XLOC_034898 (gene) - C. hemisphaerica

Overview
NameXLOC_034898
Unique NameXLOC_034898
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:1278434..1285471+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034898 ID=XLOC_034898|Name=XLOC_034898|organism=Clytia hemisphaerica|type=gene|length=7038bp|location=Sequence derived from alignment at scaffold_253:1278434..1285471+ (Clytia hemisphaerica)
TTCTTTGACGGTATATTGAATAGAGCCATCGAGACTATTTGCATAACTTT ACGGTAACCGATTAATCATAACAAAGCCAcgtaaatttttttcgaaagca CATTGCACCAAAATCTTACATTTTTAACTGATTTGCCGCTGATCGTCTGT CACTGATATTTTTCCACTGTCAATTCAGGTAATAGTTTTCATATATTCAC TATAAAGTAGTTAGGAATATAAGGTAAGGGATTGTGGTACtagtataaga attgcgaagtaATCCAAAAACTATGTGTGCAAAGTTTTTTGCAATCAAAA GTTTTACACAGTTTTACGAGGCGACTAACTTTCAATTCACAAATCCATGA TATTTTagataccgtgagattgggtaacttgcatctgtggaggctaacat gcatagccctcaaatgaaataCCTGGCTGGtcactaaaatagaaaaataa atcaaaacaagaatggtagagtagagctgcgagcggagctgcgtagttgt attttaatgaccagccaggtcattcatttgagggcttgcttatgcatgtt agcctccactgatgcaagttacccgatctcacggtactgCATTTTGAAGA AACAGGGATGGTTAAAATTTTTGCCTTCCATGCCAGCACACAACACACTT GGTGTACTGTATCAGATATCTTTGTCAATTTCAATGTGTTTAATTTGTAA TTAGAGTAGAGCCTTATGACAGGAGGCTTTAGCTCTGTagagctctaaaa cagcatctataaaacatgaaaattggaatatgatttttcaatagaccttt tcgcctttccatccgccatcttgaattgtatgcaaaaatagaggaacgaa aaagccttggttggatttagttggaaagtatgcaaaacatatgcaagttt acacaaagattaaaaagacaacaaagcatcttcaaagaaatattataatc attagaacaataatagatggaatttctcaatccaaaaagaaatattcaca gaacaacaaaagccttttagaaatttgttcttaaagacatagcatattct gttttcatgccattaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgctt gttctaagagatgagcgaatataattatttttagttttcaagagaagcaa atttaatctttcttctacaagattacactttaatacaatgccaattatgc atttaagttttatattaatactttctttttgcatatgttttgcatacttt ctaatggaatttcaccacggcaattcggccaccataatttttgcatacaa ttcaatatggcggatggaaaggcaaaaaggtctattagtatcaaaactat aaagtgcaaaCATCAATATATACttatataatctagataggaaacaaata ttaaatttgattctttttttgttcgtatttctaaattaaatTAACTATta aagaactatttacaaattattttctttaacgggcgttgaatcgacattga catatttaatgatgtcataatcaatgccgtgcatattttgtcaacatcat tttcattggataaataccattaaaatatacaagataagtaaacataaatt tatcgcccgcgagcacagcttagctaagcgcacctatcttattcattatc taagaattgaagcgggcaaagattatcgcgcgggctgatagcggacaaag gttatttgaagatattttcagttataatccaaggtagaacaaactaaaca tagaaagggggtattttttagtgctctatNNatttttgaattctatgttt agatttttctacccagccctgttgctatgtacgcgcaccctgttgctaag acctttgcttgaaatcgaaagtgaaaccaagataatttagcgcacactgc cgttcgCGTATTATCGATAAAGTggaatgaggtcctgactgattGCGTCA GAGCgaagctttgtttttattttagtttttatctttgaaagacccaatcg gatttaggcagggctgtcggatttaggaccactacTCACggtatgtcaga tctaacaaaattaataacggcactgttATCATTGGCAATATgtgagtacg cgaagcgattctagctttacgatagtgccgcagatcatcagtggatagta ttcaattattattatccctttattttctttcctaaaacttttgcaaaaaa aaaggaaaaacaaaaaagttgtattttttactctattcacatactgaact tgaaagatcttctatgtggcgtttttttgcaaacttcaaaaaactgattt ttgtcccgcttgCGGGACTTTAGCTTTTAAAGTGCTTGTgtcaggctgca tcatttgagaATTTCAGGCGTGTGGTCAACTTACATGCATGATTGGCATT ATATTATTAAGTGTAATCTtttagaagaaaaatcaaatttgcttctcttg aaaactgaaaataatgtttttgttagAAGAAAAATACCAATGCGTTTCAA TGCGTTTTATTCAGCAGCATATTATCTAATtcacaaattgaaatattttc cagGTGAACATCACATCATGAGTGACAATGAGAGCGATGATGAATTTCTC AGTGCTGATGAGGGAGAATATGAAGATGGAAAGGGAAAAACCTCAATTGA TGAAGATGAAGTGGACGAGATTATGGACTTATTGATGAACAAAGaacaaa tttcaaacaaaaatgaaagtttgcTTTCAGCTAATCCCACtgcaaagaag aaaaattcatcaATTAATGAAACAACAACAAATTCAATTAAAAAGCAAGA AGAACCATCAAATGATCAAATAACTAaagacgaaaataaaaaattgaaaa ttggggAAGAGAATCAAGAAATTAAATCAGCTGAAAGTAATGAATTGAGA AAGAAATTCATGCCAGAAAATGAGAGACCTCTTGAAGTGAGCAGtgataa agatgaaaatgaaactgAAGAACCTCCATTAGAAAGCTTGGAAGATATGA TTGAAGAGTCTTTGAAAGATGAATCAAAGACAAACACTGAAAACCAAATT GAAGACACTAAGGAAAATCATGATCAACTTATAGAGCAGAATGAGGTTGA AGTTGATAATCAAGAATCACCAATCATAATGGAAGTTCTGTCTGAGAACA ATAAAGAGATTGAATCTTTGGAAATTGTCGATGAAAACCAAGCTGGGCAA CAAGAATCTtcaaaagaagaaacaaaaccAAAACAGCCAAATGAACTATC TAGTTTGAAATCCAACGTTAAAGTTACTACTGATTCCGATACTATAGAGA AAAATGAGGATTCAACTAGCAGCGATAAAAATGTCAAGGAAATTCCTGTA GTTAAGTCTGAAACTAGCATTGAAAATGAAGTGGAAAATACCAGACATGA CCTTGATGACCTTGATCTGGATGATGATTCTGATGaggaagaaaatttaa acaaacCTTGTGAAAATGTTTCTGAAAATGTTACAGAGGAAGTGCAAGAA CAGCCTGTAGCTCAAGATTTGCCTGTCAAAGAAGTTGAAAATGAGTGTAA TGAGTCTACCACTGAAAATGTATTAAATGAAGATACCCCTACAATTCCTG AGAGTGAGACAAAGGAATGTACTGAAAGTCAAACAAATGATTCTTGTGAT TCCGGAATCTCTGTTGCAAATGATGATATTCCGAACTTGGAGAAAAACAA GCAGCTCTCTGGGGAAGATGAAACAGAATCATCAACACCAACGAGTGAGG ATAAACCATGCACTCCTGAAAACGATTCTGAAACGCAGGAAGAAACAGAG CCTGAAGGTGTTGACAGCTTTGATGAAGGAAATGAATGGGGTGATTGGGG AAATGAGGAAATTGAAGTAGAAAATAAAAGGTaattcaacttttttcttt ctacACTTTTCTAAAGTACTTTTCAACTTATTCTAGCTAAGCtttgataa attttggcgggtNGGGAAGAGAATCAAGAAATTAAATCAGCTGAAAGTAA TGAATTGAGAAAGAAATTCATGCCAGAAAATGAGAGACCTCTTGAAGTGA GCAGtgataaagatgaaaatgaaactgAAGAACCTCCATTAGAAAGCTTG GAAGATATGATTGANCAAAGTAAACTTTGCTGCAAACTTTAATTGgtgat gggtcatttatcaaatttggttCATTGGATCAAAAACTACGTTCAAATGA ATGATAAACTTACTTTTATATTGTGAAGTATTCTATGACTTgaattcaaa gttttcaaaatattattgatATAATTCATATGAGGAATTTTTTcttattg ttgttttgttttagtgtcaatcaaaacaatgaaaaatctAGCAAGTCGGT CTCTGAAAAGCCACAAACTCAACCTGAGCCTCCAAAGCAAACGCAACAAA GCCAAGCAGCTTCTCAACCACACGGAGACTGGGGATGGGATTCATGGGCA GATGATTTTCTCATACAAGCAGCAGGAAAAGTTAGCAACATGTTGGAATC TGTTGAGGATCAACTTGGTATTCCTGATCCTACAAAAATGGCTCATGTTG TTTCTAAAGAGGAACGGTTATCCCCAAAGCATTCCCCAGCTCACAAAAAC AAGGACAAAGTAAAATCTGTAGAAGTTCCAAAGACCAAAGAAGAACCGCC TGTtcctcaacaacaacaacaacaacaacaaacaccGGCAGCGCCAACAG GTAAATTAATGTCAAGATATATTTCCATCGTTGAAtcgttgtttttctct tttttagacTCTCCATTTTTGAACTaataaatttttcatagaaaagcaGA TGGGATCTTCTATTACTTTAAAACATTTCCATATGATTACGTCATATTAA TAGATTATAGATTTTTGGAGATCTCTGCACTTTTTCAGGTCTGATTGAAA TCCTCACGTATTCATGCTGAAGTTATTTGATACCagcttgaaaatttctg atgtttttcttttattttccagGTGGTTCATCCTGGTTTGGTGGCTTTGG TGCATCACTATCTGGTCTTGTTCAAAACACCAGTACTGATCTTGTTACTG GAGGTATTGGTGCCTTAGAATTTATTGGAAAGAAAACAGTTGATATGTTA TCAGATGGTGACCCTGGTTTACGTCAAGCAAGAGACACGATAGCtggcaa aaagaaaacaaacctCTCAGCATTGCTACAAGAAGCTAAAGAAACATCAG AGAAAAATCCAAGTACACGTGCAAAGACTTCTGACGAAATGAACTTTAAT gattattttgagaaattccaagGCAATATAAACTTGGATGCTTTAGAAAT GTTATCAAATGAGTGCGATAATAAACTTGAACGGATTTTGCGCTTACAAT CACATGAAGCAAAACAGGAGACCGAAGAAGTCCTCGCAGAGACGCAAGAG AAATTTTCACTTCCTGAAGATATCGAGGAAAGCCAATTCAACTCAGATTT CAAGAAAGATTTATTTGCAACCACAAAAcagttgaaaatgaaagtaacat GTTCCAAACTCTTAAACACGTGGACCAAACTGAAAGAGAAGTCTAAAAAT ACAGCCACTGAACCTAAAGAGTGCTTCAATAATACGATATCTGGTTTAGC AGAACTAACCTCAAAGTGTGTTGAATTTTATCGGAAAGTAGCTGATATGT TTTTAGCTACAGACATGCAAGCCAGGGACCTTGCTTTACAAAGGGCATCA GCTTTACAATCCATATCGGTCATGTTTTTGATTGAGTTGACTCAACTGAC AAATAATTTTGCACAACAAATAGCTGATAATGTCGATCCACAAAAGATTG TCACGGACATTTATTTGGAAGGCTCTAATTGCAGCTCTATTGTCAGAGAT TGTCATGATTTGGTACTGCCTATACTTCAATGTTGTATtgtgaaatgagt ttattttaaatttattattattaataacTCTCTTTTCAAGGGTCCAGCTG TTACTTatcacattttgaaaatttgcttttcACTCTGGCCCTTCATGAAA GGTTTTGATTGCATGGTCGTTTTTTTAATacctccaaaaattttgaattc ctGTTCCTTGTGACAAAATTCATTATCTTTCAGgttcaaattattttctc aaatatttattACCCAATCCGATCTAAATTTCTGTTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055461TCONS_00055461Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055461-proteinTCONS_00055461-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1278434..1285471 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.43 36.53 10.96 7.37 19.72 16.16 34.98 38.35 16.53 15.99 13.92 10.88 15.13 12.5 12.53 13.55 18.89 15.52 8.16 11.78 13.24 11.84 34.74 32.8 20.13 24.94 10.13 6.51 24.85 25.99