XLOC_030189 (gene) - C. hemisphaerica

Overview
NameXLOC_030189
Unique NameXLOC_030189
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_127:226588..230969+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030189 ID=XLOC_030189|Name=XLOC_030189|organism=Clytia hemisphaerica|type=gene|length=4382bp|location=Sequence derived from alignment at scaffold_127:226588..230969+ (Clytia hemisphaerica)
cccacattgagtcccgtttgagttttttcatgtacccttattgaaatttt
caagtcgaaATTCGGCGACGCAGTAAGGCCAATACCCCCGAgagccgaaa
ataaggtccgcTTTTAAGGTTCATACATGCGTTGCGCACATTGAATTTGg
taaatcaaagatggcggcaagagATTTTGTTGATTNCTCAACAAATTTTG
ACCGGAAACGTTGAAGAAGTCACAACAATTGGAAAAGAAAAAGCTGTTAA
GtatgtttcttttttaagaGCCACTTGTTGATTTTAAATTGTTAAAGTTC
TGAACATGAGAGTGCTTCtggagcaagtgatttttaactcGTTCTAAAAA
ACCGTTTAAACATGGttaggccgatgaaatttacatatgagtttaccgtc
gtgaacttacccaaaaatagatgcggcatgatttcattattcattattca
ttattttcccaacagcaccttatccaccatttctgcTAACCATTctcagt
ctgtgccactaactcgatcgggaagattcttccggaatgggaagaacctt
cccgaacgggaagaacttactctaattttttctgcccgttttggaagatt
cttcctctttgggaagttgaaaattgactgaatctCGGCGAAGCTGTCcg
atgaccggcgaaagttgaaactttttggaggtgaaaaagcatcaaatctt
aaggtttttcaccgaaagaaaagtagactttaccgtagaaatcttgttaa
attgtgaaaaaactacgtaaacttcccaaacgggaagttCCAACCCGATC
GAGTTTTCCTTAGTTTCTCGCTTCTTCCTGATCTGGAAGTCCGTTAACCC
GTTTGGGTGTTaagttaatttcccgttcgggagaattcttcccatttcgg
aagaatcttccaattttggaagaatcttcccgatcgagttagtggcacag
actgttcATAGTGTAAAAATAGAACAATGGACTACATACGCAAGGCTTTG
GGATTAACATCAACCATGTCATATCAAAGACTTACATTCGATTAGATAGT
TGCGACTGGGGTTGCAAGACTTACTTAtaccttttcaaattcaattaaaa
aatggCTAGTGTCAAAGAAAACCAGCAGAGATGATATGTGTCCGTACCAT
ACTGCAAAGAACAcgtccctgtgtcacagacaaTGGATCGAATCTAAcag
ttcctttgttttcgagtgatatttcttttgaaattcagCGGTAAGTTTTA
GTTTCAagctgtcatttgtgtaaaaaccaggcagGTCGCTAGGccacgca
actttggtaggatttgttggcttcaaatcctaccaaggacaTTCAATTAT
AGTCCTTccggcttatacttcattgatcaCAGACCCGTTGTGACCCCAAa
ctactggaaaatttgaccaCGATTTCATCCTCGGTTGGAAAAATACTCTT
CAATGTCAGCCCTACcggaaaattgactttaattGTTTTCCcatttgaaa
attaaatcaaaagcAAATTGCCCTCCAAACCATCCCAGTGGATTTTTTGA
GCTGGGAATAAAAGAATTTCTGTGCCCAATGGGTTTTGGATAGAAATTTC
CATCCCAATTGTTGAAAAAGGTTCTACCGGGgtattgagacagggatgtc
aAAGATAAAGAATCGAGTGAGGATCGAACCTCTCAACCATGGCGTGTCTT
CGCCCTCTCAACTGACAATTAGGAGTGGAATTTTACGAGCTTCTCCACAA
ATAGAATTGGTTTTATAGAAAACGGATATGAGAAGATGAGAGAGATACCT
GTACTAGACCATAGCGGAATATCCAAATTAAATCCTGTAGGGCGTCGTTT
TTTAGCCGGACCTCTTGCAACTTGTCGCGTCCTTGATCCGAAGGCTAAAC
ATTGAGAAGTTTCAGTTGTGTATTTTTGTACTGGTGAAACGCAAAGCATA
ACGAGTAGTTTGGAGTCTCCACCGATTGTATCTTGAAGTATGTGAGTCAA
CTTGGTGTTTCGATACGGTATGTGGTTTTGGTTTTCCGATAATGCTTGAA
GGACGTCCGCTAGTGCACTCAGGCTAAAAAGcaaatgacaaaatgaaaat
agGCTTTTAACATATCGGGTACAGCATTTTCTTAGTAGTTTGTACCTTTA
GAATCTTGAATGTTTGAAGTTAAGGTTACGTTtaattacacttttttctt
gtaagaagaagTACATTAGTTTTCGAGGCTCGACTGTTCTTATTGTTTTG
TCCACTTCGAGCCTCAAACTATTCATTCGTTGAATGAGTTACCATTACTT
TAAttgggttttcaaaaaaatttattggaaATCTTTTTCTATCAATTGTA
AGACGAGTAAGATattaaaatgctagaatttCTTTGGAAGCGGACGGTAG
AGGAGAGGGGAGAGGGTCATCATAACACGAGCTAAGGAATAAATTTCCCA
AGTACTTAGGATGGGCTAAGATGAAATTTTCAGCATTCTAAAAGTATTTT
AGTCTAGTttcttactcttaggtgcctaAAACCCTCCCCCCgtttgatat
tttttcccaaCTACTTGGAACTTCTTATTTTCagcaatgtcaattgaatt
caatttctTCAATTGACATTGTTTTCAGCTATCAAATGAAGGGTCCCTTA
AATAGCCAGGCTTTAGAGATTCGAGTTTTGAAGAGTGTGCTTGCAGCTTT
CTTGtgatgaaatatttaataatattTATTCTTCATAAAGTGAATTTTAA
TCGGCTAATTAACATTTTTAGAGGAAATATCATAACTTTCTAATATtggt
gtgaaaaaaaaaaacaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttgtcag
atagtcccaagatagtcccaagttattgatttgataaCCAATTACTATCA
TATAAttatatctttaagaaaaaccaaaaacattgacctaaaatcaaagc
acaaaaagaagtGCCAGCCATAAGATTGACCCCCTTATTCCCCCGCCATT
TTGTGTGCCTTCGCCCTTggtttcctcaagtaactcaTATCGTGCATTCT
GATTGTCAGAGAAAAATAAAGTGGTTTTCGCGCATGAATTGCGTGTTTTA
ATTGGGTAAGATAAACTTGTTTTCAGATTATTTCAACCCGCTGCTACagg
aaacatatttgataaaatcaaagGTATTTGATCCaatcgaaggtattcaa
tatgatcgaagGTAATCGAATTAAGTAATCGAAACGATTGAACAAatcaa
aaatggtcaaagaaaatgccataatctggagtcgagtgagtattcgatca
ccgATAAAATTTATAGGTGGTCACTGACCACCTTTGATTATTATCGATCA
TCATTGATTACTTTGATCACAATCGAATGTTCGATTGGTACCGTCTGgat
taatgaaattgaatttgtcacattatATTCAAAAGCATCACTGGCTGTCA
CTGGTCGAAatatcgaaaaaattaaaaaacgtgAGGTTTCACTACCATGA
GTTGGCTGATTTCTTCAAAATAGGCGCGTGCGCAGTTAGTTTTCATATGA
TATAACAATCGCTTTAAATTATTAATGAAGCTTTAATAAGATTGACGATt
tgaattttcataaattttatctTCTAGACATCCTCAAGGCTTCAATGAGA
TGACGTTCGATATTGATTTAGTCACCAAATCTTTCGAAGAATGCCACGAA
AACCAACTTAACCTGGTGGCGTATGTGACAGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047400TCONS_00047400Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_127supercontigscaffold_127:226588..230969 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
90.3	91.85	87.14	92.81	66.25	48.68	128.8	133.63	66.3	54.31	46.7	34.41	39.73	35.87	52.01	63.88	66.14	72.07	33.77	55.39	31.75	32.78	61.12	52.65	105.05	132.46	100.28	81.41	130.53	107.33