XLOC_035055 (gene) - C. hemisphaerica

Overview
NameXLOC_035055
Unique NameXLOC_035055
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_257:8964..12586-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035055 ID=XLOC_035055|Name=XLOC_035055|organism=Clytia hemisphaerica|type=gene|length=3623bp|location=Sequence derived from alignment at scaffold_257:8964..12586- (Clytia hemisphaerica)
TTTGTCTTTGAAAAACGCGTTTACTAAGTTCCTTATTCTGATTGGTGGAT
TTTTTGATGACGATGCGTTTTTCATTATGAGATATATCTGTCCTGCCGTA
AACCGACAAATTCGGGAAATCGAACAAGAAGCTTCCTGCAGTTTTCTATT
TGACTAAAATGGGAGCCGCCATTTTATTTCTTCGAGCTGTTTCAAGAATA
TCTCAAGAGCAATGTCCTCAAACATCACTTCAACCATCAAGTTTTACATC
AAATCTAAGGGGTATCAGGTAGGGAGTCATTATTTATGATTTAGAACTTT
AAATTAAAATAAATTTGATATTTTTAGCTGTAAAACGACTAACAACTAAT
CAAAGTTTGGTGCTCGATGTTGTTGTGTTGTAGCCTCAGTTAGATTTCTT
TTGGAGCTTATTCAAATATTTTTTCTTTTCCATCAGACGAAATATAAACC
TAGGGTGGATTGTCCATGTTGTACAATATAGTCACTTTTTTTTTTTTGGG
AAACAACACCCAACAAGTGCACAAACAGTTCACCAGTTTATGTGCTTTCA
GACAAGATGAAATGACTGAAACTATTTTTATACTAGACTGGTTTGGTAAA
AAGATTCCCTTATCATTTCCCTTATTTATCCCTCACTTTTCTCAAAAAAA
TGTATCATCATAGAATAGACCTTGATCAATAGAGATATTTGCCTAATGTT
TACAATTTGAAAATAAGCTTTCATAGTAGACAATTTGATTCCTTGTATAT
CCACAATAATTAATTATTAACAAGTACCGTGAGATCGGGTAACTTGCATC
AGTGGAGTAACCTGGCTGGTCATTAAAATATATTAGAGCTACGAGCAGAG
CTGCGTAGTTCATTTGTTTTGAAATTTTGCCACTTTGATTGGTCAGTCAT
TTGATGGCCATGCAAGTTTCCCTCCACTGATGCAAGTTACCCGACTTCAG
GGTATATACATTCTCAGGCGATGTCAACCAACCAATTAATTGGAAGTGAG
GCAAAATAATTTGTTTTTGTTTTTTGAAAATGAAACACTATATTGAAGAC
AATAGGTATAATCCAAGGTTTATGTAATCAAATTGATCAAGTAAAAATGT
AGTANTCAACCAACCAATTAATTGGAAGCGAGGCAAAAAAATTGTTTTTG
TTTTTTGAAAATGAAACACTAAATTGAAGACAATAGGTATAACCCAAGGT
TTATGTAATCAAATTGATCAAGAAAAAATGAAGTACCTTCTATTAGATTC
TATGATTGAATTTTAATCTTGCGATTGACTTCAATTAATTTGATAATCGA
ATTATTTGGTTGACATCGCCTTTTGACATCAATTACAATCAATAATCGAT
ATAGATATAATAATTAAGGTCCAAAACATTGTGACCTAGTCTAAAACACA
GTGACTATCGGTTATCAATCGATATAGATCGATTTAATGTAATCAATTAA
TAAACGATATCAATCATATTGATAGGTACAATCGATAATATCGATTTCAA
CGACAAGTTTGAAATTAACTTAGAAAAATTAACTNATATTGATAGGTACA
ATTGATGATATCGATTTGAACGACAAGTTTGAAAAACTTAGAAAAATTAA
CTATAGATGTAATGATAAAATAATTAATGTCCAATTGTATTGGGTTGTAA
TTGTGTATTGGTTGGTATTTTCAGTTTCAACAAATTTTGATTTTTTTTTG
TGTTTCTTTCAGGCTTTTTTCACTGATGGCTGACCCTGGGACAAGCTAGG
AAGAGATGACCGACTGATTCTATAATTGTTGAGTTGCCTTTCTTCAAACG
GTAATTAGTAGGTAATATTTCTCGTACTTGCACCACTTTTTTAAAAGCAT
AAATAAAAAGTAGAGAAATATTATAAATTCAAATTATACTTTTTCTGACT
TGAACAAGGCTATTTATAGCAAGACAGTTAAGTCAAAAACCCTTATCCAA
ACCTTACCTCAATTAATTTTTTTGTAGAAATTAGAAATGAGATCATTAGG
TTTCTTTGTTGATTTTTTTTAGGGATGCTAAATGAATGTTGAACTACAAA
ACAAGATTTAATTGATTCAAACTGGGAAAAAGAAAATCATCTTACAAAAA
GGTGTATATGTTTATAACTTGATATTAACTTGTAACATATGTATAGTATG
TTGGCTTTACCCCCTTCACATACGTAGGCTTTTGAAATTACCCCCATCCG
GGGGGTACAAGGGTTGGCGAATGAGGGGTATGTGCAGACGGGACCTCCGA
AAACCAACCCTTAGAGAGACTGATTTTTGCTGAAAAGGTGACCCTTAGAG
AGACTTTTTGAATTTTTTTTTTCGATTTTTGAAGAAAGTCATACCCTTAG
AGAGACTTTATTACAATTTCTTCTCTGGAAATCAAAAAATTTTCTAAAAA
TCTTGAAAAANATCAAAAAATGTCCTAAAAATCTTGAATATTCCGGCCCT
TTGAGAGACTAATTTAAAACTTTCTGATTTTTCAAACCCTTAGAGAGACT
TTGAAAGGTGAAAAAACCGACCCTTACCGTCCGCACATACCCATCATCCA
TTTTTGCCTAAGTAACCCCCCCCCAGGCCCCTACTAGTATCCCCCAGATT
GAAGGGTTTATACATGAGCAATTGTTTAAATTAAGGGATTCTTGGAAAAA
GTATATTCAACTTCAACTTCCTTTTGTGTTTGTTGATGAAAATACAGAAC
ATCCAGCCAAACTTTCGCTGAAATTTGGTTCTATTGAAAAATGTTGATTT
GTACTCTCAGACAGGTGGTCTGAAATTTTTGAATAAAACTATTGGCCAAG
GGGTGTTATAAGAATGTCTCGAGTGGAAAATTATACAAAGGCTGCTTATG
ACCGCACCCTCCCCCTCAGAGCATATGTACTTTATATGAATGGTCCTAAA
TGATGTCCATGTGTTCTGTTTTCAAATAAATTTAGCCATGTCACAAGTGT
TCTAGTGGAATATTAAACACTCAGTATTCTCTAATTTCAAATTTTATTTT
CAGGTCTTAAAAGCTAGTGGAAGAAGTGTCTGGATAGCAATTTTCAAGGT
AAGGATATTTCAATTTGAAATAATTCTATGAAATTTTTGGACTGTGGTAA
TTTTTGCTAATTATTTCAGGGTACACGAACTGTGACAAGGAGTTGTACAT
AGTAATTAGTTCTAACACCTGTTTTAAGGGGGTCTGAACCATGTGAAAAT
TTCTCTAAGGAAAGGAGATCCCATTGGAAAGGAATTGAAATGAATTCTTA
TTTTTCTGATCAGGAATGGAGACTTTTCGGTATTTGTAAACAATCTAATA
GGAAATTTGCCCAATTTATGACCCATTCCCCATTTTTAGGCAATATTAGT
GTGGTATGTGAGTGGTAAGCAGTCAGATTGAGAATCGGAATTTTTTAAGA
TTAGGGGGGTGCCAAGATGGGAAGATCCGACCTATCCACACTATGAAATT
ATGTATGTTATGTAAATTTTATTTCTCTTTTTCATTCTTTAGACCTTAAG
GATCGGACTGATTGGATTGGATCGGACAGATTGCTCATCGTCTCGACGTC
TTGTAGCGATCAGATTCGTCAACCTTTATAACATCAATCCCATGTACTAT
TGCCATTTGGATTTTGAATTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055704TCONS_00055704Clytia hemisphaericatranscript
TCONS_00055703TCONS_00055703Clytia hemisphaericatranscript
TCONS_00055702TCONS_00055702Clytia hemisphaericatranscript
TCONS_00055701TCONS_00055701Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_257supercontigscaffold_257:8964..12586 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.39	0	0	4.49	2.36	4.85	4.8	2.24	3.44	0.45	1.08	0.78	1.11	1.6	1.45	2.53	1.54	2.36	2.01	4.41	2.52	0.85	2.21	0.24	0.42	6.4	7.07	2.87	3.48