XLOC_030196 (gene) - C. hemisphaerica

Overview
NameXLOC_030196
Unique NameXLOC_030196
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_127:10074..13490-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030196 ID=XLOC_030196|Name=XLOC_030196|organism=Clytia hemisphaerica|type=gene|length=3417bp|location=Sequence derived from alignment at scaffold_127:10074..13490- (Clytia hemisphaerica)
AAATGATTTACCTCCGCTTATATAGCTGTTGTCATAACAACAAATATTTT
TATCGATTTTTTGATGTGACCACTCGAAAAAATGGAAGAAAAAATCCTGA
ATTCGAGGAATCACCTGTTTTAATAAGCGAAAAATAAGACTTGCTCGATA
GCAAGTCTTATCGTAGTTTAAGAAGAATTCCTTTATGTTTAAATAAATAG
GTCTATTGAAAATGGCGATTCGTGTTTACTTTTCAAATTTTGAAAATTTA
GAAAAGATGTGCACATATTTTTTTGCACACGCCATTACATTCACACACAA
GAGAAAAAACAGAGTTGTGCTGAGGCGTTGAGGCGATCTTTCTTCTCAAA
GAAAAGCAACATGGAGAATTCCGAGCATTGGAAGTGGCTTCAAGCTCAAG
CATATCAACAATATCAACGACAAGTAACGTATTCAAACATTAGTTCCGGA
CAGTTAGCTGGTCCTCCAATTGCTGTTGGCCCTGCTGTTCCTGTCAGTTT
CAGACAAGCAGCTGAGCCTGATACATCGCAGTCAAATGAAGAAAAAACCA
GCATTCAAACAACGAAAAAGTCAGGTTCCCGTGCAAGATGGGGGCCACAA
CACGTTGCTGTTTTACTGGAGTCTTGGAAAGAGAACCAAGATGTAATCAA
ATCCCACAACGCGTTAACCGGCTGGAAAAATGTCAAGGCATCGGTAGATG
CAGCTGGTCCTTCGAAAACCGTTGAACAAGTAAAAGGGAAAATCAAAACC
TTAATCGATGCTTACAAGAAAGCAGTCGACATAAACCGCAATCAAACTGG
AGCAGAAAGAGCGACGTGTCCATTCTANATTCACACACAAGAGAAAAAAC
AGAGTTGTGCTGAGGCGTTGAGGCGATCTTTCTTCTCAAAGAAAAGCAGG
ATGGAGAATTCCGAGCATTGGAAGTGGCTTCAAGCTCAAGCATATCAACA
ATATCAACGACAAGTAACGTATACAAACATTAGTTCCGGACAGTTAGCTG
GTCCCCCAATTGCTGTTGGCCCTGTTGTTCCTGTCAGTTTCAGACAAGCA
GCTGAGCCTGATACATCGCAGTCAAATGAAGAAAAAACCAGCATTCAAAC
AACGAAAAAGTCAGGTTCCCGTGCAAGATGGGGGCCACAACACGTTGCTG
TTTTACTGGAGTCTTGGAAAGAGAACCAAGATGTAATCAAATCCCACAAC
GCGTTAACCGGCTGGAAAAATGTCAAGGCATCGGTAGATGCAGCTGGTCC
TTCGAAAACCGTTGAACAAGTAAAAGGGAAAATCAAAACCTTAATCGATG
CTTACAAGAAAGCAGTCGACATAAACCGCAATCAAACTGGAGCAGAAAGA
GCGACGTGTCCATTCTATGACGAAATCGATGAAGTTATGTCTTTGAGCCA
TACATGTAAACTCCCAGAAACGAAGGAGTTTGGTGCTGGTACCTTGAGTG
AACGAACACCACATAATTCGTCAGCAGAAACATCGGTAGAAAATTCATTG
GTTTTAGATGATTGTTTCAGTCCTCGTTCTTTTTTTGACCCTGAGGTAGA
AATGCAAGAAGACCCACATCTTATGGCTATTAATAATGCTAATGAAACTG
AGTTACATGAAAACGAGAAAACCGTTGAGCTTAACAACTCATTTGTCGAT
GAACTTCACGATGAGAGATCTAGTAAGCGAAAACGAAAGGCAGACGATGC
AAACAAAAATGAAAAGGTCGGAAAGGGAAAGAAAACCAATCTTGAAACTG
TTGTAAATTTGTTTAAAGAATCAGAGGAAAGCCAACAAAAATTTTTTAGG
GAGATGATCGAAAATCAGAGAAAATCCGACGCTGAGGAAAAAGCACGCGA
CCAAGCATTTTTTCTTGAACTTGCAAAAATTATGAAAGACAATTAGTTTC
ATGTATTACTTTTTCTTGTGTTTATTGGTATTTTCTTTTGTTTAAGATGA
TATATAACGATTTATTAAGATGATATATAACGATTTACATGTTAAAAATA
TGCTCTCTTATGACTTCTCGGATTCTGTCACCCAAAGGGTTAACTTCGTT
ATTCTGACGCAATCGGTTTCGATGAGCAACTCTCTCTTGTTGAATCAATC
TATCTAAAAAATTATCTTCGTCTAAATATTGTTCTTGACTAATTTGACAA
ATGTTATGCAGAATAAAACAAGACAGGATAACATCACTGACATTTTCGAT
TTCGTTATCTAGTCGTTTCAAGAGACATCTCCATCTAGCCTTCAGCAATC
CAAAACCTCTCTCAACAATGCTTCTTGAACCAGATAAGCGTCGGTTAAAA
TACCTCTGTGATTGGGTTAAATTACCTGCATGTCGGTATGGTTTGATTAG
CCAATCAGATAAGGGGTAAGCACTGTCACCAATAATCAGTGGTCTTATGA
CTACCTGTTCAACAATATCTTGGGGTGCTGTCAAATATTCACCATTTTCA
CAGCGACGAAAAATCAAAGTGTTTCTCAAAACTCTTGCATCATGTAGACT
CCCTGGATACCCTGTAGCAACGGAAAGGAATTCTAAATTGCTTCCTATTA
CAGCTTGGGTATTGACTGCGTATCTCTGCTTTCTGTTGAAGTAGTCGCCT
TTGCTTTCTGTAGCCGGTGTCAAAATTTGAATGTGTGTTCCGTCGATAGC
ACCTAAAGCTTGTGGAATAGGACATTGCTCTATCTCCTTGAATTTCATGA
TTGCTTCGGCGGTTTCTCTTCTATTTGAGGGGAAATGAATGAAGTCTGGT
CCAAAACGGATAAGGGCACGACAAAAGTCGTTCGTTATTTTAACAGCAGT
CGATTTGCCAACAGCTAATGTTTTACTGACTGTCCGGAAAGAGTTCCCAT
TAGCCAATCTCCACAGCGCAACTGCTACACGTTTTTGTATAGGGATAGCT
TTACGAAAGTTTGTATCCCTTTTCTCCAGCGCAGGTCGAAGCAAATATAC
CAGTTTTGAAAAAGTTGATCCAGACATACGGAAGTCAGCTTTCCAACGTG
CCAAATAATCATCATTAAATCTGTTGTTCCAAAGTTCGTCGAACCATCTC
TCCTCTCTTTCATATGCCCAGACACTGCGCGGTTCTCTTCCCATCAAAAA
CATCAAAGCAATGCATTTAAGTTTATTCATAGATTGAGACATGGAGTACA
TTTGGAACTGGAGATATCTCATACGTTTCTGTTGTTTTCTGTTCCGACTT
TTCCATTTTTTTAACAGAGCAATGATCAATATTCTCTGTCTGAGATTCAT
GTTGAGTGATTACTATTTTTATAGTTCACGCTTTTTATTTCCAATGAATT
TTTATCCACACAAATTTTTAGACTTATTAGAAATGCTGATTGAAGTTTTC
CGACGCGCCGCTTAAAATAAGCAAAAATGGTGATTCCTTTTTAGCATTAG
CTAAACTTATATTTTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047412TCONS_00047412Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047412-proteinTCONS_00047412-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_127supercontigscaffold_127:10074..13490 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.09	0.1	0.1	0.11	0.05	0.16	0.31	0.33	0.38	0.21	0.16	0.97	0.44	0.11	0.15	0.13	0.15	0.52	0.74	0.23	0.16	0.05	0.15	0.13	0.12	0.23	0.17	0.15	0.1