XLOC_034192 (gene) - C. hemisphaerica

Overview
NameXLOC_034192
Unique NameXLOC_034192
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:448781..457418+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034192 ID=XLOC_034192|Name=XLOC_034192|organism=Clytia hemisphaerica|type=gene|length=8638bp|location=Sequence derived from alignment at scaffold_242:448781..457418+ (Clytia hemisphaerica)
GTAGAAGTTGCATGTTTGACGGCGAGCCTTGTGACCCTGGTGATTTCTTA GAAGTGGTATCTGCACATTACGGTCTTTGTTATCAATACAACTCAATCTA TCTTGACAAAGAACCGTTTAAAGTATCCAGAGGTGGAGAAGGTATTATAG GTTCAAAGAGGCCCCCCATCGGTAAGTCCGATCATGATATCACGCAactt tttgtcttcaatcatgATCGTGAAAATTTAgataatcacgcatccctttg aatCACGACTCAAAAAAATCGAATCAAAATTCCAAATCTAGCAATCACGC TAGAAAAAAGTACCTATCAtgtcatcacgaaaaccgcttgggggACTCAC CAAAATCTGGTCACGATGAATGTGTACTCTTCTTTTCCGTGGAAACCATT CTCAAGGAAATGAGTTTAACATGGTTTCCATACGAAAGCAAAAGAGATTG GATTCCTTCTTTTGAAGAGATCCTAAAAAGTTTTGGTTTACTGCTAAAGA GAAATATCGCAAATTCAGTCTGATTTACTTGAGAAATTAGTAGAAAGTCG TTTACtatattttgacgtttttatccagatttaaagtctattcaagAAAA GTGTGCTCTCTTTTTCTTGGGAAActcttcacaaaaattttttttgattc ctATGAGAGATTGGTTTCCAAATGAAAGTCATACTGAACCATTGAGTTTA GCAGTAGAaacttttggatgggaaatgaagctactTAATTTCTCATACAA AAAGCccacgcgtggtttttacacaaacgctggattgaaagtaaaatctc tcgctaaattccaaaaaatgcagtcctcaaaaacaaggGAACCCCTAGAT ACattccgtcgtcatgattgcggcgttttctaggcgcgttctaggcgcgt tctagatgggaaataaatggcttcactttttcttgcctgggaaaggtaga gattctactctaacccttcgggctttaaactcaacgTAGGAACAGACTTT CACTAGATCGAGTTTAAGTATTTTCATCAAgatcttgaaaatatttttga atgggcgtttttaatctttttaatttcAGAGATTCAGCTGAAACTAAAAT GTCACCAAAGAAATCAAAACGATTTAGGCCAAACTTTGTTTTCCCAAACT TGTCGAAGCTAAATTTTTCACGTTCATTGTTAGTTGCTTTTTGATATCTA AACCAACAAATGTTTACCATTTTTTATTCAGGTGCTGGACTTCGTTTGTA CATGGCTATTCCAGAGGATGAATTTCTGGTCAGTCGCGTTCCTTTCAATG GCCTACAAATCTTTGTACATCCTTATGGGGAACCTTTCGAATCTGCTATC GCCAAAAGGGTTGCTATTAGCCCTGGAACAATGCAATTTATCCATGTTGA ATACCGAAAGGTaaactttgaaaagtttgaaagtttgaaaaatctctacG ATTAACCTATGAACTTTATGTTTTAATATTATCTTTTTGGTTTATATTCA GTAATATATCCTACGCTCTAGTCAAACTTCTTAACAATACATATGTTCAA AGGTTCTTGGTATAGCCTGGTATAaggtattttcattttctttagtcGGA ACTATTGGAAGACCCTTATCCATCAAAGTGTTCTACAAAGGAGTACGATC TAGTCAAGAAATTTGTTCCTTACTCACAATCAATGTGTTCTATGGATTGT TTGATGAAAGAAATGCTCCAAGATTGTGGTTGTATCCCTGCAGAATTCGC ACATCATtatggtaaaaaattattttcaaccaTCACAATATGCTAGTTCC ATTAAAAACCATaccttttcaaatcaaaaaaaagttattgaaatGTGTCG atacccctggaaaatggcgaaatttgctaaaatacccttggaaaaaatct tttcatacTTAAAAAGAGGATGGACGAACTGAAATCAATCTTTTACCCTG TGGACATTTTGGAATACATTTTActcccttggaaaaatgaaaaaggccCC CCCAGGAAATTTTTTCTCGGAttattaccctctggaaatgttcgtccacA CCATGAACATATAAACGACTGGACATccatctcctttgtctttttgtaga aagggctgctagcttcgttgccgcctcgttaaaagcataaaatgaaacaa tagattttgatgatataccacttaggaataccttgctaacaacgtcaaaa ctttgacaaaagtctctgttgttctactcttctcaagtcttttatctata tcataaaaaagataacagaggcaaaatcatcgtcagcttgtcaaaactcc gactaatttATCTAATTTTTGACttaaagtgtctaataattttagagagt gtcacattctaatttcgatattcttattacacaggctctcaactttggca agctatttttttcaagtcataaaaaaaattattggagtgacaaaagggat tcaaaagtatacacgcagttgaaattctgcatttcaaagttgaaaatatt gataaaatatattacaaacttgtaaaaaaattcgaaaataatttctttgt acattaagagtaatgttcaagctctatcaatccttttacctaaataattc gaagaaataaaattatgacggaatattgtcggatttttcataccaatttt gaaatacaggcggcaacgaagctcgcttcaaagagacaacaaaagataga tgtccagttgtttatatgttcatgtccacacctagtctagcaagctagac gactaattcagacatagtagaaataaagcaaaaagtaatagagggaccaa ttttagtttatacaaactaaatcccgtaacaataatcgtattatcatata actcctatactactgtattataCGCATTATAAACTACTCCAGTCTAGTCC ACACCCCCCTGTATCGATATAAAATGGAATCGCCCAATATgctagttttt tttttaggtcTTTTAGACAGTTTATAAAAAAGTCATTGTTGGACTTAAGG ATTTTTATCTATAATTGATTTACTTACTCTTTAGGGTAACTCATAGAGTA ATTTTAGCGAATTAGTGAATTTAAACTCTTGACTTTATGAAATCATCATC CAAATCTTTACTCTATCGATTTTTATAGATGGCGGAAGTAAACCATGTCG TTTTCGTCAAATTGAATGTATTGGACCCAAGCTTGGTATGTATATAATGA ActcatttgaaaacaaaacttttgaTTTCATTGTTAGATAAATCTCCTTT TTGTGAAGAATAGTAAACTATGGCTGTGAAAATACTGATTTAAAGGCTCT TTTTGTGAAGAAGTAAGCATTTtgataggctacgtcatatttttcttcgt ttcgagcgtaaaactcctactcttcgggatatgcgcactgctcttgtttt gaatgttGAATTTCTCCGGATatatcgcatgcgcactgaggttttaatga aacaatagagagtttcgagaCCTAAGCCAATCATAACTGTGTTTTAAACA CTCTTTTATTTCAAATCTCTATTGAatgattgataaacttcttttgttaa aaacttctattatgtttaaacctattgaTAGGcgaattcccggtgggggt cactagtggccgcccatagcagtgcctatagaccaagagtaaggcctaaa agcctaaTTTGCGAAGTTTTGGTGTTTTCGTTTCAGCGAATGCTGATAAC TTGGTGCATAGATGCAGGCGTGATTGTCCAAAAGAATGTACCAGCATCCA GTATGGAATATCTGTTGGCCAGACCAACAtggggaattcaaaaatcatta GTAAACTTTCTAAAAAGTATAATTGGACCCACGATGAAGCTCGTCACTTT ATGAGGTACATCTCAGTAGCGTAGGCAAGGggcacaaaatttgtgtagga gagcagatttttatgccacagtaatatcttttttatattataaatagata attgcagtgtcataaaaatctgctctcctacacaaattttgcgccccttc TGCCCACGCTGCTGCATCTTCAAACTATGACGACTCACACATAATCTACG GCGCGAGTTTGTTTACAACCAATGGGGACTAATGTTTTTGTTTCTGTAAT TTCTAATCGATTCTATGTCGTAATCTCTATNGGGACTAATGTTTTTGTTT CTGTAATTTCTAATCGATTCTATGTCGTGATTTACAGCAATCTCTATAGC TATATAGAGGCTATAGCGAATGGCAATGTAATTTAGCTCCTTTTTaccta aaatcgtaaaaaaaattataggctgaatttcaaaaataaaaaaagagtta atttttgcgagaaactaatttttgggaattttgtcaaaattgaatCAATg acgatagaccttttcataaattacgtcacgaacatcacttgcctcgtatt caaacaattatcatatggtgattatgtctcttgagacattaacattaaat gatttttttatgaataggaagtagtttaaATGAAATCCGCTTGGAATTAA TCACCAtgggtgtttttccactgacAGATTAGAGAAGGATAATCCGAAGT CGTTAACTCGACAACAAAAGAATCAATTAAATAAATCCCGATTATGTTGG AAACacaggtcgtgttcagacctgaaagtttaagtttaaggcttAAGTAA TACtaagttgatatgggaattaagaaatgcaacgacttaattgctatttc atcttttagatagatTACATAAGAGAGGAAAAAGGAATCCCCTTCGTTTT TAATGCGGAGTATGGGTCCATCGATCCatgatattctcattaaaagccca ttaactgcctaaattgctagagacgctccgagcgtctctaagtcataaat ttcacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCATTATCGTGTTGCATgct tcttttcatttctttttacgAACTATAGAATTAACCTTTTCACAGTTTAA CAACTATTTCATTAAGTATATTAGCTTGATTTTgtcagtggaaaaacacc cCATGGCAatcatttcaaaacgaggctaatgatgttcgtaacgtaattta tgaaaagcggtttattcaacataaaaatatattttcccaCTTGGTATAAG GTTTTGATGTACTTTCTGTGGTATTTTATTACGCATAGAGGATTTTTTAC ATTTCTGTTTTAGAGAGAATATCTTTGGTATCGATGTTTCATACACAGAT GTTGTTTATATGATGGAATCATTATCTCCTGCTCAAAATTGGATATCGCT TCTCAGTAAGATTGTAATTCTGGCTGAAACTTCCGTTTTATAATTTATGA TGACGGCTATTGGAGGAGTTGACAAGGTTATCAAGGTCTCTGATGAGAAT CCAACAGATTTGCAATACCctatcagttacatcaatatgccttcttacct gtctttaaaaatataaataaaagtaatcacggaaaaggacgcgaaaaaaa aagacataagtgtgagaacagagtNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNaagacataagtgtgagaacagagtaatcaaact cgttagaaaaagtaccattagaagtcataaaaaatcaacctgaataaatg caatcgaaattccagagaccttcataattccccaaacaacattacattac tatgtcaaactccTATCACATAAATTTTACAATTACGTCAAAGTAGACTA CGCTCGCCACCGAAGAGGTTTATTTggaaagggtaattatattttattgt tcgcttcttttttaaagatttgccaagttggaaaagtatgaatttctttg tacatattttacctaccccaaatatttgggacgctgagttttaaacgNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacgataaatg tatcaaggtctgttttatttaccccctggtgacttaacaaaagagactta actcgatgttacaatccaattattgaaagtttgtatcggcctttttataa tgagcgagacatacgttctctgattacgcaattttcatatcaacatttcc gaggcattttgatgtaactgcctattctcaaataaaaacattgcctatcc atttttattttttaaaccttCCAAAAACATACTCCCTGTTTCAACATAAT GCTCGGACTTgatttctcatttttaattggtaagtaagtaagtctgcgac cgcagtcggaggcgacacgaaggctcctctttcgatagctatctacccaa aggtaggggagggtgccactctttctccctggatttcttcacttaccctt gatccttttctTAATTGTTGAGCAACAAGCAGAGAGATCAAGTAcaattt tgagaatctttggtatgaccagGTTGGGGGtggaacccacaaccttgcaa aCCGTAGCGGGATGCACTACCACTGCACTACAgccagatttaaaaaaaag gtgGGGGTTATAATCAAGGTcacaatatttgagaaaaaagggaaattccc gaggaagttttgaaaccacaatcgatttgtaagtgctctaaagtaggttg gaagggtagagttttaactctgaattTTAACGCCAGCCTTAAAACTTAGG ATCTGaggttcaaaaatagtccaataaggctcagaatgtAACCTGGAAGT CTGCcgacccctcccaaattgaaatattcaattaCATTAAAGAgatcaaa atcgactttctcgctggaactttaaatcttgaaaaacgttaaaataaccg gaattctcaatatatttcaacaatgATTGTAGGTTGATAAGTGATTTAAG GTGGGGGGTGAccttttttcaggtgggggttggaggggtgctGCCCACTA TGGACGTGAACTAAACATAGACACCGTTTTGATGTATTTTCTTTCCTTAT AGATGCTATTGGAGGTGGTTTGGGTCTTTGCATGGGTTGCAGTCTCATTA CTTTCATTGAGTTCCTGGTGTTTGGCATCCAGTCTATATATTTGTATGTC ACCAGTAAATGTAAGGGCAATTGTCAATCTCAAGTTGAGAATGATAATTC GGAAAAAGACATGAAAAATAAACTATGAAAAGTAATTATCATTTCAATGT TCAAGATGAAAGGTTAGATGATTATTTTTAAACGATAAATATGTAATTTG AAAATACTGATAAAACCTCAACGCTATTGAAAAGGTAAATAGCTAAGGGA TAAAATGTGTATGTGAGGGTGAAAGTGTTAGAATAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054207TCONS_00054207Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054207-proteinTCONS_00054207-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:448781..457418 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19 0.07 0.13 0.08 0.62 0.12 0.34 0.28 0.32 0.16 0.15 0.05 0.35 0.05 0 0.14 0.06 0.15 1.01 1.02 0.37 0.32 0.52 0.75 0.94 1.9 0.1 0.17 0 0.13