XLOC_035284 (gene) - C. hemisphaerica

Overview
NameXLOC_035284
Unique NameXLOC_035284
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_267:1799..5533+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035284 ID=XLOC_035284|Name=XLOC_035284|organism=Clytia hemisphaerica|type=gene|length=3735bp|location=Sequence derived from alignment at scaffold_267:1799..5533+ (Clytia hemisphaerica)
cagtcgAATCTTGAAGCGAAACATGGCGTGTCGGGTTTTCACGATGCCCA
AGAAGAACTCGAGAAAGTTTCAACTATGAAAGGTGAACTAGATGAGAAGA
AAGGCAAAACATTGGAAGAAATGTCTCAATTGGTATGCTGACTTtatatt
attttccttttcttttccgGGGGACGAGTTTTGCACAATTGACGATGTTT
TAGGTCAGAGGGATATAGGGGCATATAGAATGGATGGcatcaaaaatatt
aaaatccaGGTTTTATTCTCAAATTTGGTGAGTTAAAAAGTGAACAATGA
ATTGCACCGGGGAGCACTtagtaccgagtttatgtatgtgtgtttttcag
cgacagAGACAGTAAGGTTCaaatttgactagatcatgaccagctgagaa
cgacggtaaatcagcacttttaccgtcctcgattttgcggggcagaactg
cgggttattccaaatcgcttcagtcactttaccgtcctcaaaagtgcaaa
tatataaacTCGCTAGTGGTACGCCGCCTGACAGTGCTGACGGAGGTTTG
GTGATTGCTACCAATGTCGCAATAGATGGTTTTAAGATATTATCTCTGAT
AATGTGGCAATGATAAACAATAATTGTTTTGGAAACGCGTGACAAAATGT
AGACAATTTAGACATGATTGAccattgtttttcattttgcaGGTGGTTCA
ACTAACGAACAGTATCTCAGAGAAGAAGAATTCATTAGCTCCTGTCATCA
AAGAATTGAGACCGTTACGTCAACAAGCTCAGGTAACCCTTTGAAAAGTA
TTTCTTCTTGCTTCCTCTCGAATTTTCTGTCGGTTAAATCATCACATTAC
AGGTACAAAGGATGATCGACACAATTTTCATGAGAAGGATCAATTCTGTT
atgatattttaattttgagtGGCATCAGCAGCATAACGTTGACTACTTTT
TTGGCCACGCATGATAGCACAATAGATAACTATTTTTGAGCTCCTTCTTT
TCTCCATCTTTTTCTTAGACATAAAAGGCTGAGGGGTATATTACCGGAAA
GGATTCTTACAGGTCTTGGTAAATATTTTCGATAGAAATGGAGAAATTGG
TGCTAAATTCATGTGCCAAATTCATCTAGTGCGTCAGTCAATGCTTCTGT
TGAACATGAAATTTCTATTGAGGACGAACTGCAGTAACTCTCGTTTACTT
CCTTAGGAGTTGTCTGTGGAGTACGAAGAACGAAAAGGAACTTATGAAAC
AACTGCTGCTGGCCTCGAAAGCAACATGTCTAAACTTGACCAGGTAAATG
ATCGATGTGTAATACTTTGGAGATTACAATGTTGGATACGGGAATATAAG
ATATAAAAACTTTCTCTTGTAAAGTATTTCAACGCAAAGTAAAAGCAACT
TGTTGGCAAAGGATTTTTTAATCGTTCTCTTAGAACTTCTATAGAACAAG
CAGTTTTTAGGTAGTAAATGAGACCTTTTGTTCGAAATACTAATTTTCTT
CGCTGTAGGAGGTTAAAGCACTTCGCGAAGAGGTTTTGGCGGAAGAAAGT
CGTTACCATTACATGGAATCCATGATCGAGGTATCCTTTCTTTtcttact
ttcatttttatcggTAGGACACATTCAGGGCACGAACTGAAAATCGAAAT
AATCACTATACAGTCGACTCTTTCCAATTCGATCTTCGCAAATATTCTTT
ATTCGaatcaaacaaagattcttaTTATGGTAATGCTTTGACGGCTGACA
GGACCATTCTTTATGGCTTTGATTACGAAGGCTTTTGAATAATGGAGGGT
TGACTGAACGTGCCTTTGACCATGCGAAATTCACTGCAAGGGTCACGTAA
AGATATAGAGGAATGGGCTCTAATTCTAACTTCTTTCACAAAACTTTCCT
TGACTCCTTTCAGTGACTGAGGCAATAAAAACAGTCGTGTTTATTTTGTA
CTCGAAGATCAATTTTACCTTGCCTGTTATAGGTATTGGAGGTCCAACAA
CAGCGTATCGACGAAGAAATTAAATCTTATGTCAACACTGATGGTTCCAA
GAAATCTCTCAGGTAGAATTATTTGTAGCTGTTAAATCAGATTTCATTGG
ACCAAGTAAAGTTTTTTGGTTTAAAATAATTTCCTTGCTGATAGTCGGTT
GATTTTATCGAGCCTCGTTGCCCTAAATTTATGATGGGTGAAAAAATCCT
AACAATAGCTACAACCGCTTTTTTAGTAGCAAATTGTTTGACACGTTGGT
ATCTTCCATCGATTATTTTTATCCTTTAACTTCTCCTACAGGGATAAATA
TTCACAGAGGATTCATGAACAAGAAGTATTGGGAAAGGTCAGTTTGCTTC
TCCTNAAATATTCACAGAGGATTCACGAACAAGAAGTATTGGGAAAGGTC
AGTTTGCTTCTCCTTCCTTCTTTCTTTCTCACTCTCCAAACTTTCGATCC
TTAACTCAAAAGAGTAATTTTTGGCTGAGActcgactgttcttattttca
ggcttaaatgttcttaacattttattcATTAGTTGGTCTAAATTCAATTT
CCGTGGTCATTTTTGAGATTTCCTTTATTTGTCCTTAAGCCAACCATGTC
TTACGAAACCTTTCATTAAAAAAGCTTGTACACCTAACTTTAAATGGTGT
AAATGTTCTTTCCCTTTTGCACTGagctaaaaatgttgaaatggTGTTGG
TGTATTTTGCTGTTATAAGACCAGCGACAGTGCTTATTCATTATTGTTTT
GTTTCAGCAATTACGTGAGAAGCAGAAATATCTCCGAGAAAATCATGCTC
CCAATATGCGCCAAATGAAAATGTGGACTGTAAGTGATATCTAATCTTTA
GATTGATGTAAACTTTATTTCATAAAGATCATGAATCTAACAAAACAAAG
CACAAATCTAGCGAAACATTCCTTACATTCTACAAATAATATAGCTGCTT
TTTTGGTAGTGATCTTTAAACTCATTGCAATTTGTCCATCCAATTATCCT
TAAAATTAATATGTTCGCGAATACCAATTATAAAGGGGTACGCGAAAAAG
GCACACAAATTGGTAGGACTAAGGTATATCGGatggacaaaataaaatga
GTTTCGTAAAAGCCTCTGTGGTTTTCGAAAAGGTCTACATGATTTTGACT
ACTCAAGCATGATGACAAATAAGCACTAGATGACTTCAAACAATGTGCTT
GATCGTATCATCTAACGAGAGTTTCAATGCTCtgttattttcaacttttt
gtttcCAGGATCTGACGCAACTGTTGAAGTGCAAGAAAGAAAGCTTGAGC
GGACCAACAACAAACACGGTTGAAGATCCGGCTCTGTACGATGAACAAGA
CCATctcgttctgtaaaatacatgcACTTGAGGTTTTTAATACAAGGCCA
TCTTGAATTCTTTTATTTCACACGCTATAagacttttttcgaaaaatgac
gACCATACGCTTCTTTTTGTAATCAgtcaaattgtaaattttttttgatt
tcatttttaactgtaaattttttggtttaatttaTATATTGTAACATCAA
GTTTTTGTTCATTGTGCACActataaaagataaaaaaatatatcagcAAA
CAAGATTAAAACGTGTCAGTTCTCACCTGAACGAAGTCTAAacataagca
taaattaaggctgaaaatgagattttgttaAGCATACTcttgggtgccta
ataaacgtacagaccaaaataaacgtacaggaggg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056060TCONS_00056060Clytia hemisphaericatranscript
TCONS_00056061TCONS_00056061Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056061-proteinTCONS_00056061-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_267supercontigscaffold_267:1799..5533 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.88	12.28	8.18	4.56	11.47	9.2	8.81	10.44	15.23	14.21	8.52	10.43	7.08	5.66	3.06	2.7	2.9	3.29	5.15	3.57	4.3	4.33	8.36	7.84	23.17	18.99	3.55	2.41	4.14	4.47