XLOC_033378 (gene) - C. hemisphaerica

Overview
NameXLOC_033378
Unique NameXLOC_033378
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_220:362432..370036+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033378 ID=XLOC_033378|Name=XLOC_033378|organism=Clytia hemisphaerica|type=gene|length=7605bp|location=Sequence derived from alignment at scaffold_220:362432..370036+ (Clytia hemisphaerica)
ttttagaaaaaaatacaaactaaagcaaaaaaaagttataaaaaatcaac aatcaataAGGAAACAAAATGACAACGGCCGCTCGACCAACCTTTGATAC GGCCCGTGGTGGTCAACAACGAGGTGAAGGGAATCTAGCATCACTTACTA AGCAATATTCTGCCAGAGATTTACCTTCgcatacaaaaatcaaaactagG TGAGAATGTTACACGTTTATTGTATAAGAGCATGTTCTCAACGTAGTCgg aagaaatgttcttaaaatgttcttattttcactgtTTTGTCAGTATTTTT GTGCGATTTCCTGGTTTTCTTCAGTCGATATTTGTGTATTAttataaatt gtaaattttttctcatGTCTCATTCCGacccttttgatttttctctttta tatACATGTTCTTATTAGAACGTCTTAATTTGTGTCGAGCCTGAAAGTCc taatttttgacaaatttcagtTTAAAATATCCATTTTCATTCGAATAATA GTGAACGACTTTACGTGAAAATATTTCCTGTCCACTATTAAAATTATAAG TGCTATATCTTTGTGGACAGACTACATCCCAGTATTCGACTTTCTTTTCC ATATTTATCACAGACAAATCGGACAAGATACAGCTGAAGAGATCCGTAGC CGTGATTTTAAACACGATTTGATGGAACGTGAACGTTCGTCACGTGAGAA AAGCAAGAAAGGTTCATCCAATTCTAGTGATTATTCATCATCATCGAAAC GACAACGATTGGATTACGATCGGCATTCTTCGCATCACCACAGTAGCGCG GCCATTGATGCCGATGATCCTGTTGATGATGAGGATGAGGATGACTCTGA TGACGACAGGTTAGTTTTTCACATCCCGGACAGGGACTCTAAACCTTTAA GCTTGGCCCTCACTTGTTGAAAAAATCGCGTCTAATCACTAGACGTCTGC GTCTACCATTAGACGCGCGTGACTAAGTGTTTGGAACCTCTAGTGAGTAC ACTCGTTAGACGCGGGCGTCTAATGTTAGACGTGGGCGTTTAGTGTTAGA CGCCTGGACTTTGACAAAATTTGTTAGACGCGTggaacaaaaaattttgt tcTGCGCGTCTAACGTTCAAAGGCACCGCAATGTAAACATAATTAAATGT CCCCAAAGTTGTAAATTCTCGTAATCTTTTCGTAtctttttcgtattttt ttctCTCTGTTTCTGTTTTTACAAAGTGTTTTTAGCTGATCAGTACTGCT GCTAATAAAATGCCAAGAGCAAATAGGATCTTACTCTTTGATAGAAGAAG AAGAGCTTTGTGAAGCCCACAGGCAGTACCCCGTCATATATGATAAGACA AAAGTCGATCATAagaataatgtcattactgttATTGTTGGCTTTCTCCA GTGGCCAGAAACCTTAATGTTACAGAGAGACGTTCTCTAGCTGATATTGG CTGACGCATTCGAGTGGTTTTCTTGCTGATACGATGTTGAATTAGTGAGA GAAGATGCTCAACGCGAGATCGAAAAAACATTCCACTGTCTTTTAGCAAT GTTTGAAACAGAGTATTAAACGTTCCATGGATTGGTCTTTCTTGAAAAAT ATCTCGTACCCAAAACCGCCTGCGACGCGCCTTTCTCCTATTTTGtcttt ggcccagcgctagcgatagggcctttcatttgcaactttccgtccgtgtc cttccgctgtctgtccgtccgttttggtagaaacggcgcttcaacaccag taccacacttttaaattttaccgtctggagagggaaaagcttgctaaagt tggatactggctataaaagatatattttctgattctgcgctccttcaaaa caattttcaaaacaaaacaaaatggcggtcgaagcgaggaggttgattca tattttcttgaacattttctttgctttagtggcNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNGATCTATTTCAAcgggtcatacatttgctgttttgca caggctcgttttcaacacgttacttttcgctgggccttcacgcccaacgg gcttcttgttttcgTAACAAAAGTATCAGGAGCAAATCTTCACAATTATC AAAGTAGCTTTCATCATCACTGCTATCCATCTTCTTTCCATCACATAAGC TGAAAACAAGCTCAAACTCATAACTTCATTTATTCACATTTCCCATATTT TAATcctttaattcaaaaaagttcatCGTAGTGAGGACAACAAAGACATA ATTTCTAGACGCACGCGCCTAAGGACTCGACGCGCGCGTCTAATGTTAGA CGCAGGCGTCTAGTAATTAGACGCGATTTTTTCAACAAGTGAGGACCAAG CTTTAAAGTTAATGTTAGGGTAAAAGGGgcaattccagaaaaaaatttac gcCTTATGTTGAGGACTTTTTTTGTGAAAGGTGATcctcctggatttttt ttttcaattttggatttttgactCCTTAACTTTTTGACTCCTTGacgttt tactgaccaccctggatttttgaccttATTTTCCTGACCACACTGGATTT TCCACCTTTTCCACCTCAATTCGATTTTTACGCTCGATAAACCAGACCCc tggggggtactacccttgtcgaccgacgggggtgctccgctgaggttcaa aaaatggaccctacgtgggactcgaaatttgcgaaaaaagtgacccagaa tgggactgaaattccaaaatgttctactttttccccaaattttccagaaa taggcaccttacgagggactgatttttctattttggtgtttttgcgaccc tacctgggactcgaaatttgcgaaaaaagtgacccagaatgggactgaaa ttccaaaatgttctactttttccccaaattttccagaaataggCACCTTA CGAGGGACtgctttttctattttggtgtttttgcgaccctccctgggact cgtggaggttaaaaaaggttcCCTggccagcggagcatccccgtaaccca ttttgccctagtgcccccccccccctccccccgggacCAGACCACTTACC TCCTCAACAAAGGGAATACGTAGACTATTTCTTGAATAGCCCAATACACC TATCCACCCATATAAATTGGGTTTTAAAATCCATTGTGAAGAAAAAGAAG CTTGACTAAGGAGAAGCAATAGCCAAAAAGTTGAGAatcgaaaatatttt agaaactGGGTTTTTACAGTAAATTATGActatcaaatttcaaattctaa AGAATACGTTATAAAACTCGCGATATGCCGTGACAGAGGCCCTGAAAACA TCCAGAAAAACACCTGACTTTCTTTAGGAACCTTCCATAGAGGAGGGATG GCTTGATTTTACCAAAGTATTGGCACATGACTTCAAATCCTCttctttgt catttttttggATAGTGACGATGATGACGATACCGCAGAATTGTTGGCAG AATTGCAACGCATCAAGCGAGATCGTGCTGAAGAAATGCTCAAACAAGTA AGTTAAAGGACATCATTTATCGTAACTcttaccatttgcttacactgTAT TTTTTAAACAGAAGATAGAACCTCGTTTTGAATTCAACCGATCGTTGGGA TGGGCTTTAGTTCAGGCCATAAACAatcatttcaaagatttttcacttca ttttttcAGGAGCAAGAAAAACGAACAGAAGATGAACGCATTCGAACGGA GAATCTGATATCGGGCAACCCTCTACTGAACCAAAACCAACAACAAGAAG GAGACTTCAAAGTCACCAGAAGGTAAGAGGAACCTTCACATTTTAAGGGG TTTCTCaggggttttgctttgtttttggtaggctGGCGATAGTCTAACTC TAGTTTCTAAGCCGACGAATTCTTAGCAATCACAGTGTATTGATTGGcgt aaatatgtacttgaggcggcGAACCGAACTTTTTGAATAacgaattgtaa ttttttttgtgacTTGTACCGGCAAAATTCGCCGTTCGCCGGGCCTAAAT AAGACCCCTTGCTTCTCATAGAGAGGTTGCGTAACTTTAACAAAATATGA AACACTTTATATTATATCCAGGTGTTCTTTATCGGACGGATTCGATTCGG GACTGATGTGATgtgatgtgttttttttcttctcaggTGGGACGATGACG TAGTCTTCAAAAATTGTGCGAAAGATGACGACAAACCAAAGGTTTGAacc aataaattatttttttatgtttgttaCATTTTGTTTTTTCCGGCCCCTTC ATCCACTCCGTAGGTTTTTTCCAATGCGCAAATTTCGTGTTTGGTTACGC ACGTATGTTATTGTACAATTTGAGAACCGCAAATTCTGTTTAGCTCAATT TCACGAAAAAAGACTTTTGCACCAACTATACTAGCCAAACCAACGGTGAT ACGTTCGTTGTCTTCGAACAAAAGACTCTGACACAATTCTCTCTTGTGAA TTTTCCTATCCTAGTGAGAAAGTGACCATTAAGTGACAATTAACAGCCTC AAGCGAATTtcaattttcgacaaaaaagaGTATCCTGATCAACGGCACTT GCTTAACCCCTTCTCTTTCTTCCTGGGTTTcaaacattgagtttaaagtc cgaagggctagagagaatctttaacctttttgAAGCAAGAACAAGATTTG TCATGTTTTTGACATAgcgctttttttttctttttttttcacgcagcata ttttTATAAAGTCTGGCGATGGATTTCAATCCGGAGtttgtgaaaaccac gcggatCAAGCGTTTCAgatgggaaataaatggcttcatttcctatcaaa gagtttcaactctagccccttcggggttttaaactcaatgttGTTGACGC CTTCGTGTTATGTTATATATGTCGTTTCTCTGTTTTTTCTCTTAGAATTC TGGATTCATCAACGACACGATTCGCTCGGAGTTTCACAAAAAGTTCATGG ACAAATACATCAAATAGTACATATTATGAAAACGACCACAACAATAGTTA CTCTTTCCAGCCGGGAAAGTCCCAAAATTTGTTCGAAGTTAAGAAAGATA TGGATCAAATTTTGAGTTTGAGGGTTTATATCGTACAGAGAGACTGGAGA ACAGTTCAATTCAGCTCTTGGGTTGGGTGAATGATTATGGAACACAGGAT AACGAACGAACGGGTATAATACCGGAGTTGCCTAAAGACCCATCTAGATC TGAAAGGGACTACATTGTGTTTTAAtagagactgttcatctaattGCCTT GGAATGGAACAGGCTATATGGTTTATTTTGTGCTTAGCGACACGGTAAAT TCATCATTCGTGTACAAAAAGATATTACTGTATATCAAGAAAATAGAAAC ATTTCTTTTACTACACTACATCATGCACAAGCACTTCTCTCACCTTGCTT CAATGCGTTCTTTTTACAagaaatatgtttttaaatttttacgtCGAAAA ACCGTAAGtttcatcttttgttttattcatTTGTCCCTGGTAGGGTTAGA AAGCCCACCTTTTAACCTACTTGATTATGATTGTCTCACCTGTATCATTT TGTTGAGAACTTTGATATTGTGAATTTTGCTGTATGTTTTTCTGTTGTTA ACGGGAATGGGCTCTtcaagagaaaaaattacatttcttttaGGTGGTTC TAATGCCATTTTTCAGGAGTTGCCCCAGACGTGAGAATTCTGTTTCCCCG GACATTCGGACAGGACCCGATTCGGGTTTAAACCAATTGGCCTCTTGGCT GAGAAGAGAACGAGAATAACGGGTGCCCAAGCCATTTTGGCTGGAGTCTT TAAAGACGGCCGTAGTGTCCATCACACTGACCGATACTAAATGATAACAA TACACTACTGTGGATCTTACAATGAAAGGACTGGGGTGAGTTTGCGGAAG TTTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052815TCONS_00052815Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052815-proteinTCONS_00052815-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:362432..370036 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CWC15spliceosome-associated protein CWC15 homolog Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
84.86 83.07 84 83.44 55.57 41.02 57.94 65.07 54.48 42.16 39.52 36.04 33.28 35.59 25.71 29.95 55.31 49.16 22.55 28.8 35.25 33.05 46.25 44.57 40.13 40.89 24.06 20.63 27.17 27.8