XLOC_035032 (gene) - C. hemisphaerica

Overview
NameXLOC_035032
Unique NameXLOC_035032
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_256:312..8639+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035032 ID=XLOC_035032|Name=XLOC_035032|organism=Clytia hemisphaerica|type=gene|length=8328bp|location=Sequence derived from alignment at scaffold_256:312..8639+ (Clytia hemisphaerica)
CTTTTCTTTGGTGTGTATTCTTTTATGTTGCTTTAAAGAACCAtttgttt
taaagcatttaccacattcttcacacTTGAATGACTTTTCTTCAGTGTGT
ATTTTTTTGTGTCTCTTTAAAGAACCCtttgttttaaagcatttaccaca
ttcttcacatttGAATGGCTTTTCTTTGGTGTGTATTCTTTTATGTTGCT
TTAAAGAACCCtttgttttaaagcatttaccacattcttcacatttGAAT
GGCTTTTCTTCGGTATGTAATTTAATATGTTCCTTTAAAGAAGTCtttgt
tttaaagcatttaccacattcctCACATTTGAATGGCTTTTCTTCGGTAT
GTAATTTAATATGTTCCTTTAAAGAAGTCTTTGTTTTAAAGTATTTACCG
CAGTTTTCACATTTAAATGGTCTAATGCTACTATGCACTATAAGATGCTG
TGTTAGAACATCTGATCGGgaaaaacatttaccacattcttgacacttGA
AAGGTCTTTCGCCAGTATGAATTCTACGATGTTTCTTAAAATCACAGTTG
AATTTAAAGGATTTACCACACTCTTTGCATTTAAAACCTTTGCCACGTTC
TTTTGTGACAAGACTATTTTTCCTTGTCTTGGTTATAGGATTTTCTGCTT
GTAAATTAGTGGCATATTTTGTTAAGTTCGTTGGTGGAATTATTTCATCG
AGTTCaattttaatatcaaaagaGTCTGATTGATGCTGAGAATCGGATAA
CTCTTCGACATgggccaaaaaattattttcctcttCAATCTTAATCTTCA
ATAGTATATCATCATTTATGTTTGTATCAACAAATTCATGTTTTTTCTCt
ccaaataaatcaaaattagcATCCTCTGGACCAATCTCGAGTGTAACCGA
ATTCATCTCATTTTTGTCACGTTCCATTTCGTTGGAAAACTCGTCGATTT
CACTTTTCATATTAATAGTCTTTATTTTcctgtaaaaagaaaagaagttg
TTACAATCAATTTGTTTAATCTATTATCAATAACTTGATATTCTGTATAA
TAAATTCCGGGTGCATTGAAAGTATACAGTTTTGTTTAAATATTGTGAGC
GCACTATCATAGGAGGAAGTAGAGGAAAGTTTAAAGTCGTTTCTCTCAAT
TAAAAGTTATGTTAGAAAACTGACAATTTTGACCTACCTAAAATGACCAA
ATTCGTCAATAACAGTaatcaaaataataatgaaGAATCTACTTTTTGTA
CGTCAAAATTCTCAGTTTTtaaaacacaatttttgattgactgaaccaat
tttcaagttttatataCTGTTATATCCCAAACTTTAAGTTAAGCTTTCCT
CTTTAGAATGAAAAAAGAATCTACGAAAAATCTTACATCTTAAGCTTACA
ATAACAATTATTCCAACACCGAGTAAAAAAGGACTTAAAAGGAGCttcaa
ttttgttattttgttcataATCATAATTATTCAAACCTCGAAAATTGAAC
ATCATTAAACAACTATTTTGTTTGAGAAGAATATTCAACAAAATATGAAC
TAAACATTATTATATATACTTAATATTTCAAATGAGTGATTTTACTTAAC
CTCCTCTCGTCTTCGTTCTCCACAATCAGACTGGCAACATCAAAtagatt
ttgattattttagttGACAATTCTTTATATTTACTTTTTCCATTCGGTTG
AACTATTTCTTTGAAATGACTTTTAATATGAACAGTCAAATGACTTACAC
TGTTAAAACATATGCCACATTTGCTACATCGGgaaggtttttctttttct
tcaatttggaCATGTTTTTTCCGTTTATGACTCTTCATGTGAATATTCAA
AGTATCTTTTCGGGAAAagcatttaccacattccttaCATTTAAATGTTT
TGATTCCTGTATATGTTTGAATGTCGTATCAAGTTACCTCGTTGGGAAAT
ATGTTTAccacatttttcactttcataTGGTTTGATTTGTAATCATCTTT
ATAaatttgtcaataatttgaCTCCTGTTCCCTAAATTTATTAGTATCCC
TTGACATTATAATTTGGCAATACCTAACTCAAAAAGTGGCTTGTATTTCA
gcaaaatttgactaaaatattttcaattatttaatCCACATTTAGTAAAA
TGAATGGaataaaaaatgcttaaaatacGAAAAAATTTGGATCAATATTG
ATAAACAAAGAGCTAACTTTCAATTGCTACACGGCAATTCATGTAGATGC
TATTTTCACGCAATGCAGCGTATTGAAGTTTTTATTTGAAGGAACAATCT
ACAATACATTTGCCTTGTATTAAGATTGCAATTGAAGATTGTGAGATAAT
TCCTTATTTCTAGCATGTTCCAATTATAACTTTTTGGTCCTAAGATATAA
AATATCGTAAAACAACTGCCTTGTGAATAATACTCAATTTTTAGCCTATT
ATCGGCGACACacaaaatatattattttaatatttcCAACGATCAATTTT
CTTTAACCTCGTCTCTTCGTTCTCGACAATCAAGCTAGCAACATccaata
gattttgattttgatgtatTTTAGTTGATAATTCTTTGAATTCACTTTTT
CTATCCGGTTGAACTATTTCTTCGGAGTGACTTTTTACATGAGCAGTTAA
ACAACTTACACTGTTAAAACATTTGCCACATTTGATACATTGGAGAGGTT
TTTCTCGTTCTATTAATTGGagaagaagtttttttcgtttGTGAGTCTTG
ATGTGAAtattcaaagtatttttttgggaaaagcACTTACCACATACCTT
ACATTTATATGATTCTATTCCATTGTGTATTTTTGAATGTTGAATCAAGT
TACTACGTCGAGAAAACTGTTTACCACATTATTTACATTTAAAAGGCTTT
TCGCCAGTGTGAATCTTTACATGCACATTTAAACTACTTTGTCGAGTAAA
ACATTTACCACAACCTTGACACTTGAAAGGTCTTTCGCCAGTGTGAATTC
TGAAATGTCACTTCAAATCACAGTTGAACTTGAAAGCTTTACCACACTCT
TTGCATTTAAATGATTCGATATCACTGTGAATCTTTACATGCACATTTAA
ACTACTTTGTCGAGTAAAACATTTACCACAATCTTGACACTTGAAAGGTC
TTTCACCAGTGTGAATTCTAAAATGTCTCTTCAAATCACAGTTGAACTTG
AAAGCTTTACCACACTCTTtgcaaataaaatttcttttactCCTTTTTGG
GGCAAGATTATTTTTCCTTTCCCTGATTTCTGCATTTTCTGCTTGTAAAT
TGGTGGCATCTGTTGTTAAGTTTGTTGGTAGAATTATTTCATCAAGTTCa
attttaatatcaaaagaGTCGGGTTGATGCTGAGAACCGGATACCTCTTC
GACAGGGGCCAAAGAATTATTTTCCTCTTCAATCTTAATCTTCAATGGTA
TATCATCAGTTATGTTTGTATCAACAAATTCATGTTTTTCCTCtccaaat
aaatcaaaattagcATCCTCTGGACCAATATTGAGTGTAACCGAATTCAT
ATCATTTTTGTCACGTTCCATTTCATTGAAAAACTCGTTGATCTCACTTT
TCATATTAATAGTTTTCTTTTTACTGTCTTTATTTTCctgtaaaaagaag
aaaagttgttagaatcaattttttcatctattatCAATAACTTGATATTC
TGTAAAATAGATTCCTGGTACATTGAAAAAAAGTaacttaaaggaagaaa
ttttggcgggaatttaatttggcggtggcttaaaaatttaaccttaagat
gacgtcaaaacagcgaaaaaatagcaaaaacaccttaacagatatcatat
tttcaaaatgtttaatttggcggaaatttaatttggtggatggcggaaaa
aagaaattttggcggaaacttaaattggcggatttcagtcaaaataataa
aattcgttaaaaacagtaatcaaaattttaatgaagaatctatttttttt
atgtcaaaattttcagttttttaaacACGATTTTCGATGGACTGAACCGA
TTTTAGTTAAGTTTTATacactctcgggtacctaatagccgtcccccccg
ctaattaatttttcaaaaattttccaaccaggacattcttattccaaccc
tccCCCCACCCGCTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTATG
CAAGTACATGTGTCTATATAAGTTACCTCTTTCagaaaaacatttaccac
attctttgCACTCAAAAGGTTGTTCTCCAGAATGTACTCTCATGTGACCT
TTTAAACTTTCTTTCCAtgaaaaacatttaccacattcttcacatttGAA
TGGTTTTTGTCCGGTGTGTATCCTCATGtgaacttttaaattttcttttt
tcagaaaatatttaccacattcttcacatttGAATGACTTTTCTTCGGCG
TGTATTCTTTTATGTTTCTTTAAAGAACCCTTTGTTTTAAAgtatttacc
acattcttcacatttAAATGGTCTAATGCTACTATGCACTATAAGATGGT
GTGTTAGACCATCTGATTGGgcaaaacatttaccacattcttgacacttG
AAAGGTCTTTCGCCAGTATGAATTCTAAGATGTTTCTTCAAATCACAGTT
GAATTTGAAGGATTTACCACACTCTTTGCATTTAATACTTTTGCCACGTT
CTTTTGTGACAAGATTATTTTTCCTTGTCTTGGTTATAGGATTTTCTACT
TGTAAATTAGTGGCATATGTTGTTAAGTTCGTTGGTGGTAGTATTTCCTC
GAGTTCAATTTTGATATCAAAAGAGTCGGGTCGATGCTGAGAATCTGATA
CCTCTTCGACAGGGGCTAACGAATTATTTTCCTCTTCAATCTTTATCTTC
AATAGTATATCATCATCTATGTTTGCATCAACAAATTCATGCTTTTCCTC
TCCCAAGAAATCTAAAAAAGCATCCTCTGTACCAATCTTGAGTGTAACCG
AATTCATCTCATTTTTGTCACGTTCCATTTCGTTGGAAAGCTCGTCTATT
TCACTTTTAATATTAATAGTTTTCTTTTAACTGTATTTATTTtcctgtaa
aaagaaaaaaagttgttaCAATCAATTTGTTTCATCTATTATCAATAACT
TGATATTCTGTATAATAAATTCCGGGtgcattgaaaaaaagaatacaGTT
TTGTTGAAATATTGTGAGCGTACTATCATATAGGAGGAAGTAGAGGAAAG
TTTAAAGTCGTTTCTCTCAATAAAAAAGTTATGTTAGAAAACTGACAGTT
TTGACGTacctaaaataataaaattcgcTAAAAACAgtaataatcaaaat
tttaatgaagaatctattttttttatgtcaaaactTTCAGTTTTTTAAAC
ACGATTTTCGATTGACTGAAccgattttaaagttttatacactcttgggt
acctaatagccgtcccccccggtaattaattttccaaaaattttccaacc
aggaCATTGTTATTCCAACCCTCCCCCCTCCCGCTTAttagttttaggga
aaatgtttttgaaagttccctctatTGTTGTTTTAAatgctgatgtagta
aaaacaagtgcgacaagattatagaaaaagtttttgaaaaaatgaaaaaa
cattgaATTCCTCTAAGGgacttttactgatactctttcgaatgtttata
tgtttataataaatagaaagttttctatcttataatcNgttttgtttttt
attgaaaggtaTGACAatgctgatgtagtaaaaacaagtgcaacaagatt
atagaaaaagtttttgataaaatgaaaaaacattgaATTCCTCTAAGGga
cttttactgatactctttcgaatgtttatatgtttataataaatagaaac
ttttctatcttataatcaaaacattcgattgtaaatttgctcaaaatcaa
ctttgctttttttttgtttacaaaataaaaagaatgagAGGTTacatctc
gaaacaactttcgatctttcacttgtttgcaggNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTATTTTCGGGAAAAGCACTTACCACATTCCTTACATTTAAAAG
ATTTGATTCAATTGTGCATGTTTGAATGTCGTATCAAGTTACCTCGTTGG
GAAAATTGTTTAccacattttgcacaattaaAACGTTTGATTTCACTTTG
CAAGTACATGTGTCTATATAAGTTACCTCTTTCagaaaaacatttaccac
attctttgCACTCAAAAGGTTGTTCTCCAGAATGTACTCTCATGTGACct
ttcaaactttctttccatgaaaaacatttaccacattcttcacatttGAA
TGGTTTTTGTCCGGTGTGTATCCTCGTGTGATCTTTCAAACTGCCTTTCC
TTGTAAAaaatttaccacattcttgacacttGAATGGTTTTTCTCCAGTG
TGTCTTTGGCCACGGTTTTTTTGAGGCAAGATTATTTTTGTGGCAAGATT
ATTTTTCCTTTCCCTGGCTTCTGCATTTTCTACTTGTGAATTAGTGGCAT
CTATTGTTAAGTTTGTTGGTGGAATTATTTCATCAAGTTCaattttaata
tcaaaagaatCGGATTGATGCTGAGAATCGGATACCTCTTCGACAGGggc
aaaataattattttcctcttcaatctttattttcAATAGTATATCATCAT
CTATGTTTGTATCAACAAATTCATGCTTTTCCTCTCCAAAGAAAGCTAAA
AAAGCATCCTCTGGACCAATCTTGATGGAAACCGAATTCACTTTTTGTTC
GTCTTTGAATTCTTTATTCATATCAttagttttcttttgttatctttATC
ATACCTGGAataagaaaaaaggaaattg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055662TCONS_00055662Clytia hemisphaericatranscript
TCONS_00055663TCONS_00055663Clytia hemisphaericatranscript
TCONS_00055664TCONS_00055664Clytia hemisphaericatranscript
TCONS_00055669TCONS_00055669Clytia hemisphaericatranscript
TCONS_00055670TCONS_00055670Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_256supercontigscaffold_256:312..8639 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.75	12.4	7.5	4.83	1.34	0.74	1.42	0.45	0.66	0.07	0.89	0.18	0.28	0.43	0.26	0.87	1.09	0.88	0.19	0.05	0.99	1.21	7.61	7.63	1.22	2.02	0.7	0.6	3.81	2.85