XLOC_030210 (gene) - C. hemisphaerica

Overview
NameXLOC_030210
Unique NameXLOC_030210
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_128:68844..73911+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030210 ID=XLOC_030210|Name=XLOC_030210|organism=Clytia hemisphaerica|type=gene|length=5068bp|location=Sequence derived from alignment at scaffold_128:68844..73911+ (Clytia hemisphaerica)
AGAACATCAAGAAATGAGAGCCTTCTACCCCCGAGGGATTGTGTTTGGGG AGTTTGTTACAAGCAGCCTACGCTTGTCCTTTACgtatttgaaaatcttt cagAGAGGATGATATGAAAAATCCCAAATATTTGTAATTGAGATACATCC TACACGCATGTGctgcaattttttttataatccCAGAATTAAATATTTAT CCATTTCTTTttagaaacataaaaaatgacataagggTAATCTTTAAGAA ATAATTGAACCATAAATCCATAACAATGGCGTCAGCAGATGTTGGCGATA ACGTTTCATCCAAACTGTTCTTTTGCCATGTTTGCTCACAAGAAGTCGGT GCAACTGAGGTaaatacaaaattttcatttccaaTAATTTTTAACCATCA CAGTAAAAAGTGGGCAGAATATCAGGTTAAGAAAAGCTATCATGCTCAAA AGGGGTCAAACACtcaaaatacatttttcacACCCTGGTAATCTGAATTT TCCTGTTACAATGTACTAATTACTATGTGATTGTACTTTGCAGTaccatg atttaaaaaaaaatttacatcagAAAACCATTATCAAGTGCTTTTGGATT TCAAAAAGTagaattaattatttttattcCTTGATTGCATAACTCCCAGA AAGTTAGCTATGTTTTCCAGGCCGTCTTATTTTTGTAAAACTGTTGATAT CTTTAGGACTTGACATGTGCAATCTGCAGTTCTGGTGCAATTGAAGAACT TGAAACTATCAACACATCCCAAGAGTAataattatcatgtttttagtttt tatatCATCATCACcagtcattttattttttttagtcaCAATGAATaggc caaaaaaaattcaattcatgGGTATTTGTAACTGAAGCATTATTTATGAT AGAATTCTTTAATGGTGATGATGAGAGGTCTCTGATTGACACAGTTTCAG AGTTGAAAGcctgcaattataatttttctaTATCTCTCTATGATGTACTG cttatttttgataattattgTCTAATTTAGATATTTCACctgtatttttt tcagacccacTCAAAACCAAGAACATGATGAACAGGACGATTTTGTAAGT GTAAGTGTTGAATGAAACAAAGTCAAAACGTTTTAAATTGGTGACCTAAT TGATGATAGCATTACAATTTTATTTATGCAAATTCTTTCTGTCCAttact tttttgtttataatataGACTATAATAATGATTGTATTTTTTAAACTACT ATAGGATGGCTATTCTCATTCTTAGGGAAACTCTCCTGGTGCTTTTACGG GATCTGTCTGTTATTCTATTCCAGGCATACCAGCTGGGGGAGTTTTCGTT GTAAAGTGGCAATAGGAAATTTTTTCCGGTaatgaaaaagtttacaaaac cTCCTGTTAATTGAAGGATGATCGTGTCATGAACAATTACCctaattata tattatattgaaAACAGAAACAGTTATATCTATAATGCTTTTGATCTTTT GTGTTCTCTTTAGTTTTGGGACAACATGAGCAGAGGACGCAGGAGAAGAG GTActtcaattcaaaaattgcaaatttcaaATGTATTTTGTATTTACTCT GTATTTACCTATCATAAAttcttttattaatttctttcaatttttctatt tccaacctaaaattttatattCTTCTATTTACAGCACACAGTTATGGTTT ACGACAAAGCACCAATCAAATTCCCAGGCGACGTCCACAAGTCATGGTGC ATATTGGTTCACCAAATAATTCATTCCAAATGCACAGCACAAGCAGTGGT GGACCTGATCTTGATATGTTTGTTCAACAGCTCTTTGGTAACCTAGGTGT GCAATTCTCACGGAATGGCTTTTCTGCAATGCCTATGGGAGGCAATGGAA TGGGTTTTGCTGGGAATTTAGGAGATTATGCTTGGGGACCAAGCGGATTG GATAATATCATTACACAATTGCTAAATCAGTTGGATAATTCTGGTCCTCC GCCTGCTGAACGAACTAAAATTGACTCACTACCTATTTATGAAATCACTC AAAAGGACCTAGGTATGTTGTATTTGTGTAGATTCTGCATAATACCATCT CTTTTTGCAATTAAGAGGCTGCTTGCATATTAACTGCCATGAAATAACAA AACTTAAAGAACAACACCTTTATCCGTGACCCGATGATGTTATTTAAGTC AGCGAGAATGAAATTAAGCTAAACAGGGAAGAGAAATTGCCTGTTTGAAT GGGTGGGGATTTCTAGTTTTATTGATTACAGGGGATTCTTTGAAATTATT ATCATTGGCTTTCCTAATGGTAATGGGAATGAGAGGTcattgtgtatatt ttttttcagtggagGAAATGTCCGTTTCAGTGCGCCTCTATACTGTCAAA GCAGAACGAACaagaaaatttcttaaaatttgtgCTCACTGGGATCTGAA AATGGAGTAAATAATTAAATGTAGCCCTTAATGTAGCCCTTTAAATATTG ATTTCATTTCTCGTAGACGAAAAATCAGAATGTGCAGTATGTCAAGATCA ATTTCAATTGAGTGAAAAGGTCAAACAACTTCCATGTAAACACAACTTTC ATACGCCATGCATTGAACCTTGGCTAGAAATGgtaagatttttcttttta tctattctctcaatattttattttttaaagaaaagcaGTTCTGATAATGT ATTTGTTTGTCATCGAAGGATGTTGTCTGGGACAAGCATTACTACAAGAG ATATACATGGATTTCGAATTAGCTCTGTAAGAAAAGTCTCCTTCAGATCG AGATACAGTAATAAAATCTTcctaaaaactcaaaatcatCAATTTAACCA TTTTTGCAATCATTCATTATAGACATAAATGAACAAACACAATATGCAAA GGTGCACAGTTTTTGGCCAATCAGAGAGTTCACTATAATTTTTCCGAGAA TTAattctaaagtctgttcacgatataagtgtgcactcttttttctttta cccaTAAACTTtcgaaggaattcttcaatctttataaaatttggtatcgt tggagagatactTGTGAGCGGaacaatttgaaagaaaaatgtctttagaa aaattctaaaaacgaagacaaaaatgaagaagaaaaaaatgaagattttg tagagaagtgctataactttcatttttactggaGAGATTTTTGATCTTAG GAAATCATCACTgtaaagaaatttcactaaaatatttattcaagataaag ttatgatacaaagttaataagtgattgaccccaaaaaaacagcagaaaac agcagaaaacagcgttttttgacgtcaatcagcttataactttgtttgat atcttttgactgaatgattatttttgagaaatcttttcacagtgatgacg ttcgacgATCAAGGAtttacttcagtgaaaatgatagttatagcagtTTT Ctacaagattttcatttttttcttcttcattttcatcttcatttttagaa tttttttatagatttctttattccaaattgttccactcactaatatcttt ccaatgacaccaaatttataaagattgaagaatttcttctaaagttatag gtaaaagaaaaaagagtgcacacttatcgtgaatagactttaattccTTG TATTTTTTTGGAGTTTATGAGACTATAACTTAATATAAAGATTCTTCTAC TTATTTTACAGCACGACTCTTGTCCAATATGTCGAATGAATNTGATTCTT TTACTTATTTTACAGCACGACTCTTGTCCAATATGTCGAATGAATTTGAA TGGTGAACGATCACGTGATGACAGATAACCCAATCATGATTCGAGTTGAC TGAGGGGATAGCCAATCAAATATTGAGTTGATCGGATACACAACCAATCA TATTTCGAGTTGTTGTGATTGAAAGGAGAAGGATGCGTTTGTAAAGGGTA CCTGTTGAGGTGTCAGACGGAGATAAGTGTGGTATTATCATGGTGACTTT CTTGCCACCAGCTAACGTGTATCAATTAAGAACATAACTTAATCAAATAA AatacttgaaatggaaattgTCGATCTTCAGATAGAATGGTATCGAACAA CTGAATTTTTTTCGTGAACAAAAACATACGACAAAATATCGGAACATTCG TTCTCTGAAAGAATCAATACCTTTGAAGGTTAAAACTCCGATAAAGACGG TTGCTTTACGCAAGTTACAAACGTTAACCTAAAAGTCAAATATTTTAGAT AGTGAGACTTTCTTAATACCATCATAACATCCTGGAGTGTATCAACTCCT TGTTCTGCCTTATTAGTAAAAAGTCAAAAGGTTAGTCTAtattaaaatga atttttacaGGGATTTTGCTCTCTGGCCAAATCTtaattttcaaacattc ttCACTTTTTGTTGTTTAGTTTATCTACCCCTCCTTGCCTTTTTTGGCAA TCAGTATTAGCTATTTATGTATCTTGACATCGAGTTTTCCCTTTTAAGcc gttttgtttttgtgtttaaaAAGAGCATGCACTTTGTATTGTTAGTTTTA TGTTAAAATTGTAACTCGGACAAAAATGATCACGGTATTTTAAGacattc ttctttttcttcttcatgtcccaccaagatttttttgaagatgCTAGCct tttagaacaacaaatttctttcatccCAAGGAGTACAAATTGCCAGTCAG TGCCGGTGACTCATATTATCTATTAAGCTTGGCGAACACTATTGCAAGGG ACTATTTCGGCTGTATTTGTATCAACGATTACGACAAATTGTTCTGTTTT TTTAAGTTTGGagcttttgtttttttagtgCTAGGTCAATAATACAGAAT cgtaaaaaattggaaaaacgtTGTTCATTATTTTAGAAGATTTATTTTGT Ccataaaatatcataaattttttgaatgtaaattttatagcaataatttt attacaagtttaTTAATGTAAAAATTAAACCCCCTTTTTTGTTCGTTAAA AATTCCctttaaaaaatttaacatctatattaattttttaaatgaaatag aCCATTTCCCATACTGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047431TCONS_00047431Clytia hemisphaericatranscript
TCONS_00047432TCONS_00047432Clytia hemisphaericatranscript
TCONS_00047433TCONS_00047433Clytia hemisphaericatranscript
TCONS_00047434TCONS_00047434Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047431-proteinTCONS_00047431-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_128supercontigscaffold_128:68844..73911 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.58 14.21 13.84 11.11 16.29 12.01 18.4 21.21 19.49 18.67 20.36 17.17 18.77 15.13 16.16 17.77 19.13 21.48 22.28 34.16 20.36 20.7 18.19 21.04 14.97 20.32 31.61 45.35 26.81 22.7