XLOC_033235 (gene) - C. hemisphaerica

Overview
NameXLOC_033235
Unique NameXLOC_033235
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:111360..115732+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033235 ID=XLOC_033235|Name=XLOC_033235|organism=Clytia hemisphaerica|type=gene|length=4373bp|location=Sequence derived from alignment at scaffold_218:111360..115732+ (Clytia hemisphaerica)
gaatgctgGAACTTTTGATTTATCTGATATAGTttcgaaattttgttttg ttttgttaatttgtttcagagaatcaaaaagCACTGTATTAATCTGTGGT TTTAATTTTGTCCAACAATGACAAAGCTATCTAAATCTAAAAGAATGAAG AATCAAACAAAACTGAACAATAAGCAATCAACAATTGTAATTTTGATTAC CAATAAATAAATTCCTGCTTTCTAGAGTCAACAATaaataatcagaaaat tgtTAAAAGTAACTTAATGGTTGAACATGGTATTTTATGATGGCATCAGC GAataggaaaaaccacttcaagATAGTTCTTCTTGGAGAAGGATGTGTTG GAAAAACCAGTTTAGTTTTACGATATTGTCAAGATAAATTTAATGATAAA CATTTGACAACACTACAGGTATGCTTGATTACATAAATTTTTACGAAATG TAATTTCGCCTTTTGTGACTTCGCCTTTTTTGTGATAATAAAACTAAGCG AGCTAACCACTAAAGTAATAATTTAAAGTCTAATCAAATCATTTCCTTAA ATCTTGTTGGCATCAAgcactatcagaaaaatttaatttcttttcagTTT CCTTGAATCTTGTTGGCATCAAGcactatcaaaaaaatttaatttctttt cagTTTCTTAAAAGATTTGATGGGTTAGGTGACAATTGGGAATAaaagat aaattttcttttcttccgTAGGCATCATTTTTAAATCGAAAAATCAATGT TGATAACAAAAGAGTAAATCTCGCAATTTGGGTAAGTTAACTCGTTAGCC AACATTTTCTTCCGTAGATAAAGTTCATtctttgtattcatcattgcACA GAATTTCCTTTGAGCGTACATAGATTACTTCATACTTTGCGTTCAGGTGA TGCCATGAATTTCTGGTCTTCTGGTCTTCTGGTCTTCTGGTCTGCAAGAG CTAGTCTTTGTTTGCGTACATTGTTTGAGATGAGCTGGAATTTCATCTTA TGAGCTTACGTTGGATATTCAAGCATTTGGTGGAACCTAAAACACAACTT TTAGTGTCTTTGTATACctataataacaataataataataataataataa taactaaTATTTTAAGTGGCTGTCCATGGAATAACGACTAAGCTTTTAGG CAGCTCAGCCATTGTCTTCCCCAGGGGCACCTGTAATAAATAAGTATGAA TTCATTCGCTTTTGAAATAAACCTCCCAACCAAAGCTTTAAGCAAAaggt tttattgttttattttacttATAGGACACAGCAGGGCAAGAAAGGTTTCA TGCACTTGGTCCAATATATTACAGAGACAGGTATTTTCTTATCATTACTT GTTAGAAAATACACATTTTGTTTGtcaattcttcattttttcttattGAA GAATTATTCCtctttttgcatattttttgcTTTCACTCgatttcacgttc ttttttcaGCCATGGGGCAATTTTAGTTTTCGATATAACAGATGAAGATT CTTTCCAAAAGGTAAGCAGAAGCATTTCTTAAAAACCCATTAAACTGATT GACAATCCTGAATTCTCTTGTTTTAACTACGCACGCCACAATTAAGAGTA TTTCAATACCTTTGATGTCAAGTCTAAATATTGATTTTGCTTGATGTTAG TGGTACTAGCAGTACAAGTTTTATAAATTTAGCATTTTGATTCTCagaat attattttgatgcAACAAAAGAATGCCGTGTACAAATTGCTGTAATGTAA AAATACTGTTTTTTCCTACAGGTCAAAAATTGGGTCAAAGAGCTGAAGAA AATGCTTGGTGATGATATATGCCTTTGTATAGCAGGTAATGACAAAAGTG CCTATtggctttaaccctattcatactaggcttttaggggcagTTCAGAA AGAGGGGCGTTTTCCTgaaccaccccttaacttttgatctagttggtgTT TTTGGTTGagatttggcacacaagatccttgtcatttgagataacttttg acaaaaatattttttgatgacgtcactcttCATTCCAAAGTGAGCATAAA CCCAAAATTTTCTTTGCTCTTATAAGTaactattgtattctaacaaaagc tttccTGTGCTCAAAATGCTTACTtcatcctaaatattcaatgaaTTATG GCTTGAacgacataaaaaataaatttgtactgaaaatgtcaatttttatg acaccttactgtcaccatgctcaaaaatgtcaaaaattatttcattgtaa aagctaaataaaagttaggaatttacagaaaaatttcatgtcaacgTTTT TAGATTGGTCAAAATATAGTTTTAACATGAAATTTCTTTTGGGTGCTTCA TTTACCTTTGTCAATCACCTCCAAAATTGTTCTCACTTTCAGGcaataaa attgatttggaGAAAGATAGGAACGTTCAAAACAGTGATGCTGAAGAGTA AGAAAACTATTCTTTTGGATTCCATTATTTGTCTTTCTATTGGCTGGTTG GCTTTgaatcatatttttcaaaaaggaacTTTGAAATTAATCTCATTCAG GTATTCTCGCATTCCTTACTGTACTCTTGCCCGTCATTAAATTTACGTTC GACTTTCCAATGCTAAATTGGTACACTATTTCGTTTTCGTTAGATACGCA CGATCGGTCGGCGCAAAACTATACCATACATCAGCCAAATTAAACAAGGG GATTGATGAACTTTTCCTCGATTTATCAAAAAGTAtgtattgttttgaaa atactAATTTTGTGGTGTAATTAGAACTGTAAGAACTTTCCGATAATTAG AGACTTAGGGCCCGTACAATCTTTTATGCGACACAACCAAACCTGGTCCA TatcaaattatgaaatatttaaagAGTTTCGTGTAGAGGGTTTTTTTTGC TAAtgccttgaaaaaatttttggacccGAAAACTGACGTCACATTtgacg aaatttcaaagtaatttttttaaacccAAAACCGCTTATACCAATCGACA GCTCTCAAAAAACGATAAAGAGGACTTTTAAGTGGATATTGATATCGAGT CGATTTCTCGAGAAAATTAACGTAAAAATTCCGTTTTGATGTCATTTCTG GTCGATTTACTCGAGTCGCGTCGGGAAATCAACTACTGTATGTCCACTTA AAAGTCCTCTATGTCGTTTTGATAGCTTTCGATTGATATAAGTggttttt gaaatttcgtcaaattttAGGGGTCAAGGGGTTTTGCTTGTGACGTTAGT TTTTGGGTCCTAAAAGATTTTCCTAggccttataaaaaaaaaaccctCGC GAAAAACTCTTTGAATACTTCTAACGACTAACTTGTTTTTCCTTTACCTT CTTGACTTTGCAAAAGGCAAAACACCAGGGCTCATATTTCGTCAAACTGA CCCAAGCTGAAATAATTCAACTCTGAATCTTATGTTCGAAGTTTTTACAA CAAATTCTTCCTCGTTTTTCCAGGGATGTTAGCGAAACAAGAGGAGGACG AAGCACAAATGGCGTCTAATCCCAACTCATCGAAATCAAGGGATGCTTCA CAACGTAAGCGAAATGTTGTCATCGTTGATGAAGATGAGGCGAACAAACC TGCCAAATCAGGGTGCTGTTGATCTTCACTGGTACATAAGCCGGCGGTTG TGTGGTATTGTGGTTGTCTTAGGGAGAACAATTGCCCAAATCCTCGGTGT CGCCGTATCCAGCCCTCACACACTCTACATTCTTCGAACATATTGGGTTT TGATCTTCTGGTCTTTGCTGGGTgacttattgatatttttgtcgTTCGAT ATTGTGGATATATTTACACTCCGGTAGAAATGGATTGGATCATGTAAATT GACTGAAGATTGACGACTTCTTGACATTTCAAATGacattgtttgaaaat ttttgcaaattcaatttttaacttatttttgattttggttttggtttttg ttatatattcagtttctttttctttatgtTTGTAggtatttttttgaatt ctgtTCTGGTTTCTCTTGATATTAAGAATGCTCAGTACAGACATTATTAT TCCACACATACACAATATGAAATATCTCCCAACCTATCCAAAGAAGGTGA AAGGAAGGATATATCCATAGACTTTTACACTTGTCTGTTCAAATCTTCGT GCAATCTTACAATTTTTGTATACCAATTTGTAGCTGTTTCAATTGTTTAG TTGATTTTGTTTAAATTATGaatgtcaaaacaaaaatgttttttttgtaa atcaaAACTATTATTTTTAATGATCATACGATTGCCAACagtatcaaatt ttttctttattgctcGCGAACCTTCTCTAAAGTTTCTTAATAATACTGAA GGATTCcttgtttttccattttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052554TCONS_00052554Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052554-proteinTCONS_00052554-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:111360..115732 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RAB21ras-related protein Rab-21 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
171.92 169.53 188.3 193.11 26.29 19.73 61.8 66.28 79.91 74.61 67.77 55.24 53.8 52.57 50.85 54.87 61.71 58 41.8 58.63 57.91 56.24 79.63 75.73 53.33 61.58 90.81 71.92 88.49 87.07