XLOC_034210 (gene) - C. hemisphaerica

Overview
NameXLOC_034210
Unique NameXLOC_034210
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:811196..823066+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034210 ID=XLOC_034210|Name=XLOC_034210|organism=Clytia hemisphaerica|type=gene|length=11871bp|location=Sequence derived from alignment at scaffold_242:811196..823066+ (Clytia hemisphaerica)
CAGACGGCTGTCACTTTCAACAAATTGTATAGAAAAAATTGCCAATCTCA ATGGTCTCAGTAAGTGTTTGCTAATTTTATTGAGTATACGTTTTCCCTTT GTCACCCCAGTCATATTTTATAGTTCGGACCTCCCCTGACACCTTccgaa aaaattttcatgaaaaatatatttcagattattttcaagcactgttatga aatttggccttcatgaaaggaagttctcTGTTAGActagtctgagtcaaa aagaagaaagaagttttttattattattcgCTTTCAAAAGatattataaa ttcatatatttgttagctatttttaTCCAAAATCCTTGAGGGATAGGCAT TTTTCATAGGTTGGTGAGATGCCAAGAGAGGGGGTCATTCGCACTATGTA TTCGTGATAATACGTTGACATTATCGTTCTGATAGCTTAAGATGCAATCC AAAagtcaaatttcttttaataGGAAAgttatctttttgaaatttttatc aatcCAGATTAATCATGTacgattttttctttcttatttagaaaatttaa agattttatcaCTTGGGAGGAATAACATCAAAAATTTAAACGGTCTGGTG AGTATTCAATTAATTGATTTGGGTTTTCCTGGAAACACTGCATACCCTTA TTTAAAGAGGCCCATTTCTGTTCCAGGgggggggtaaggtttgaaaaatg ctggaattccatagggatTTAAACCTAAAAGTAACTGGAATTCCAGAAGT TCTAAGTCAGAAAAAAGTCGGACCTTCTCAGCAGAAGGTATACATATttt tctacaatcagtgccaaaatacttggcacgAAAGGGAAATTCTCCACGAA ATTTTaaaaccacaaacaatttggaccgaaattgacattctcgctcgaat ttcaattttcgaaaaatggtaaaatagccaaaattgccaattatgttatg gcactgattgtagaaagGCCCATTGTACCTACCTACCTTAATGAAGGTTT TATTCTAGCCTATCCTTAgttctttttttggaaatcaaggTATACGAATG ATTCACTAGCGTTTGATGAAATTGCCAGTGGGAAGTGTTAATTATATGGA GGATGTTTGATATTTTAAAAGCTGACAATAGACCATTTCAAGGTCATCTC AAGGGTTGAGTTGAGCCAAGTTTAAATCCTGTAATTTTCACAGCTTAATC CATATCTAAATAGAATTTATTTTCTGTTTCAGGAAGCAGTAGCGGACACT CTTCAAGAATTATGGATATCTTATAACAATATTGAAAAACTGAAGGGTAT TGGtgttcttaagaaattacaggTATGAGCATGAATCTGGTAATGTCACC caaatagatgaaaaaatttggaaaaaataaagttttgactttcactttta ttcctggataatttttttattaatgacttcaattttcagaaaacataagt ATCAGGGCTTAATCAAACTGGCTTGGTCAAGAAATTTGACCTAGAGTAAT TATAATCaaacaaatttggcaaaaaactctttgtaGTTTACACTTCATTT GAGATAAAATATGCATAATCTAATACTTGTCTTAGATTTCAGATCATGGC TAATATGTTAAGCTGcattgaaaagcaatttttaccgTCCAgtatgtcat atttttcaaattctgacactttttccgaaagaaaatctaaaatattaaaa aatattcccataaagtttgacttcatgaaAATAAAACTGGCTATGGTCAG GTAATttcattctagatttgaagGACTCATCATAAGCCTTCCAAAAAGCA AAAGTTTGCTATATTTCAGTTagtcaataaaaaattagaaaatgaaacct tgtcggttgcggacataactttttgttaaatttgattcaaaatcagcaat agacattaaatttatttattttttggcttttaaaactttgctgtacttga accaaaacttaatcattgaaatttgttgtCTTGAAAGGTCTTTATAACTA TGATTTCCTGAAAATCGAAGATTTATTTGTAAAAGAANAAATCTAACCAG TCTGTAAGTGAATGTGTAGTAGATTATGTTGTGTGAACACTACACAATGA ATTTAATATGCAAATTAATGCATAATTTATTCTTTATTCAAGCTCGCAGG CTCAGGACcgtcattttcaaagaaacaaaaaaaagttatttttctgttaa aattctcattttggACCTCAACTTGGCATCAGaatatttgttttctattt GTAATAGCCTAAGCACTACttccatataataaaacatcatgCCAGCTTGC AAATACATTTTATCAGCAACATTTTAGATGAAATAGTTATGTCCACAACA TGAAATACATATGATATGAGGTGGAAAGACTGAAATCTTGCCAATGGAaa attatcagacttttttctGGTTGTAGNATGATTTGAGCTTGACATCAACT GCTGTACATCTTCATAATCAGTAAATATCATTTTTCCGTGAAAGTCACTC Aactttttcaatagaaaggcttaaatgtataataatgatgtgttgcggac ataactttttttcttccagGGTAGAACCATAGAACATTATACATCATTTA TTTAATNACCTCAAATGTaataatttgtcaaagaaacctAAAAATGGTGT TTGGGGGCTGAGAAAACTTCATgatttgttgcggacataactaattTTTA GGGAAACTGTTTTGTTTCACTGTCTCCCAACAAGTAGACTTTGAgacttc aaatttgtataaaatgacCCCAAATATGACCCTTGATGTAGAAAAATGAT TCAGCTGAGTAAGGATAActcctttgaaaatttaaaggataaaataatgt GCAGACATAACTCAAAATTGTGAACGGAAATCATACCCTGTTCActtcaa aattgaatatttttcaatgaaggaCAACTGGTATTTTAGTGTTACTTGGT TTGGTTCTCTAATGGATGGGAAGGGTTAGAAATCAAATAACTATAGATAT TAACACTTTCACTTCTCTAGCAAATCAATtgtgtgcggacataactttgt gAACGGAAAAAGTTATGTCTGCAACTTTTTGCATTNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGCATTTATTCTGGgaaaaac ttaatttcaaaaaatctttttgtagattctgtttttcatatttattggct gtaataaaaacaaaaattaagtaTGATCAGAGATGATTGGCCTAGattat caaataatgaacttagacaatttgctaaaaacctcattttccgttcacat tttgatgtaaaaagctgtcctgaaaaaattgtgtactttctaaagtgaaa aaaatgactgtttaagCTTGCTAGTATCAAGACTGATAAAATACATCAGC TGGTATCATTATTGCATGcacctagatttttcactggagccttaaagttg acaagttgacaaaaccgaaaatgggTGACATTAGCAGACTCATGCTCGTA TATTATCTTCTTTGATCTTATTTTTAATCCTTTATTTGATGCGTTTGTTT GTTCGTGATAAGTAGTAAGTCTGCgatcggaggcgacccgaaggctcctc tttcgatagctatctacccgaaggtagtagggtagggcgccactctttct cctaGGATTACTCCACTTACCCTTcatccttctcttaattactgagcata aagcagagaggcatcaagtaccatttcggaaatctttggtatgacccggc tgggggctgaaccgtagccggatgctctaccactgcactacggtcgctcg TGCGTGATAAGATAACACGATAAGAgaatatatttatattttaaggCCAA TTAAGAGGCCGAACTAAAATTTACCtatttttattagaaaacttgtattt tatctatttttctcttcatctgaaagaaatttttcaatctttagtatttc ttcaattttttctttaggTTCTTTATATGTCAAACAACCAAGTCAAAGCA TGGGATGAATTTCAAAAACTCGTTAGTTCTCTTTTGTTTCATTTAAATTT CTAATTATCTGAACTTCCCATTTTAATTTTAGTGTTTCATCCTTTAAAAT ACACCATTTAGAATTTTTATTGGTCTTCGATGATTTTATACTTTGAGATA CGTAAAATAACCCCCCCCCTATTGTCCCTATGTCATTAATAAACCTCATC TAAATCACCATCTGGTTTATATTTTTAGGGTGAACTGCCTAATTTGGCTG ATTTGCTATTTGTTGGTGAGTTctattactttaatgggataaattttcgc ggggattaaatttcgtggttgggctcatccgcgaaattttaagaattcgc gggaacttaattttgcaacatgacacccaaatccgccaaatttgcgaaat ttaattcccgcgaaaatttatctcattttaaagtaattttttgaTCCTTT AAGACCGTGTGCTAAATTACTTTTCAACTCTCATTTTTGCAAGTTTACGT ATCTACCCTTTTGAGGACGGTTGAGTAACTGAAGCGTAACAACCgtagtt ttgacccgcaaaatcaaggacggtaaaagtgctgatttaccatcgtcctc agtcaatcaggatctagCAAAAACTAGAAAAATAACTATCTTCATCGTAT AAAACACCAAAttatgggacaagctggagtttttacaagatagaGAAATG CCGAATTTTGCAGAACAGCATCAATTCATCCTTTCTTACTACAATGTTTA AAATTACAAAGTTACAATCATTGAAATACTGAATATAtcgaaattctatc aaaaaaaaattacaccatactcaagtcccgaagtcccaaattgaaataca tcaaatttctgagaaaacaaaattacaccaaccaaaagtcccgaggtccc gaagtcccgaattgaagtaTGTCAAAATTCTATCATAAAAAGAtttacac caaccaaaagtcccgaagtcccgaattgcaaaatatcgaaaatctattaa aaaaaaattacaccatacTCAAGTCCCAAGGTCTCGAAGTCccgaatttc aataaatcaaatttctgagaaaaaaaattacaccaaccaaaagtcccgag gtcccgaagtcccgaattgacgtatgtcaaaattctatcataaaaaaatt tacaccaaccaaaagtcccgaggtcccgaagtcccgaatttcaataaatc aaatttctgagaaaaaatatCACACTAACCAAAAGTCCcaaggtcccgaa gtcccgaattgaagtacatcaactttctgaaaaaaatattacaccaaccc aaagtcccgaggtcccgaagtcccgaattgcaaaatatcaaacatctatt taaaaaaaaatcacaccatacctaagtcccgaagtcccgaagtcccgaat tgaaatacatcaactttctgaaaaaaaatattacactaatcagaagtccc gaggtcccgaagtcccgaattgcaatatatcgaaaatctattaaaaaaat cacaccatacctaagtccctaagtcccgaagtcccgaagtcccgaatgga aatacatcaactttctgaaaaaaaatattacactaatcagaagtcccgag gtcccgaagtcccgaattgcaatatatcgaaaatctattaaaaaaatcac accatacctaagtccctaagtcccgaagtcccgaagtcccgaatggaaat acatcaactttctgaaaaaaaatattacactaatcagaagtcccgaggtc ccgaagtcccgaattgcaatatatcgaaaatctattaaaaaaatcacacc atacctaagtcccgaagtcccgaaatgaaatacatcaactttctgaaaaa aatattacgccaacccaaagtcccgaggtcccgaagtcccgaattggaaa atatcgaaaatctatttaaaaaaaataacactATACctaagtcccgaggt cccgaagtcccgaattgaaatgcatcaactttcagaaaaaatatGACACT Aatcaaaagtcccgaggtcccgaagtcccgaatttcaataaatcaaattt ctgagaaaaaatattacgccaaccaaaagtcccgaggtcccgaagtcccg aatttcaataaatcaaatttctgagaaaaaatattacgccaaccaaaagt cccgaggtcccgaagtcccgaattgaagtatgtcaaaattttatcaataa aaaatattacaccaacccaaagtcccgaggtcccgaagtcccgaaatgAA GTACATCAACTTTTACCCCTAATCTTTTCATACTATTACTGCCACCTCCC TTTACATCCATCTCACCCCTTTCTCACCCTCCCTTTGCATCTACAGTATC TCACCCCTGTCTTCATGTATATCTCTGACCTCTCTTTACGGGTCATCCCA CCCTTTATCTTGTGTTTCATCAATCATTTATCCAAGCCCCTCTTTTTGCT TGAGTTTCATCCCACCCTTGCCTAATTCAACAATCCGATCCTCCTTCTCA CCATGTCTAATCTATCATTCTTTTTCTCCGGTCCTTTTTCAACTTAGTTC CACCCCACCCGTTTTCCTTCCTTATGTGAAATTTTTATCCATGTCCATTT CATTAatctcacccctgtctcactgtaTTCAATTTATCATTCATTGTCTC CGCCCCTCTTTCACCCCCACCtcttttgatagatttccaaTCTTTCTTTA TGTGAAATTCACTAAACTCTCCCCTCTTTCCACTCGAGTTTTCCCCAACT TTGTGTGGAAATTACACCCTTGTCTATTTCATCAATCTCACCCCTGTCCA ATCAAATTTAATCAATTAGTCATTTCCCCCGGTCCTCTTTCTACTTGAGT TTCCATCGGGACTTCGAGACCTTGGGATTTTTGATTGGGGTAACTTTTTT CAGACTATACTTTGGTAAATTTCCATTCGGGACTTCGAGGCTTTAGGttg gtgtaaatttttttttctggtagATTTTGATATATTATAATTCGGGActt tcgggacctcgggacttttggttggtgtaattttttttcataagtttgat atttcgggacttcgggacctcgggactttaggttggtgtaaaaaaaattt ttctggtagaattttgatatatttcaattcgggactttcgggacctcggg actttaggtttgtgtaattttttctttgaaatttgatatagttcaattcg ggactttcgggacctcgggacttttggttggtgtaattttttttcataag tttgacatttcgggacttcgggacctcgggactttaggttggtgtaaatt tttttttctagtagaattttgaattatttcaattcgggactttcGGGACC TACAGACTTTAGGtttgtgtattttttttcttcgaaatttgATATAGTTC AATTCGGGActttcgggacctcgggacttttgtttggtgtaatttttttt cataagtttgACATTTCGGGAgatcgggacctcgggactttaggagggtg taaattttttttttctgatagaaatttaatatatttcaattcggttggtg aattttcttttcagatagAATATATCTCAACTTATTCTGTTTTTGCGTTC TGTGAAATACACATAAAAAATCATGACCGacgttgtaaaaactccagctc atccgcAAATTATAAACACGCTTTAATTAGTGTTCAGTGTGGAGCAAAAA ATATGATCTCGTATGAgtcatatatttttgaaaattgtctgGTACTTATA CGTATTATAGAGGGCTctttattggaaaaataatCAAGTAATTTTGCCTC TTATCCCTAACCTAAACAAGATTTAGTtccaaaaataagattttttcttt tctgactGAACTAGGTCATGTTGCATTCTATTGTTAGTAAAAAAAAACGG GGGGATTTCTTCCCCCTAAATTTGCCCGTGGATTTTTGGGAATAAATCTT CCTTCGTGAAATTTTGGTAATTCTCATGGGTAAACTTAATCTCTTAATGT AGGTCTATTGTGAAGATAccgggggaggggggtactGATCTTGATGACCG ATGAGGACATGTCGCTGGAGTTTGAAaggtggaccctgtcagatatgaat atttggtaaatttggtatcctgtcagaacgaaaaatcgcaatattttccc attttcaccctgaaaagtagCAAAGATACTAAAAGCagacaaaaaatcga aaaagtttctaatttccaccctgaaaactgtccaaaataaccaaaagtgg ACCCTGCCAGATACCTATTTcgaaaattattgaattttggaccctgtaag actaaaaaagggaccctgaccagcggcacttCCCCGATATCAAGTTTGCC TAAGTGTCTAAGTGAATATTAGGTCCTCAGTCTTTCCATTATTTTATTGG CCTTCTTGTTGTAGGGCATAACATCTCTTCCCACTCCCCCGATCTTAATT GAAGTTATTTCATTCCGACTAGTAACAGTTGTATTAACAATTTTAAGAAT GATCTGCAAAATTTTCGGTCGATCAGTTATTTGGTTGGTGTTTTCAAGGC CattatcaaaatgaaaaaacgaTGGATGTTGGCTTGCTATCGAAAAACTT GTATcataattatttttgtatttttctgttAACAGGTAACCCATTAGAGG AAAAACACAACACTGAGGGAGATTGGAGAGATCTAGCGACCACCAAATTA CCAAAACTCAAGAAATTAGACGGTattctttttttcgtttttcctaACCC TTAAAATACCATAATGCAACCTCTCCTCCACTCTTGCATATCTACATTTT TCATATCTACAGTTCAGGCATAATTTTGCAGACACAGTTGACCCCTTCTG CAACTGTCGACAAAATTCAGTAGAAacaacacagcattttttgatgcatt gctctgattactctaatgacagacttgtgatgtttggcagccttcttcaa cttgacataaccttgtttccattcaatcccaaaacattgtgtagaatact tctttatggctACCCCGATTTTAGCATTGTCCAAAATCACGATATATTAA gtataacaataaaatttatctgtgatacaagccgttttgggggaccgtta ttttagtattttactctaactgctctccaagctctttttgtttttgtctt tttattttttgttagtatttatcctctgtagtaagtttttttttcccatg catttatcaattgattttttaatttattgttagcttagtttgggttcctt cctcctggcggtatgatctggtggtccttttgtNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattcat gcgAATTCTAGGAAAATTTGTTGATTGTGTGATTATTTTCACCGTATGGt ggtaaataaataaatctcaGAACTCTTGAATTGTGAAAGAAATCTAATTA ACATATTGAGAATTTTAAAGGACCCCACTCTTCTCTCACACCTTTTCGTA ATTGGTTTAGCTCGTAAAACAATAACATGGGCCTATGAGATTCCCTCTCC CCTGAAAAAATTAGCATAGGAGTCTTCACTGATGAGAAACCCAGAAACCT CAAGCGATTTACACCTCCCTTGTCAATTAGCTCTTTTATTTCATTCCCAA TAAtccacaaatgattttttacTGGTTAactgagacagggttgtaaaaaa taccaaaacttgCGAAGGAATTTCAACAGCTAGAAAAATAACCTGAAAAT GTCTTCTTAGTTTAGACTCCTATTTTCATGAGGTTTTTAGAGTAATTGGG CAAAAAGAAGTGCCTCTCTTTTTCTTTCAGCTCAGTTTGTTTCATTACTT GAGTACTGTTTTCCCCTTATCAACCATGTCAATGAATCATTGCATATGAT TTCGAAATGACATTTATTTGGCACTAAAATCTAGTTTTTTGGCTTGTTCC TCGAAATAACTTGTAACAAAACATTCTTGTTATTTCTAAACTTTATTTGT TTGAAAGTATGTACAAACATACAAACACAGACTTCGGCGATCATTTTAgg gaaattgaaataaattaacAACGTGTctgcaaaacaaaagaaaataattt gagtactttcgttttctataaGTCGTCATTTCATCACCGAGGGAGTCGTA CAAATTTTAATAGAATACACTCAATTCCTTTTATAAGCGTACGGGAAGAT CGGGTCGAGGctcaatatgcttagcaaaatctcattttcagctttaattt atgcttatttatatgcttaAACTTCGATTTGCTAATTTTCTTTGggttca tgaaaatttcgaTTAGATTCTGCTCaaagaatgatttttttttgtaattt taagctgcaggcgaaaatctttggtctaataaagctcaaacagctttaaa agtaaccctaagaaggtcagcgttttagaaaatctgcgcgattttttttt tcgttctagCTTGGAGTTATACGTATAATGCTTATTTTTCACCGAAATCG AGCCTAATGCTTATAAAcgctatgcttataaaacaataCGAGTGTATCCT TTTTTACTTATCAGGTGTACCTGTCGTACGACAAGATGAGGAGGAATAAA TCAAATGAAATCCAAGATGGCTGATTCAACCCTCGGATTCAACGACCATC TAAGATCTTGTTCCGCGAGCgcttatttcttttgtaaataTTCTAGATGA TTTCTGATAAGGTTCTACTGTATTCTTTAAGGCCCTGTATATTTTTTTGG TATGATAAGATTAATATACTAGATGATAATTTATTTGTAAATggtctttt ttttaattctaaaagttatgaaaaataatatttcaatgtTGTCatcaatt ttgagtttaaaattccttttttggGCTCATAATGACACTGGAATTCTTAA GAGGTATATTTCATCATAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054234TCONS_00054234Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054234-proteinTCONS_00054234-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:811196..823066 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DNAL1dynein light chain 1, axonemal isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
139.51 145.7 158.33 160.97 181.55 149.52 147.57 148.21 80.96 90.31 62.75 65.99 9.2 8.63 10.32 11.97 21.52 25.86 13.21 12.78 21.71 18.43 34.7 36.08 126.97 114.98 35.55 29.92 19.43 17.6