XLOC_035235 (gene) - C. hemisphaerica

Overview
NameXLOC_035235
Unique NameXLOC_035235
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_266:117022..122331-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035235 ID=XLOC_035235|Name=XLOC_035235|organism=Clytia hemisphaerica|type=gene|length=5310bp|location=Sequence derived from alignment at scaffold_266:117022..122331- (Clytia hemisphaerica)
GTTTCAGGAGAAAAAAACACAAAATAAAAATAGAAAAAAAACACATAGGA TGGAGAATGAAGATGAAGACTTTGCATTGGCTTTGAAACTGTTCACTGAA CTAAATGAGGGCGAAGGAGAGCAATCACAGTCCGTAAAAGGAGGTAAACC TGATGAAAAACTCTCCATCGTTGATCCAAGTTGGGAGTTAATCGATCCTG TACCAAATATTCATGAACTTTTCGTCCAATTCAACGCAGCTTATTTTGAT GGGATGCTGGCTAGTGTATCCGTACAATGGAGCCCAAGGATGACCTTGTA ANCAAACTCTCCATCGTTGATCCAAGTTGGGAGTTAATCGATCCTGTACC AAATGTTCATGAACTTTTCGTCCAATTCAACGCAGCTTATTTTGATGGGA TGCTGGCTAGTGTATCCGTACAATGGAGCCCAAGGATGACCTTGTAAGAT TTGATCAATCTTCCCTTGCTCATTTCTTTTTTTCCCAGATCATTTTTAAT AAGTATAACGGAAAAAACTTTTTATGTGACTGCCACAATGTTTGATTAAA ATTAACAGAGTGGATAGTGTATTTTACGGTGTGCAAACCTATGACATTCT AAGATTTTGAATAATGTCCAACTGATACCGACACAAGGATCTATTTTATC CAAATATGTCGACACGGGACTTGAAATGTTAAGCGAAAATAAAGTTACAT TTACTTTCATTTGTTGTCTGAAAGAGGTTACCTGGTCCAAAGATCCACTT TGAAGCTAATTCCCTTCCTTTGTCTGNGTTTACTTTCATTTGTTGTCTGG AAGAGGTTACCTGGTCCAAAGATCCACTTTGAAGCTAATTCACTTCCTTT GTCTGAAGGTTTCTTCTGACAAAAAGCTCAGTCCTTCTTGAATTTGAGAG TTTTCAACAAAGATAACAAGACCTACATTATCTAAACAAATGAATGTGCT TCTACTTATGGCCAGGTTATGAACAGTACCTCATTTGTCATTCCGTAAAA GTTCGTTGACTTATCGGACGTGTTTAAACGAAAAGCAGTAGGTCAGGTGA CCTACTTAATCTGTTCGGTTTGACGATCCAAATAATCATTATCCTCTACA GAGTATCGCTTTTTTGATGTGGAAACTTTTGAGGTTTTTTGGAAATTGAC GTTTGTCTGGTCGTGGTTTGACCTGGCATCTGGGGAAGCTCTATCTGGGT GTAATGAAGGTTTCAAAATGTGAAATCAATATATGTTTTTAGTGGTTTTC GCACATGTTACTCCCATCTTGCTGACTATACTAATATATTAGTTTTATTA TGTGACTGGAATTTCGCACATGCTTCTTCTATTCTATATTGCTGACTACA ATTTATGTATATATGGCTACAATAATTTTCAAATTACGAAATCATACAGC TTGGATATCATTACTCTCTTAAAGATTTGGCCATTAGAAAATATCTTCTC AGTTATTCATCAGAAAAATGCTTCATCCCTCTTTCCTTAGATGTGCTGGT TTGTGCTACTATGAGCGGCGTGGCAAGTGTTGCTCCANATTTACTTTCAT TTGTTGTCTGAAAGAGGTTACCTGGTCCAAAGATCCACTTTGAAGCTAAT TCCCTTCCTTTGTCTGAAAGTTTCTTTTGACAAAAAGCTCAGTCCTTTTT GAATTTGAGAGTTTCCGACAAAGATAATAAGACCAACATGATCTAAACAA ATAAATGTGCTTCTGTTTATAGCCAGGTTATGAACAGTACCTCATTTGTC ATTCCGTAAAAGTTCGTTGACTTATCAGACGTGTTTAAAGTGGGGGCGTA CGGTTTTTCGGAATTGCGGAAATCGACCCTTTTTTCTTCGGTATTTCGGA ATTCTAAAATTGTTTCGGAATGGAAAATCCATAATTTTTTGCTTCGAAAT TTCGGTATTATAAAGTTTTTATCCCCTTTTTTCGGAATTCATACACGAAA AATCAAATTTGATGAAAAATTAGTCAAAACGAAGAAAAATACCCAAAAAA AATCGGTATCGGAATTGCAAGTACTCTTTTACGGAATTCCGGAAACTTTG GCAAAGTTATTCGGTATTTCGGCAATCGCAAAACCCGTACGCCCCCCCCT TTAAACGAAAAGCAGTAGGTCAGGTGACCTACTTTATTTGTTCATAAATT CGATTGTTGACGATCCAAATAATCATTATCCTCTACAGAGTATCGCTTTT TGATGTGGAAACTTTTGAGGTTTTTTGGAATGCGATGTTTGTCTGGTCGT GGTTTGACCTGCCATCTGGGGAAGCTCTATTTGGGTGTAATGAAGGTTTC AAAATGTGAAACCAATATGTTTTTAGTGGTTTTCGCACATGTTACTCCCA TCTTGCTGACTATACTAATATATTTGTTTTATTATGTGACTGGAATTTCG CACATGCTTCTTCTATTCTATATTGCTGGCTACAATTTATGTATATATGG CTACAATAATTTTCAAATTACGAAATCATACAGCTTGGATATTATTACTC TCTTAAAGATTTGGCCATTAGAAAATATTTTCTCAGTTATTCATCAGAAA AATGCTTCATCCCTCTTTCCTTAGATGTGCTGGTTTGTGCTACTATGAGC GGCGTGGCAAGTGTTGCTCCATCAAATTAAGTGCACCCTTATTGAAACTT CGTCCGCGAAAAGACTTGGTAGAAACACTCCTTGNATCAAATTAAGTGCA CCCTTATTGAAACTTCGTCCGCGAAAAGACTTGGTAGAAACACTCCTTGT AAGAATACTCTCCTTGTACAATTCTTCCTCTGTCGGGATTACTATTCACG GCCATGTCTGTCTCTGAAAACTTATTAAGTGAACGTAGTTAAAACTAAAT TGAAATTGAATTTAATTGAAACCTTTGTTATTAAATTCATTTTCGAAAAG CTGGTAAAATTGTTTTTTACTTTTCAGCATGAAATGATTCACGCTTTACT GTTTGTCACAGATAATAACAAGGTACTGTTCTGTTCTTGTTTATTCGTAT TTCCGGGCGGGGGGGGGGGGGGGGGGGGGGGGCNAATAGCACTTTCTGTT GGTTTCTTTAAAGAAGGTAACACAAATTGGTTTTCCGTTGGTTAATGTTC TAATAAAAACTGTCGTGTCCATTTTCGAAACCTTGCTATCGATTTCGCCC TCGTTAGTTGAATCATAACATGGATCTACATTATGAACAAAATGTCACGC CTATCCCGACCTTATTTCCGTAGATATGAGATGCAGACCATTCTACACTT TTTCACTTTTCTTTTGTAGGATCACGATGGACATGGACCAGAATTTCACA AACACATGTACCGAATCAATAAAGAGACTGGGACCAACATTTCAGTATGA ATCTTTTCATTATGTTGTGTCGACCATCAAAATTTATGCCAATATTTCAG AGATTTTCCATTTTCACGCGCTTTGAAAATTCCTACAGTGTCTTCTTTCG TGATTTAACCAACAATTAGCTTGTGCGGATGCAAAATTGAGTCCAAATTG ATATGACAATCTAAAATATTTGACTTTGATTTCATTTTATCCACTTTTTA GGTTTATCATTCTTTTCACGACGAGGTAAGCAAGATATTTGTTTACTATT TGATCTGGATGTCCNTTATCATTCTTTTCACGACGAGGTAAGCAAGATAT TTGTTTACTATTTGATCTGGATGTCATTCGCCCATTAAAACCTATTGCAT GAACTTCAGTGTGTTTTTTTCAAGCATTGCATCGTAAATTTATTTTCTTT TAGGTGGATCACCATAGACAACATTGGTGGCGTTGTGATGGTCCTTGTGT TAAACGCCCTCCTTTCTTCGGCATCGTCAGGCGTGCTATGAATCGAGCGC CCTCTCCGCGCGACCGCTGGTGGAATGACCACAAACAAAAATGTGGAGGA GCTTTCACGAAAATCAAGGAGCCAGAGAAACCGGTGAAGCAATCTAAGAA AAGTAAAAAGTTAGAAGAAACTGGACAAAAGCTTGGTTCCTCAAGTTCTG AAAGCAACAAAAATAATAAGAATGCAATCACAAACTGGTTTCAGAAAACA GATTCTTCAAAGCTTTCAACCTCGTCTAATTCATCTAACTCCATCAGCAT AGATTGTGAAGAAGATCTGAAACCTCCGATAAACCCGTGGGCAGACGATA GTTACACCAGTAATTCAAAGAACAGTAAACCAACAAGCAAAACTAACTCT AACCCTAAGACAAAAAACAATACTTCGAACCATGGAAACCAAAACAAAGG TAAATACCCAGCAGGTTCAACAGCCGTTAAAGGAGGTGGGTCGCGAACTT CAACTATCACCTCCAAGGGGAAGAACCCTCCGACCAATGAGAATGACATT TATCGGAGCTCCTCCACAGGTGCTTCAAGTAATATCTACGGCTTCAAAAT GTCTGCTAATAACAAAGAAGACTCAGCAAAGCAACCCTTAGCCTCCTTTT CAGGCAACGGCAAACGAATAAGCTCAACAAATGACGAACCTTCGGGAAAC AGTGGACGAGAAAATTTTTTGAAACGATTAGAAAATAACATGAAAGGGAA TACTCAAAGAAAACCCTCAACAAATTCATCACAAATTAGTATCCCTCCCT CTTCAAACACTTTCCGTAAACCAAAAGATTCTGATTTCTCAATGAAAAAC CAAAATAAGGACAGAACTCAAAAGAAAGAAACCACTGAAAAAACTCCTCC GAACCAACCCTCGTTCTCAAGAAATCCTACAACAAACCAAAACAAGTCTC CCTATACTAACAAACAACCACATAACGCACAATCAAATTTAACAAACACT AAACGAAACCTTTCGTCTTCTTCTTCACAAAACTCTTCATCAACCTCACC GAAAAAGACTAAATTTTCGAAAGAAACGCACATGGTTATTTCTTCAGACG AAGAGGACAATGTACAGCAACAACAAAATCTTGTGGATTGCCCTGCGTGT CCTATGAGAGTTCCTGAACATCTTTTGAATGAACACTTGGATGAATGCTT AACTTCTTGACACTTCTACCGATTGAGAAGCTTCAACCCTACCCAGACCG CAATTTTAACGAGTTTTGTACAGTATGTGTTGTTGGGACTTCAGTTATTT TCGGACCCTCATTCTTTCGTTTCAATGTTTTTTTTTAGTTTTTTTAGTCA TTTTTACCAGGGTCATCTTGTATGTAAGATCATCGTTGCCTTACTGCAAG TATGACTCGTTATATTTTGTTTCATTTTTTACTGTGAATTTAGAAAACTG AAAATATTTATTTTTTATCCCAAAATTATATCAACGATTTCATGAATCAT AGAGCCTCGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055983TCONS_00055983Clytia hemisphaericatranscript
TCONS_00055982TCONS_00055982Clytia hemisphaericatranscript
TCONS_00055981TCONS_00055981Clytia hemisphaericatranscript
TCONS_00055980TCONS_00055980Clytia hemisphaericatranscript
TCONS_00055979TCONS_00055979Clytia hemisphaericatranscript
TCONS_00055978TCONS_00055978Clytia hemisphaericatranscript
TCONS_00055977TCONS_00055977Clytia hemisphaericatranscript
TCONS_00055976TCONS_00055976Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055982-proteinTCONS_00055982-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:117022..122331 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
36 33.83 43.15 51.24 8.41 7.13 9.13 5.96 4.84 6.31 14.01 5.48 5.24 8.35 7.33 8.81 9.46 8.29 4.31 2.46 3.81 5.21 28.63 25.75 12.42 9.56 2.49 5.02 20.13 26.15