XLOC_031953 (gene) - C. hemisphaerica

Overview


Name	XLOC_031953
Unique Name	XLOC_031953
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_172:104983..114545+

gene from alignment at scaffold_172:104983..114545+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_031953 ID=XLOC_031953|Name=XLOC_031953|organism=Clytia hemisphaerica|type=gene|length=9563bp|location=Sequence derived from alignment at scaffold_172:104983..114545+ (Clytia hemisphaerica)
CCGCTTGGTATCGTTGAAgatcatgatcaaaagaaacaaAGGTAAAAAGG
TATAGGTAGAAAGCTTCTGGAGTAAATCTCTTTCTTGAGTGTTTggaaaa
tgggctcttccagaaaaatctTAGTGTATGTGGGGGGGGGAGGGATGACA
GGAATTTTCagatgaaaaaataactcaaattccaaaattttttatattGC
AGCGcctaaaaaattgtgagtatcgaTATCGATCAGATATAAGATATTGA
TTATTTCAATTAGATATCGATCCAAGTTTCATCGATATTATCAATTATTA
ACACTGTAAATCAATAAattatcgattaaaaaaatCTATGGTGATAATTT
AATTGAGTGCTAAAAAATTGTAAGCATCAATTAGCTATCGATTATcgttt
ttaatcgatatttaatcaatcgattaattatcgattagctatcgatttta
atcgataatcaATTTTATCGATTAGCGATTATTAACGTCTGGCATTAATT
GAAATCTTGAcattaggcggcaatcacaaatatcttcgttttgcgtcgcc
cgaccgactcctgaaaattgagtaaaattgagTCGGAGAGTCGGTAAATT
Cttcttactttttgttttgatgacgtttcctttgctcaaaatttttatta
ttgtcaatttttgtgagCGATTTCTAGCGTCCATGCATCgtttttagatt
tagatatcactgttgaaaacaatatttttagatacaaactttttgataag
aGAGATGCCTTTTCCCTTCTTCATTGTAAGGATGCCACATGCCGACAGTA
ACATCCCATCGTGCATTTTTTATGGATCcatcttttcagaaattttaagg
ATAGCACGTAGCACACTCATGTTTGAAGATATGACTCCTAGAGTCACTGA
GCTTTTCATTCGAATGCGAAACCAGGGAGCTTCAAATGCTTTCTTGAAGA
AGcaagttgtcaaatgtttttcgaaGTTTCCGGACTGTTTTATGAATTAT
GGGAAAACCGTCgaagaatttttacatattttcaaattgtgaaaCAAATG
GACCATATTGTGTGTGTGTGAAAAAagtccctgaaataatttgaatcccg
aataggggaatttcctgtagtcacgtgacaactaagctcatattctgaat
ttatttttggaatatcttcttgacatgtgaacttgcatccgttttttatt
tgaagtcaatccaaccatttcctgatgactggtaagctttttaaaaatgg
tctcTAAATTGAACTAACTccaaaaaaggggaatttcccatagccacgtg
acaactaagctcatattctgaattttcttttttggaatgtttttcttgac
atgtgaactNataggggaatttcccatagtcacgtgacaactaagctcat
attctgaattttcttttttggaatgtttttcttgacatgtgaacttgcat
ccgtttgttattcgaagtcaatccaaccatttcctgacatgtgaacttgc
attcGTTTGTTATTcaaagtcaatccaaccatttcctgatgactggtaag
cttttgaaaaaagtcactgaaataatttgaatcccgaataggggaatttc
ccgtagttACGtgactaagctcatattctgaatttttcttttttggaata
tctttcttGACATGGAACTtacatccgttttttatttcaagttaatatct
tttttcgttaAGTTTTCATTGAGCTTTTTCGAATCTCGAATGCGAATCCC
GAATACCGAATACCTAACTCCAGCGAATCTACCATGAGTTgaggctcttt
cattttttaatatcCCTGTTCGGGCAGAAAGTAGATTAAAATGCTATGTT
ATGCTATTATGGTCTATAAAAAAGAGAATGGAAGTAAAAGATGGGTATTT
ATGCTAaccatccctgtctcactgaaagTATCTTCTTTATCTCTAAGGAA
TGAAGACACAAACCTTGATTTATATTAGATTTATTTatattcttcctttt
tcttcttcgggatgtagaaaaaaatggatttcagatggttttggagtcat
tttttgctggattttttatgtctgagcaacagaaagtttgaaatatattG
TGCATTGTGTATCAAAAAGTCACCTTGTTTTGTTGTTCTAAATCTGATAT
CTAGTCCTTCTAGTTTAGATACAACCCTGTCCTATGAATGACCTATAAAA
TGTTTCAcaagaagaataaaattcatttctttcttttcaattattgcaag
tttcttgatttttgaagttcattttgggacatttcgcctgttttttcttc
cccgcctccttcttaaaaaaaattcacttttttctacgCCAATCAGATTC
CGCGTCTTTTTCCCGATCAGCCAATCACAGTGGCTTGCAGAGGGCATTAC
GTAATTCtttgtctggtctgtaattttgatgtttcctcgaatccaatgaa
ttttctttagcagAGTAATGGGGCCCACTAAACCTGCAAATGCAGCGATT
GTATTGGCTATCAAAAagccattttagatttttttgaaagccaGATAAAT
TGGGGACCAAACCGTGGGTCGGCCCATGTGGCTTAGCCCTGACCCTAGAT
CAGGTGCCCCTATGCACAGGCCACCCTAAACAGTTGTTTTTTACCCTTAA
CTATCGGCCGAGTCgttgcttttttttatatacagcAATTTTAGGACCTT
ACTTCAGTGGTCGTTTACTCAcggtttttgacagttttaacaaaagagtt
TGCCCTAAACTTCAGTTAGGTTATATTTTCACATTATATCAATTACACAA
TATTCTGAACTACTTGTTTATACGTTTGAATTTGAGCTCAAAACTCTTca
ttatgaaaatcaaaaaatttgaaaaatttgataaattttactcaaaattt
actTGCTATGCTCGTTAAAATTACCGGCTAACTTACatttccttatttgc
agcactgcatATTCAGGGTCATTGTTCTTGTTTACTCTATTACAAAAAGC
CTTTTTTTAATGAGGAGCTTATTTGTCTAATGTTCAGTATGAAAAATTAA
TATAAATTTGCTGTTTATTAAGGTATTGGGTACTGTTTTAATTACCGCTC
GCCAAAAATATTAATTATATTTATTAATTCTTTGTCAAACCAAACAATAA
TAGCTGCattttttttcactgttcaactatattttaattctttttcagtC
ATATTTAAATGACTCACACACTTccttctttttatttatttctagccagc
agcgtggtggcaggggggacTTTTTTGTATAAACTTTTTGTGAAATGTCT
TTTTTAGCTTTCATTAGTTCAAACTTACAATGGCTGCGTTGGTACCATCT
TTTATTTCCCTACTGTCTCAATTTTCACGAATCATTATCAGACATTCCTC
AAGCAAAAGTTATGATGTAAAGAAGCTAATTATACCCCTTCCTAAAACAT
CTCATATTGTCCTTAGCAACGAGGTTGTCAGAGACagaaagttatttttt
attggtGATGTTCATGGATGTTTAGATGAATTGAAAGAACTACTCCAAAA
AGTAAACGAACGCTTTTCAACTGAGGAATACCTACCTATATTTGTTGGAG
ATCTTGTAAACAAAGGACCTGAGAATGTTGGCTCACTTCAATATGTTAGA
AATTTAGAGCATTTTGCAGTCAAAGGAAACCACGATGCAGCTGCACTGAG
AGAAGTACTCATGATTGAAAAACATAATGATTATGATACGCCAGCCTGGT
GGCAGTGGGTTAAAGGTTTAAATTGTGATGACATTGATTATTTAAAGGAA
TTACCATACACATTAAGTTTTCCAGATTTCAATGCAATTGTAGTACACGC
AGGTCTTTTACCAAAAGTTGATTTAGAGAATCAAAGTATCAAagatatga
ttttgatgagaaacATTGTTGAATTGGATGCAGAAAATTACCAGTCAGCA
GAATCCCTTGACCAAGGTAAACCTTGGGCATCATTATGGCCAGGACCAGA
GCATATCTATTTTGGCCATGATGCTAGACGAAAGTTTCAAAGTTACGAAT
TCGCAACTGGGCTAGATACAGGCTGTGTTTATGGTAACCAATTAACAGGC
TTACTTTTGGATAAAGAtggaacaaaagaaattatccaAGTGCAAGCTAA
AAGTGTTTACCAGAAACCAACTGGTTAATCCtggttattttacattcatt
ctCGAATTGAAATCacacaattttatttttgtatattttgcaCAATTATT
TAAGTTATTTTAACCAATGTAATATCTAAATTTATCTTGATTGATCGGCT
TTTATATCAACTTTGTAATAgattaaatttgaatttattaaggttctttg
tttttttgggaaatcagttgaaattgttttattttcaattttaaatttga
atttttaattcAGATTAATTAActtaaattcaattgtttttctttatgcC
ACCTTTATCTGAAATCTGTATCTGGTTTCTTTATATATAAGTATACCTAA
TTTTGCATTCATATATATAGTAAACTATTCtcatttttagacaaaaaata
TACTCATAAATGCAACTATCCACAACTTGAGAATCTTCAGTTTTTTACCC
TAAAACTTGACATGGCTACATTGGTGCAAAATCCGCCGCCATCTGTTACA
CCTGCTGCAGATGCACCTCCTCCTCAACAACAAGCTCAACCAACACAGCA
ACCGCAACAACATCAACAGCAACAGCACCACCACCATGGCGGTAATTACA
ACCAGCGTCAACAATTCCACCATCACCAACATCAACACCATCGGCCACAC
CATCACCACCATAGGCACCCTAATTTCCAACATCACCACAACCGACAACA
CCACCATCATCATGCGTCTTATACAGCAGCTGTCCCAATGATCTTTACGC
AAGCTAATGGCAGTACAACCACTTCAACAAATTTATTCAAACAAATCAAT
ATTATTCCAGGTCTAGATGCTGAAAATGCAATCGTTGATACAGGTTAGTT
TGAGATTTGTTTTACCAGATGTGATATGTAGATACAGATTAGTTTGAGTT
GCTGTCTGAGTTTTATCAATGATTctcctattttttcaaaatgctaaaat
ataatTGGCTAAAACCAACAATTAAAAATTTGTCTTTTATACTAATATAG
TATTTGTTTTTAAGCTAtctttcatgcattttttttGGTTTATAGGTGTA
AGAGTTTTCAGACCAAACACTCAAGTTCAAACACAAACTGCGCCTGCAGA
GTACGATGGGAAACGAATGCGACGCTCCATTCAAAGGAGAACTGTGGATT
ATAATGCATCAACAATACAACTCTTAAAAGTATGTTCTTTTTATTGAGTT
TTTCTTCTCTCTTTGTGTGGTTGTGTATTATTTAAGAACAATTATTTTAA
ATCTTTATACCAAAAAAGGTATATTTGCATATTTATTAAAGGATTGAGGT
TCAAGGCGCGCCGTGGGCCTCTAAGAACCTGTCTTTTTACAATCGCTTGt
tgttacaattttctttaggtaaagttttgttctggggcttcccctaactt
taaattgaatgtttttgtctttcatttgagcattGAGCTCATGTGCTCTC
TTGCACAATTCTTTGATTGCCAGGTCTTCTGTTGCTCGATAGGATGAAGG
AGGGCCTTTGTATGTCGCGATGGCTCTCAAGACTTtgttcttgtcttctt
cattttcgaatacTACCTTGATTAGTCGATACTTCCCTTTCTCCTCTCTT
TCTTCATATTTATTGGTCTGTAAAATGTTCACAGTTAAATCTTTCAATCT
ATGGTAAGTGAACCCAtgaccttgcgcaccgtagttGAAAGCTCTGCCTT
CATGCTTGCTAGGACTGCTATTTACAATTTCTTTTGTCTCTTATTGTCTG
TGTTATTGTTTGCAAAGTTCAAGTTCTGCTTTCTATCTAATTCTTTTGAT
TAACATTCAATTCATTTTAGACCCactcatttttttctattttagcatcg
ATTATACAAAAGATCCATTCTTCAAAAACCAATTGTACAATGTGACCCAC
TTTATTACACAGATGTAAGTTATAAACATTGATGAAAACAACTGACTGAG
ATTTAAATCGGCAAACAAGAAGAATATCAATTAATAAGAaactatttcat
tgatttccCTTTTAATTGAATGCTCAAAAATTTATCGAACAGCCTAACTG
CATGGGGGTAGATCTATTTAATCCTGCAATAGGCTCTGATTTTTATTGTT
TGCAAGCACATTCTGGAAGTAAATTTATATTCATTTGggtataacttttg
atccaatggaccaaattttaaaaataacatattaaaatttaattttatct
ttcttctttccaacgcaaaaataattattattttttaattcataGTTTGA
AtgagaaaatcaaatttgaagagAGAAATATTTTGTGGCACACCCCGTAA
TTTAAGACAGTACTACTCCCTCCAttgtttttcttcttaaaaCATATCTT
TATTAAGGAGATTTGATTCTTTGGATTTTTATCATTTAGATTGTTCAACC
TCGCTCTTTACAACACAACCCAGTGAATTCTGTAACGTCAAGATTTGTAA
GGGCGTCCACAAACAAAGTTAGATGTCCTGTGTTTACCGTTGCTGTAAGA
ACTCTTTcttaaaaacatcatttttgttttattacatagcgtcagccccc
cctGCTGGTTGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNATACACTCACTCTTGTTAAAATGATAGcacttt
ttgaagttttcagCAGAAGTTGTTATGTGCTATTTTGTTAatccttttaa
acttttttcttagtGGACACCTGAAGGCAGAAGAGTTTTAACAGGGACAA
GCAGCGGAGAATTTACACTATGGAATGGATTGACATTCAACTTTGAGACT
ATTCTTCAGgtaatttaaattcttttttttgagATTGCGGCCGCATTCAA
AAGGCTCTTTTTTCCAACAATCGATCTGAAAGTAGGGGAGGGTGCCATTC
ATTCActctggattgctccacttaccctatccttctctttaattactgaa
catcaagcagagcagtatcaagtaccattttgtaaAAGTacaaatctttg
gtatgaccaaGCCAGGGATTGAACTCGCAACCTAGCGCACTATAGCCAAA
TACTCTACCCTTGCATTGCGGTTGCTTAAAATATTAGATATCTctgaaaa
aatactttgataTTAAGAGATGTACTATTTCAGGCTTTTTTATTGACTCC
TTATTGACTCTTTATTGACTCGGTAGCAGTTTATCATCATTTAAGATTTA
GCTGACGAGATTTTAGCTGATGTAAACCACTTTAAACCACATGATTGAAT
TCCAGGTATGAATTTGTCTGTTTCATTATTTACAGGCACACGACAGTGCA
GTTCGAGCGATGGAGTGGTCTCACAACGATATGTGGCTTTTATCAGGAGA
TCACAATGGAATCATCAAATACTGGCAAAGCAATATGAATAATGTGAAAC
TAATACAAGCTCACAATGACCCTATCAGAGGATTGAGGTGTGTACTTTTG
CTCGTTATTTATAAATCAGGGGGATGATATTATCGTGTTATAGCCTGTTG
CAGAGGGATGTTTATTCACGATAACGATTCAAAAGAACTTTTATCAATTT
CGAAGACCAATAGTACTTAATGACTCTATTTTGATTATGAAATctatttt
aaatctattttgttGATTAAGCTTTTCTACCCTTTGTTTAATTAAAGGGT
CTGTTCTTTTCGTTTAGTTTTTGTCCAACCGACAATAAATTTGTGACATG
CTCTGATGATGGTCTACTTAAAGTGTGGGATTTTTACCGATGCTTAGAAG
AACGAGTGTTAAGAGGTAAATATTACCTTATATCATTTAAATTCAAAGTT
TACCATGTTGTAAAATTGAAACAAGAGAATCCCCAAAGTAGAGATttgta
aatcaaaataaacataGCACattattttcgttttttatttcGACCCCTTT
GGTGTCTAAGTTccatatttaaaagttttttccctgcaaagcaatatttt
tacaaagGAAAATATGCGACCTCTAACTAAACTTTGCGCTCTGAAATTGA
CGCCAAGTCCAGTGAAGTGAATCACTTAACCTCGCCATGGCTAGCTCTGT
ACCTAAGTCAAATGAGCCACCTTAACAATAAGGAATCTGCTGCTCAGATG
TAGTGATAATAATTATCATATTTTCTACACAGGCCATGGAGCAGATGTTA
AATGCGTAGGCTGGCATCCCTCAAAAAGTTTGGTAGCCTCCGGAAGCAAA
GACAGTCAGCAGCCTCTCAAATTGTGGGATCCAAGATCAGCCAGCAGTCT
AGCAACAATGTAT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00050452	TCONS_00050452	Clytia hemisphaerica	transcript
TCONS_00050453	TCONS_00050453	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00050452-protein	TCONS_00050452-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_172	supercontig	scaffold_172:104983..114545 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.6	30.05	37.32	30.42	47.1	35.49	27.63	30.95	15.74	19.23	19.21	13.88	16.47	19.9	20.01	23.29	21.69	21.43	7.59	9.92	20.86	21.77	36.13	31.38	25.49	29.04	9.79	7.56	20.73	24.81

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XLOC_031953 (gene) - C. hemisphaerica