XLOC_031999 (gene) - C. hemisphaerica

Overview


Name	XLOC_031999
Unique Name	XLOC_031999
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_179:428551..435615+

gene from alignment at scaffold_179:428551..435615+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_031999 ID=XLOC_031999|Name=XLOC_031999|organism=Clytia hemisphaerica|type=gene|length=7065bp|location=Sequence derived from alignment at scaffold_179:428551..435615+ (Clytia hemisphaerica)
aaaatcGTCTGCTAGTAGTAGCAAATTTGTGTAAGCACAAATTCTACAct
ttttgtctgtttttttttaacaaatttaacCGAGACACGCATAGAGGAAG
ATATCTTTCGCCATGACTTCGGGTAAGTACTGttgttttaaaatatattc
CAATGTGGAAATTCGGAAATTTTGCCAACCTAAggaaaattttatcataa
ataGAGTTTTTGTAAATTCAAAAAGTAAGTTAAGGGATTTAATTTCGGCT
TCATAGCCAACCTGTTTTTAGGAAATTAAACATCGAGCATTGCCCGAGTT
TTGTACTGTATActcaaaatatatatattttttttaattttttttttttt
tttttttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTATGTCTGTTGTTGCTTTGATTCTATATCGtggtctt
ttttctttagctcatctttagCGATGCTAGCGTATGTCTGCTGTTGTTTG
GATCCTTTAACGAAATAATCTTTGTTTACAAGATCGTCGATCTTCTTCTC
CAGTCTATCCAGTCTAGCGAAAACAGATTGCTCATCTTGATCTTTCTCTT
TACCTCTAGTATTTGTTGCCTTGTTATTGGtcgttctttgtttacttgtt
ttgaaCTTCTCTAATAATATTGGCGTGACCGTGATGCATTTCGCACATTC
GAATCTCCTTGCTTTGTACTGAAGGCAAATCTGTACTTGGTAGGCTGGAA
GCTCCGAACAGGCATAatgaacaaatctttgacaCTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAATATA
TAGATTAATTTCTGATTTAACTTTTTCCTCGATAgttttctgtaaaatat
ttcttatatttattatttacgATCGGTATGAGCTTACCCATGTTGATTTC
ATATGAGATCAAACAATTCATAAAAACATAACAACCCGagggtggggggg
gggtcaatCGATTAAAAAAATGACGAGACGtccggcccaaaattaggcct
ttgaattagacccttacaatgcagaaaatcttttgcaaaatttgagcaaa
aaatctacccttacggtgcattttcttgaaatcttttgaccattttcagg
caaaatatggttagattttcgaaattttacacccttagggagtggtcaga
aagtatctactaggggggagtggaggatattttgaaaaatcccaaaaaac
tttcgcaccccctcccctagcctggaaaaaaatttcgaaccccccctcat
aaggcccaatattttttcgcccccccccccctagcctggaaaaaaatttc
gaaccccccctcataaggcccaatattttttcgcccccccccccctagcc
tggaaaaaaatttcgaaccccccctcataaggcccaatattttttcgccc
cccccccccctactagaaaaatttttacgcaaaaaaagaattcctacaga
tgcggtacaaagagtattatttgtttgtatgacagttttttatgtcaaaa
ttaggTAAGGGAAATAGTTTAGCCCTGTAAAGTTGAGTTTAGTCCATTag
gagatctaccattttgattgacgtttacaccacgggattttttccgtcga
tttccatggttacgacggaatttctctgaagtaaacaaaagaaaaaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNAAAacccgtggtgtaaacgtcaat
caaaatggtagtgtGATCTCCTAAAGGAATAGTCCAGggttaaaataaga
atcaaCGAGTTATTTTCTCTGAGTTTCTCTAAGTTTTGGGAGAAAGTTAC
GGCTTATTTTCCCTGATACACAATCTCCCTACATTACAGAGGCATCTCAA
TTACTCAAAATATCCTGAggggccaccatggttggccccgAAGGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAACAAATTTAACCGAGGCACGCATAGAGGAAG
ATATCTTTCGCCATGACTTCGGGTAAGTACTGttgttttaaaatatattc
CAATGTGGAAATTCTGCCCATTTTGCCCACTTTTATCATAAATAGAGTTT
TTGTAAATTCAAAAAGTAAGTTCAGGGATTTAATTTCGGCTTCATAGCCA
ACCTGTTTTTAGGAAATTTAGCATCGAGTATTGCCCGAGTTTTGTACTGT
ATGCTCAAAATATATAGATTAATTTCTGATTTAACTTTTTCCTTGATAgt
tttctgtaaaatatttcttatatttattatttacgATCGGTATGAGCTTA
CCCATGTTGATTTCTTATGAGATCAAACAATTCATAAAAACATAATAACC
CGGGGGTTAAAAAAATGACCAGACGTCCGGCCCAAAACTAGGCCTTTGAA
ATTGGACCCTTACAATGCAgaaagttttttgcaaaatttgagcaaaaaat
cgacccttacggtgcattttcttgaagtcttttgaccattttcaggcaaa
atatgtttagattttctaaattttacacccttagagtgcaaaGTCTTTAT
TCTTACATACTTTTAGCAGTTAAGAACGCGGTACCAACATAATAAATCGT
TTTAGCATTATTTTATGTAAATCATAACagtgttatttttttatttttta
aaggtaCAATGGAGGAAAGCCAGCTTCGCACAAGCACCATTGAACTCATT
TCATCAATCCATGGCACCCAAAGACGTGCTGAACGTGCCATAGATGTCAA
GGATCTCAAATCAGCAATAAAACACGGCAAAAAGGAGCCTCAAATACGAT
ATCGCAATGGTCAGAAACAGATTCGCTATAAATATACGTTTGCTGATGTT
GTCTATATCACTGATGAATTCAGTCGACTAGAGATAACAAGTTATGTTTT
ACCGCTACCCTTGGATAATTACCACGTCCTGGATACTGAGGAGCATCAAT
ACCTTGCTGCAAAGAGGCGAATGACTGAAAACCCCGGCTCTATAACTTCG
CATGCTGTATTTGTTGTCGATTGCAGCGGTTCAATGAAGAACAGTGATGT
TGTTGCACACCGGTGCCGGCTGGATGCTGTTCAGTACGGCATTGCTGTGG
AGTTCATTGCAAAACGTTTGCATAATCCATCATCTGGTGTCACTCAATTA
GATGTGGTGACCATAATCGAAATGAGAGATGAAGCCAAAGTTGTGTTCGA
AAAAGAACCAGTTAGTTGGGTGTTGTACAATAAATTGGTAGACCATGCAA
AGCATAGCAAACCATCTTCACATGGCAATTATTATCCAGCTCTTCAAACC
GCACGTCAGATGTTAAGTGATGGTGACCATCCAAATCTAGCCTTATTACT
TTTCTTTCTCTCTGATGGCCGACCAAGCGACGAGAGCTTCAATATCAGTA
NGttacttttttttctctctGATGGCCGACCAAGCGACGAGAGCTTCAAT
ATCAGTATTTCAAATATCTTGTGTGAAGCTCAAATGATTGGCAAAGTCTT
CAAAAAGCGATTGAATTTCGGCATGGTTGCATATGGTAGGCCTTTGGAAG
ATATGAGTGTGTTGGATCAAATGGCAACATGGATGTCAATGTACGGAGCT
GTTGGCAAATTTCATCGCTCTGATCTCAAGAAGGTGGATTCTCTTTCAAC
CTCCATTGCAACTATGGCAAGTACATTGACGAGCACCCGTACTATGCTGA
CAGCAGCTCGCACAGATCGAATGCAACAGAAAACCTTTAACATAACAGAA
TTCAGCAGGAATGTCATGTCACCTCAGAAGGATTGGGAAGTTAAAACGGT
GACCGCTAACTATTTGACTCGTTACGAACTAGTCAGGTCGCAAACattga
aaaactttatttgGAAAGAGATTCCATTGGTTAGCCCTGAAGCTGTTGGT
ATCTCCTTCTCTAAGAACCCTTTTGGGAAAGGAGCAGAGCGTCTTGTCTA
TCAACTCTGCGAAATCGATAAACGAAAGAGAAAAGTCGGTCAAAGTTTGG
TCATGAAGAATAGCAAATATGAAGGGAATTATGATTTCCGAAAATATCAC
GAACCGTTTTGTAAGACTCAGAAGATTGCTGCCAACACAGCTTTAAGGTT
CAATCAACGTTTAGAAAGAATGCCACAGATCACCAGTAAAGTGCCCCGAG
TGAAGTTTTTGCAATGTTACGTTTACGCGTTTTACGATGGTTATGACGAG
TTGAATATTTTAGCAGAGCGAGAGATCGATCATCATCAATACACCAAATG
GAATGATAACACTGGGGGAGTTCTCGGTCAGCGTCGACAACAAGTCAAAA
CTATTCATGATCAGATCATCGAGgaggaggaagaagaagaagaagatgat
aTTTCAGGTGAAGTTGAACCAACAGCTGATTCTGAAGATGAGGAAAACTT
CTATGGTGTTCGTGACTTAACCCAACAACCAAGAACCGCTGTTCAACAAC
GACATCAAAGAGTACAGATGGTCGATATCCTTGATGAAGAAGTCCCACAG
GCTTTTACTCATTTCTCTTACACGTGGAGTAACAGAGAGAAGATGGTTTG
TGATCTACAAGGTGTTTTGAATAAAACTACGAGAGAATTTGAGTTTACCG
ATCCTGCTATTCATTACGCGTCCAAAAGTGGACGTCGACACGTTTACGGA
CGTACGGACAAAGGGAAAGATGGAATGCGTGAATTCTTCAAAACACATAA
ATGCAACAAACTTTGTGAAGCGTTGGGAATTTCACAAGAACGCAtgtaaa
actttttcaaatagaGAGAAATTCGTAACCATAAAGATTTCCTACCATGC
ACTGTTAAAAGTAACAATAACATTATAATATCatatattttgaatttcga
aaagAACGGATTCATCAAACAGCTCTTCGTAGCCAGGTTTCCGGGATTAT
TCAGGACCTAATGACTGTATTACTCCATCTTCAGccaattttattcaatt
ttctgaTTTGTAACgtttattattatattttcatACTAAATAGTTTACTa
tttgataattatttttcttcccAAAAAGTAAAATACTACAAAGTCCTGTA
TTACCTTGAAGCAAC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00050528	TCONS_00050528	Clytia hemisphaerica	transcript
TCONS_00050529	TCONS_00050529	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00050528-protein	TCONS_00050528-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_179	supercontig	scaffold_179:428551..435615 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14	0.08	0.05	0.03	0.02	0.08	0.59	1.1	1.63	7.04	1.56	1.41	4.15	5.7	7.06	6.55	1.86	2.25	5.54	6.15	1.96	1.89	4.02	4.65	8.22	7.26	14.43	21.52	2.77	2.52

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XLOC_031999 (gene) - C. hemisphaerica