTGGTGGAGTACAAACTTATTTTAGCATTCGAATAGCTTAACTAAAT CAATGTACTTCACAAGGAGCACTTGTTTTTTTATACTCTCATCGAAAAAA ATTAGCCTTGTATTTTTGTTACCCAGTCTCTTTAGAAGCTGAATGCGCCG TTAAATATTAGTCGGTGTATTTTGTGAACGTGGGCTTACATAAGAATGTT TGACAAACTTTGTTCATANCTGTTAAATATTAGTTGCTGTATTTTGTGAA GTTTGTCAAACATTCTTATGTAAGCCAACTAATTTTGTTGACAATATTTA GATTACAGCTCACGAAGAAGACGTTAATTCAGTGGCCTTTGCAGATGACA GTTCAAATATCTTGATCTCTGGCAGCGATGATGGCCTTTGCAAAGTTTGt gtttttctctctctcttctAGCAATTATTTTAAGTGCAACGAtttcctcg ttttgaaaccatttccAAGGGGGGGTTATATCGTTCTTTAAGTTTTAAAT TGTTACTTTGAAAAAGGGAGTAAACTTTTTATGAACTTACATTACAATAA CAACATTTCTTATTCTTCAACCTGATTcttttttgaatcattttgaatta tttcttCCATTTGAAGGTATGGGATCGGCGGGCGCTGAACGAACAAACAC CTGAGCCTGTTGGTATCTTTGCTGGACATGTTAACGGTATCACTTATGTC AGTTCTAAGGTATGGTAACCTTTTCGATCCCAAAAACGTGTATTTACTTG TGCTTAACATAGTATGCAACTCCCTTTTTAATTGAGGGGATGCCAAAATT TTTGGGGCCTTTTTAGGGGGAACCAAAATTTGCCTCAGAAACTGGGGGGT GGAAATGTAGAGGGGTCAAATAAGAAAGGGGGTTCGGAAATTTTAGTTCA TTTAGTCATATACAAATGATCACAGtctattttaaagttttattatCTAC TATCAAGACACAAAAGTGTAATAAAAACACTTATCATGTATATATAATTA TTGTGAAACTGTTAGCTCTTGACTGTATACAATTTGTATTCTGTGATCAT TTTGGTGGTGCATAGACCGATtttccttcgaaacggattttctgtTAAAA AAGGGTTAAGATAAAATTTCATAGAGAAGGGGGATGAGTATATAGGGGGT GAAATTAGCATTGGGGGATccatacccctctgcaaactatggtTAACGAA ACGCTTTGCATacgtttaaatttcaaatggtACAATCGGCGGTTAGAATa caaaaaaagtacaaaaatttatatattgTCACGGGGACAAGGGAAACTGT CTCTCTGATAACAATAAATTTGTATTTGGGATCGAATCTGGAACCCAACG CTGGAAGAAGGGGAGAGCCTTTTGGGCATTGTAGAATTCAGGACACAAGC ATAAACTGACACTAGATGTAATTAACGACAAATCCGTGGTTGactttttc agtaattaaaacATAACAATTAGAGATTGAATACATTTTCAAATACAATG TTTTTGCCTTCGAGATCATTGAACGAACAATCGTCTTAGAATGTCGAAAG ATGCCTTTGGCTTCCTCATTCATAGCTCAATACAAAGACCATCTCTCAAA CGACTTAGGGGCAACGTTCCTCGTTCCCGTACAAAACCAATACGTCTACA TTCTTCCTCGATACGATCGTTAAGCTCCGCAAGCTTTTCACTCTGCCAGC CCAAACATAGAAATGTCTTAAATTCATTCACTAAGCATCATATGATTAAA TGCTGAATAAGATGGCTATAGAGTTGGTTACTATAGCAATATTTATACAA TATTTAAAATGGTCCAATCGGGATAAACTCCAACCGATTCATAATCTCCA ACCCTGGTTGACCCTTAATGTATTTCGTCCAAATGATTTAAAAGTTGACG TACGTTACTGTTTCATCCTTGTCAATAACACTGCAGTAGATCTAGAATTG TATGATGTGAAATAGGACAAACTCACTTTAGTTAATGGATTACTTTAATT TCAGAATGATGGTGTTCACTTCATATCGAATTCGAAAGATCAGAGCATCA AGTTATGGGACATTCGTcatttctcaagcgaagagacAGTCCGTGAAGCT CGTTCTATTGTCGCCAACCAATCATGGGATTACAGGTGGCCGGCTGCTCC AAGACGATGTAAGAATACCGACTCTACATTCTGAAGCTATGTACAACATT AACATTAGTTACAATTTATGTTTGACCATAAAGACAATAAACTGATAAAC GATTAATTGCGAGAGTAACTCAGATCTACCTTATACTTAGATGTTCCTAT AACATGTGGCAATGAATTCTCGAGTGTTTAtcgattgaataaaaatatgc aGTTTGTGAAGTGGCAGTCGTACGTCTGAAAGTCATCTTAGATCTAAATT GGCAGTAGACTTCTGTTTCTGGTTTAATGAATCCGTATTATAAATGCTCC TTATTACTTAAGATACCTTACCTGAAACGAATCTTTCCCTTTTCAGCACA ACGATTGAAGAAGAGTCCGGGAAAGGATGCGGTGATGACGTACCGTGGCC ACCGTGTCTTGCATACTTTGTTAAGAGCAAAGTTCTCTCCCGNACACAAA TCTTTCCCTTTCAGCGCAACGATTGAAGAAGAGTCCAGGAAAGGATGCGG TGATGACGTACCGTGGCCACCGTGTCTTGCATACTTTGTTGAGAGCAAAG TTCTCTCCCATCTTCACTACTGGACAGGTTGGTTGGTTGATGTTTTTCTC TCCCCTTTCCCCTTCCACTTTTAGGGCTCCCAGATGTTGACCATTCTAGG TATTGTCCTAATATTTTAGCAGTTAAAGCTTTGCAGAATCTTAAAAATCG AAAAGGTTTTCCGTTGGTTGAAGCTTTGCAGAATCCTTTCATCAAAAACT ATTTCTTGAGCTTTCGATGCGATATTTATATTAAGGActttgtttcaaaa aaattaaattcttaccattttttttttcttatccaAATTCTGTCCTAAAT CATCCTATATTGCCAGTATACCAAGTGCGCTGACGTTTTTTCGGCTAACA TCCTAGAAATGGACGACACCTGTTCAAAATAAGACAAAACACATAAGAAT TTCGATAAAATGAGCAAACCGAGGTATTGATATTTTATTTCCAGAAATAC ATTTATGCGGGTTGTGCTTCGGGAAACGTGGTCATTTATGATGTGTTGAC GGGAGAGATTGTGGAGAAATTGAAAGGTGTTCACAATCAATGTGTGCGGG ATGTTTCATGGCATCCTTATCAAAACACTATCATGTCTTCATCGGTGAGT TcactttcaaattcaaataaattAAGATAATTTTCCATCGACTCGAATTT CGTGACACATCGGGCCTAGCAATTGATCATTCTTCATTGCTGAATAAAAT CATGTAAATGTTTTTTGCTTGCACACAATATGAAGCTCTGATCTTTATCA TCGAGCGCTCTTTGGTGAAAACATCTATCACTTGATTGGTTGATCTTGAC CAATGCATCTTTTCGTCCGTAGCCGCCAATtcccgcgcgggcattttttt gtccttttttaccaccctaaaacagtcccagtctttttttttttgcgcct aaagacaatttaaaaaattttaaaaaaggatttgatcgagtttagggtgg tataTTAAATGATAAAGTGGTACGCGCCTGACtgtgcgactacggtcgaa aaagtgtattacGATTCGACCTTAGAAGTCAGAATCATTCATCACTGGTT TAGCGCAATACTATGAGTCTTAACTCCCACTTACAGTAACTTAGTGGAAT AACGTTGAAATTTGATATCTCATATTTCATAGTGGGATTTTTCGATCGGC CGATGGGATTTTCACCGAACGGACGTCCAGGAACAAAAAGATAACGATGA TGAAGAATCTACCACGTTACCAAAAAGCAAACGAAGACGACAATTCTCTG CCAGTGCCGTCTCTTAGGTAACACCATCATGACTTTGTAATGTACATTAG AGTATTGACGATGGGCGTGACAGTGGATGAACACTAGTGGTCATTATGAT GATTAGTATGGGCGTATCACAGGGGTGCGATTGTGTGGTTCCCAGctggc atacaacgttgtttcgacatttttctaacgttcacaacgttcgTATAAcc ttagatgaacgttgaaacaacgttgtgtgccagccggGTTGTTAACTCTA CATATCACAAGATGTCGAGGAGTTCCAGTGAGTTGGAAGGCGCAAACACC AATGATCAGTGCCTGTGTAATAACTGGTGGTCAAGCTTCATAAAGCATCA TAAACAGGTGTTGTTTATAGATATTGTTCGAAGTGTACAATGTGAGAAAT CAAGATAACTTTGTTTTATGGGTTATCAAATTTGAAGGATTTGATCCTGA ACCGTAAAGTAAAGTACTCTTAAAAGAACTGAGTTGGGTAGTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047376TCONS_00047376Clytia hemisphaericatranscript
TCONS_00047377TCONS_00047377Clytia hemisphaericatranscript
TCONS_00047378TCONS_00047378Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047376-proteinTCONS_00047376-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_127supercontigscaffold_127:66519..75514 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DCAF11DDB1- and CUL4-associated factor 11 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.25 5.7 1.53 1.26 19.65 14.88 18.8 19.63 18.4 15.93 18.17 16.32 13.89 15.56 12.31 15.04 16.99 18.85 13.19 13.26 20.94 21.4 16.81 17.59 18.08 19.8 6.5 5.62 12.62 11.82