XLOC_035165 (gene) - C. hemisphaerica

Overview
NameXLOC_035165
Unique NameXLOC_035165
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_263:124857..129168-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035165 ID=XLOC_035165|Name=XLOC_035165|organism=Clytia hemisphaerica|type=gene|length=4312bp|location=Sequence derived from alignment at scaffold_263:124857..129168- (Clytia hemisphaerica)
CGGCGGGAGAGTTTCGAAGAAACGGACGATACCAATTTGGCGCATCTTCA
CTCAAACGATTTTGCCTGACTGACCTCTGAGAGAGGTCAGCGGGATTTTG
AAAAACCACGGAAAACAGAGCAAAATTTCGTGAAGTCAGGAGGTGTGCTT
TTGGACGTTTTGAGCGGGAATATCTTTTCGGATTTAGAAAACAAAACATC
TCTCAAATGACGATAGAAAGAGACGAAGAAAAATGGCTGCTGTGGATGTA
CAATTTTCTGAGGCTTTTGAAGCTATTAAGCTGAAGTTTGGTCTTCCTTC
TTTGAGGGAATATCAACTTAAGTTTTTTGAAATTTTTGCTGCAAATCCAA
AACAGGATTTTTTCATTGGTCAGCCGACAGGAAATGGCAAAAGTCTTCTT
TTCCAAGGCTTGCCATTCTTTTTGTCTAAACTTCCACCTCTTGAGGGTGG
TTCATCAACAAGATTGGCCACAATTTCGCTGGTCATTGCCCCACTGACAG
CATTGATTGAAGACCAGATTTCAATTTAAAAAAAGAAAGAGATCATAGCA
AAACGCTTGTCTGAAGACCTGGTAAGTTTGGTGTTGCTGGCTGGGCTGAC
AACCCAGGACAACCCAGGGGTACTAATTACCCTTGCTTGTCGACGGGGTG
CTCCACTGAGGCTCGAAAAATGTGTGAATGATTGACGCTGCCTGCCTGCC
TGCTGGTGCTGTCCGTCCTTCGGAATAGAAGGGTAGCTGATGTTTAGACG
AACCTATCAGACCTGGTAGACAGGGGTAGAAATATACCGTCAACGGCTCT
AACTTGGGACGAGTGGTCATATCATGAGATGGTTGACTTTCTGGTCTGTA
TTGACAACAACTTTGCTTTATATTAGATTTGCGACTATGTTAGTTAGATG
ACTTTGGAGGTTCAGTGAAATGATGGCCGAATTGCTGTCCCAAGTTTTAT
CAGACTGTTGTTAGAGCTGTTGACGGTAGCAAAAGGGGCGAAAAAAGCGA
ACAACAGGGGGTCTTTCTTTTGAAGAGGGGGTCGTAAAACAATTCTTTCT
TTTCTTTACTGATCACATTTCAAATAAATCACAGAGCTGACTAGACCATA
TAATTGCCATTCTATTATCTATTATCATGTGACTTAAAGGTACCTAAACA
AAAGATTAATGAAATTTCCACTTCTTAGCTAAAAGGGCTGAGGTTTCATT
ATTCTCAAAGATTTGGAATACATTTGGTCATAACTTTTCTCAATCATCGT
ATGGACTTTTTGTTTTTGTACAGAGTTTGATTAAAATGAATATTTGAAAA
TACACATTAAATAGATTCAAAAATGGCTTCCATTTTGGATTTATTTGGCC
AAAATTGACTGAAAAATCAAAAATGGCTTATCAGCTTCCCCTACGAAGAC
CAGTAGAACTAATTTAAAATTGCTGAATTTTTTATGAAATTGTTTTCCTT
ATATGAGTTACTAATACAAATATGAGTTACTATACAAAGTTTCAGCCCAA
GTGGCCAAGTACTTCTTCATATGGCAATTTAAGTTTTGGCCGACTTGCGC
TTTTAGGCAGAATGTGCAGTCACCATGGCTGTCTTGACCATATTTTTAGT
CCAAAATTTTTGAATTCATTTCTTAAATAGAATTTTAGGAATGTACATAG
GTTTAGCGGACACAGCAGAGAAAAATTCACTATGCAAGGAGCACCCCGGG
GTGAGGAGGGTTAAAGACCAGTCAGCGATGACACTACAACAACTTTGCAT
CTTATTTTTTGTTATAGAGAAATTTTAAACATATAAAAATTATCATGCAT
GACTTCATGGAAAAGTATCTAACACATAAAAACATTGACAATTAACACAA
ACACGAGATTTACACATTATACACATACACAACTAACAGATAAGTAGTTT
TCATAGATTTAAGTTTTGCATTGTTTACTGTCAACAGTTTCTAATTCCAA
AACTTGTTCAAAAAGATTTTTATTTTCAACTCAAAAAGATGGTTGTAACA
TGGGGCAAGTCTATCTTTTGATATCATCTGCTGTAAGTCTTATTTCTGTT
TAGAAGTTGAGTGAGCTGAATGATGTCCACGTCTTGTTTGTTTCACCTGA
AACCATCCTATCAGATGTTGGGAGAAAGTTTTTGAAAAAGAAAGAATTCA
ATTCAAGATTATCAGCTGTTTTTGTGGATGAAAGTCATTGCATTGAAAAA
TGGTATGAAACTTTTGAAACGTTCTAAGATGAAGGGTACTATGAAGGGGT
ACTTTCACCACCTCTAATGAGCAGGTCAATTCAGAAGGAATCTGTATTTT
AAAAAAATATAAAAAGTGGTGTTTTAATTTTCAGGACCAGAAGTTATTTT
TTAGAGATGATAGTCACCCAAATCCACACTAATTCATTTCTGTTAAAAGA
TAAGAAAAGATCATCCTTTTGACTCCAATTATCTATTAAATTAAGAAAAA
CACTGCACTATTATTGGCCAACTTGATACTTCAGGCGTACAAACTTTCCT
GAGCAGAAACTTAAACTTTCACAGTTTTTGTCAATTTTTCCCTTTTTCCT
AAAAGTTTATGCTCACAAAAGTTTGCACGCTTAAAGTATTGTTATTTTCA
CCACAAAGGGCACCAAGAACAAAATTTTATCAATGATACCTTAAGGGAAC
TAATTTTCGCAGAACTAGTTTTCACGGGAGCTAACTATATTTCGTGTTTT
GGGGTGTCTACCGCGAAAATTAGTTCCACAAAATGGGAAATACTAGAAAT
CCTTAAAAACCCCTAGGAAAATAAAAGAATTTAGGCAAAAAGTGGGTGTC
TACCGCAAAAATTAGTCTCCTTAAGGTATTTTTTTTATTATTTGCTAATT
GAGTCTAAGTCACCATTTTAATTTTCTTACAGGGGTACATCGGACAATCC
AAAAAAGGCTGCTTTTCGTCAGTGTTACTCAAGACTTGCTGAAATTCGGT
CATTTGTGGCTCGTAGATTACCGTTTGTTGCAATGACTGCTACTGCAACC
AAGTCTACGCGTGAATTTATTATTTCCAACCTTCAAATGATTACCCCAGA
GTTGCTAATTATGGCACCTGGAAAGTCTAACATCACTTATTACGTTAAAA
AAACAAAAAATTTAGATTGTGATACTTTATTTGCACCATTGATCAAAAAT
CTAAGAGATAATGGTTACAAAGCAGAGAGGGTCATTATCTTTTGTGACAG
AAGCAGATTAAGAGACCTATATGACTCTTTTGAAAATGAATTCTACAATT
ATTATACGTATGATGAAAGACCATTTGCGATGTTTCATCGCACAACGAGA
CCAGAAATCAAGGAAAGGATAATCAAAGCCTTTCAAGACCCTGATGGTAT
GGTGAGAATTTTGATAGCCACCATAGCATCTTTTGAAAATGAATTCTACA
ATGATTATACGTATGATGAAAGACCATTTGCGATGTTTCATCGCACAACG
AGACCAGAAATCAAGGAAAGGATAATCAAAGCCTTTCAAGACCCTGATGG
TATGGTGAGAATTTTGATAGCCACCATAGCATCTTTTGAAAATGAATTCT
ACAATGATTATACGTATGATGAAAGACCATTTGCGATGTTTCATCGCACA
ACGAGACCAGAAATCAAGGAAAGGATAATCAAAGCCTTTCAAGACCCTGA
TGGTATGGTGAGAATTTTGATAGCCACCATAGCATTTGGAATGGGGATTG
ATTGCAAGGATCTACATCGAATCATTCATTTTGGGGTGCCATCAGATCTT
GATTCATATTTCCAAGAATCTGGTAGAGCAGGAAGAGATGACGCTCAATG
CTCTGCCTTACTACTGCTTTATCCACGCTGCATTTCTCGCTATGTGAAAA
AGGATATTAGAGATTATGTGACAAACACTCAACGTTGTAGGAGAGAAATT
CATCTTGAGGTTTATGATTCAAAACCAAGCAAAATACAACCAAAACATAC
ATGTTGTGACTTTTGTCACCAAAGATGTGAGTGTGGAAATTGTGAATCAC
CTGAATTTTTAGTAGATCTTCTACAATCGAGAGACGAAATCGAACTGCCA
GATAATGAACTTATTAATGATGAAGTAGAAGAACAAGTGGAATGCCGGGA
GGGAGAATCAGAATCGGAACCAGAAATATAGAATGATGAACACTAGAACT
TTACCACATATGATATGTTAGAGGATAAAATATATAACATTTAGTTTTTT
GTATATTTCATTTTAGTTTGATAACAGCCAGTCAACTGTGGTCCTGGCAA
ATATATACATGGGTTGTTAGGTGTCTGTTGCATTTTGTCCATCAACTGTA
GTTTATTTCCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055851TCONS_00055851Clytia hemisphaericatranscript
TCONS_00055850TCONS_00055850Clytia hemisphaericatranscript
TCONS_00055849TCONS_00055849Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055851-proteinTCONS_00055851-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_263supercontigscaffold_263:124857..129168 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.83	0.76	0.31	0.1	1.63	1.25	2.55	2.22	2.41	1.07	2.29	3.13	2.25	2.19	2.01	1.73	2.8	3.13	2.2	1.26	4.2	3.6	1.76	2.14	2.08	2.64	3.13	1.92	2.51	2.1