XLOC_035155 (gene) - C. hemisphaerica

Overview
NameXLOC_035155
Unique NameXLOC_035155
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_262:11899..17346+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035155 ID=XLOC_035155|Name=XLOC_035155|organism=Clytia hemisphaerica|type=gene|length=5448bp|location=Sequence derived from alignment at scaffold_262:11899..17346+ (Clytia hemisphaerica)
TACAGGTGTAATGTTGAACAAATTGTTGGTACTTTTTGTGGAGATGATAA
CAAGCCACATGATATTTACACTCATTCTAAATGTGCTACCTTAAAATTGG
TCAATGGATATAAATATGCGAGTTATTTTCGAGTCTTGGCTGAATTCATA
GATCAAGCGTCTATCCCGCACTCTGATTGCTCCTGGTATGAGAGGTAAGA
TTTAGCCTACAATGTCATTTTAAAGTTCATGAAATGTCGTAAAAAGTAAT
TTTATGTGCATTTTATTGGGTGGAAATTACTTCCGCACGATAcaggttct
tgaaaaaatccATAAAGAGCGCTAGAAAGATGAAAAGACTTGATGAAAAT
GAGTTCctcaaaaatctttaatttgATAAACTCACACAACAAAAATTGTT
GGGTATTCTTCCAATGTTCTTAAGGTATTCTTCCGATGTTTTTAAGGTAT
TCTTTCGATGTTCTTAAGGTATTCTTTCGATGTTCTTAAGGTATTCTTTC
GATGTTCTTAAGGTATTCTTTCGATGTTCTTAAGGTATTCTTTCGATGGT
CTTAAGGTATTCCTTCGATGTTCTTAAGGTATTCTTTCGAtgttcttagg
gtattctttcGGGTAAAAACAGCTCATTGACCTCAATGAGCTATTTTTAC
CCGAAAGTAACATCGATTGATATGGCACAATTCTTGTTTATTTACTCTTT
AGGGTGTTAACAGAGCCAAGCGGTGTGATTATTTCACCAGGGTGGCCACA
CGGTACCGGCAAAAACAAAGTGGAATGTAATTGGAGAATTAAAACACAAA
ATGACAAAAGCATTACTCTAAACATAATGGATGACGATTTTCAATCGAAT
GATTATTTCCCCTCGTGCAAATCACATCTCAAACTCGAAGGTTAGTTTCA
TCTAGCGTGATCTTTTTGCGTATTTTTCGTTCAACTCAAGGATTGCCGAG
TCCTGATAAATTTTAATTACTTAAggactctgaccatagtccCGGCGGGG
AGGGGAGGTACTTAGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAACC
AAAAATAGCACTAGTGGACGGCAGGCTTTAGGATTCTTTTGAGGTTTCAT
TAATTTTAAATTACTGAGGTATTTAATCTGTCATACTTTCTTCCCTCAAA
AAGTTCTTTCTGCAGAATTAAAACCAGATTATAAGAAATCTATGGGGTAG
ACGGGGGTAGTtgggacagaaatattttagacgatacgcatcccctatat
caaatcatatcagaggggatgcgtgcagcctataCAAGTGCTTGAGAAAT
TGCGCAATACAGCACGTCGAATCTTTCTGTCATTACTCTGCGATgcaata
taaaaatattgccGAACAAACTGCAAGCGCTTGCAATTTCTCCTTGCAAT
TTGACGTTTTTCtcataaaacatttttatttgtatAATTTCAGACTCTTT
CTAAGGAGGTTACGCTTCAAGAATCTCCAGACGGAAGCAATGAAACAATT
GCAATGAAGCCGCATTAAAAAAGCTTaaaggttttgattttaaataagag
tgataccgtttgcttactcatcaattttaatttacaagctttttcgcatt
tttcgcacacagatgtggagcagaTTGGCaagaaagaggagaagaaaaac
atttttttgcttatatcagcataacataacaataggaagacactgccccg
atatgaaatatgtgtctgatttGAAACGGGAtcacttatttaaaaacaaa
acctttaagagacTGAAAACGCTAATCCGAAAGGTTTTGATtaccttaat
ttttttttcaggcaagCAATCAAATCCGTACATCTTTTTCTACAAGTACA
TTTGCGACAACGGAAAtcatatctcgagatctagcaacacatataatacg
tataaCTATGATGTCAACGTTGAATACGTATTCAAGAAANTATCTTGAGA
TCTAGCAAcacatataatacgtataaCTATGATGTCAATGTTGAATACAT
ATTCAAGAAGGTCTTTAACAACAAAAACTACAGAGGTTTAGCACTGGGAT
GGACAACTTATGACAACCCAAAACATCACACTCGTCAAAGTAAGATATTT
TATTGTTACAGTGAAGTCCCTGGGAgggtagactagcaagcgtctgtctt
tcttTGGACACATGAaagcgggaatagtgcttataatagaGAGTTCTCGT
CAAAGTAAGTATCTTAActaataatacaccttttcgatcgtagccgctaa
ttgccacgcgggcattttttgtctgttttaccaccctaaaaccatctttt
tttcgcacctaaagacaaaagtgtaaaaaaatgattgggtcgagtttagg
gtggtaaattaaataataaagtggcacgcgcctgaccgtgcGACTACATT
CGAAAAGGTGTAATAAACGGGATAAATAACTTTAAACCgttgaatccaaa
agttccattaagaatcaaatcgatctgattggttaaaacttaaaaacgat
GTCATTGACCTAAATGAAATAGTTACTAATCAGAAAAAGCGTTTGATTGT
TGAAGGTAAACCTTTTCATGAATTATGTCAAGAGGAAAACGCTTAcctcc
ttttcaaaatattacctactacagggtgtcccgaaaaaaattccTGTCTC
TGAGCACGAGGTCAAGTAGAAATTTGTTTTGTGTGTATGTCTAGTTTATC
TCTTTAACGCAACGCAGTAATTAACACTTTAATGGTTACAGTGAAGCAGT
AGCACAATAAACTTAAGATTAAAATATCAATTGTGTTgttaaataaatca
tttttatGAACTTTTTATGAACTTCAAACaaagtaaaaacattttaatga
tcGCATTATATTTAACCACANcctatatcaaatcatatcagaggggatgc
gtgcagcctataCAAGTGCTTGAGAAATTGCGCAATACAGCACGTCGAAT
CTTTCTGTCATTACTCTGCGATgcaatataaaaatattgccGAACAAACT
GCAAGCGCTTGCAATTTCTCCTTGCAATTTGACGTTTTTCtcataaaaca
tttttatttgtatAATTTCAGACTCTTTCTAAGGAGGTTACGCTTCAAGA
ATCTCCAGACGGAAGCAATGAAACAATTGCAATGAAGCCGCATTAAAAAA
GCTTAAAGGTTTCgattttaaataagagtgataccgtttgcttactcatc
aattttaattcacaagctttttcgcatttttcgcacacagatgtggagca
gaTTGGCaagaaagaggagaagaaaaacatttttttgcttatatcagcat
aacataacaataggaagacactgccCCGATATGAAATATTTGTCTGATTT
GAAACGGGAtcacttatttaaaaacaaaacctttaagagacTGAAAACGC
TAATCCGAAAGGTTTTGATTACCTTAATTTGTTTTTCAGGCAAGCAATCA
AATCCGTACATCTTTTTCTACAAGTACATTTGCGACAACGGAAATCATAT
CTTGAGATCTAGCAAcacatataatacgtataaCTATGATGTCAATGTTG
AATACATATTCAAGAAGGTCTTTAACAACAAAAACTACAGAGGTTTAGCA
CTGGGATGGACAACTTATGACAACCCAAAACATCACACTCGTCAAAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055835TCONS_00055835Clytia hemisphaericatranscript
TCONS_00055836TCONS_00055836Clytia hemisphaericatranscript
TCONS_00055837TCONS_00055837Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055837-proteinTCONS_00055837-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_262supercontigscaffold_262:11899..17346 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.52	0.79	3.38	4.63	7.66	6.44	14.26	7.19	2.43	0.84	0.96	1.03	0.43	1.3	5.09	5.23	2.9	3.47	6.12	8.94	9.89	8.81	5	3.72	0.1	0