XLOC_035572 (gene) - C. hemisphaerica

Overview


Name	XLOC_035572
Unique Name	XLOC_035572
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_276:684112..693590+

gene from alignment at scaffold_276:684112..693590+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_035572 ID=XLOC_035572|Name=XLOC_035572|organism=Clytia hemisphaerica|type=gene|length=9479bp|location=Sequence derived from alignment at scaffold_276:684112..693590+ (Clytia hemisphaerica)
CGAAAaccaaaattaactttttttaacaaTACGCCATCATTCTACACCCA
AAAACGCCATTCGTCGTTTGGCGAGTTGAATTCGCGTTTGGCGAGTGATT
TTGATAGCAACAACAAAGACGGCGAGTATTttcgcaaagcattgtgggac
gAAAACAACTTTTTAGATTCATTGCGTCACATCTGCagcagttttcaaaa
aaatttgctgCGTCAAGCGACTTGGACCAGCAGAACAAAATACAGAGACA
AGAGAGAAGAATCATTTTATCCACTCTACACTTTCAAAATGAAGTGGGCA
TTCAAGGAAGAACACTCTTTAGGTtagtatatattatatatatatatatt
tctcCTGTTTCAACCACTTTCATCTGAGTCTGCTTAGTTTCAGTCGTTGC
AGTAATTTGCAAACACAGAAGTGTCTGTTTAGGGGGGTCAATGGAGAAAA
GGTTTAGGTTGATTGTATGTTATAATACTGGTGCACACTTGATTAGTATT
TTCGCCTTTGTGTGTTACATTTTCTAGAGGTGTAAAATTGACAGGAAATT
GCAGGATTTTGAGCCATTAATGGTCTCATTTTCCTGATAATGTATacata
ttgggccattccagaatttggcATCAGGggcagggctcgaaataacggtc
ggacaccggatattgtccgacccaaatggCTTCATGCctgacccaaaaat
cataattttcaagctaaagcaaccctgatcggacattttgtccgacccac
ttgaaatcgtaATTTCGAGCCTTGCAGGGGGGACTGACGACACGGGACTT
CCGAggcacgtgcgtttggtttgggaatgcgaaacacgaacgcaaactac
ccatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNaaaagatatagtcaaatcttgtagggtcat
ttttcaaaaattttttgccaaattcgattttcgcatttcgccattttacc
ctacgcaaacgcacgtggagggcaaaagttttcaccaaaattcaaaattt
ccaaggcgagagaagaatccaaaacagtaaaaaagagtggaatatCTGAC
ACATTTTGCGAAAGTACATGGATTTCCATCAGAATTTCTGACCACCACtg
ggaaaaaaattatttcagaggctagaaaaaaattaaaaatgtacgTCGTG
CTGTGAAGTCGGGtagcttgcatcagtggaggctaacctgcatagccctc
aaatgacctggctggtccttaaaatacaaagttaaatcaaaacaaaaatg
gtagaatagagccagacaatctcaatcgaacggaatcgacgatcgaacaa
atcgaacgcaatcgacccattgaaattcgattgtcgaacgcgatcgaatc
tcaatcgaacgtcaaaattctgggtaatattcgattggttcgattgttgt
tcgactggttcgatcgtcaattccgttcaattgagatcgtctggctttag
tcttgcagcttcccaacatccaagctctcaaacatcacaagccgaatgaa
attacttttgttttcccgtagaaattatgcgatgaacaatccgggggtca
atgaatcgatgatcgaacgcaatcgaacatcaatcgaacgcgatcgaata
tcaatcaaatctgaaaattgcggtaatattcNATGCTATAtcatctcata
aaaccagatgtttttcaattttgaattgattttggtgagttcccccccat
gcctagaatgaaaattttccattcccccctcCCTCTTTCCCCCcccctgg
cttcaaaaaaaattctttcccccctatacgtccttttgacctcaaaaccc
attccccccctgaatccaggggggggaggacactatggggggtcaatgaa
tcgacgatggAATGCAATccaacgcaatcgaacatcaatcaaacgcaatc
gaatatcaatcgaatctgaaaattgcggtaatattcgattgagattcgat
tgcgttcgacaatcgaatttcaagcggtcgattgcgttcgatttggatcg
actggttcgatcgtcgattccgttcgattgattgagatcgtctggatagA
GCTGCCAGCGAAGCTGCAtaagttcatttgttttgaaatttttatttgaa
ttttattcaaTTCCATCCATCCCATCCTACGCTTCACCCACCatctttat
tttaattttgagcACACAagaattgaatttcaaaataaaacggaTATAAT
ATCCAACCCTTTCTTACCGTGAGTggatcagtggaggctaacatgcattg
ccctcaaatgaatgacctggctggtcattaaaattttttcattaatattc
taccatttttatttttatttaactttgtattttaatgaccagccaggaca
tttatttgagggctatgcatgttagcctccactgatgcaagttacccgat
ctcaccaTATGAGTTTGCAGGACGTGTTATCTCCCTAGTCACAAAAACAA
AGATACcacatttgaaaaaaagaggGATCGTATCGTAAAATCCAAGGGTC
GCAGAGACAGACTGTCTACATAATCACGGCAAAACACCCTgccatttatt
tttaatttccgATAGATTTGATTTCTGAAAAGTTTTTGGTGATTACCGAC
TCACAGACTCACTTTTTGGAGCCGAAaatgatttttgtgattttttttgc
aaataatgctacaatccttcaagaaatatttgagacaaatgggaaatttc
ccaggaagttttgaaaccaccatcgatttgtaagtgctctaaagtaggtt
cgaagggtagagttttaactctgagttttaacgctagacttaagacctta
ggatctttgGATCCGAAAGTTCAATAATGGTCTAGTAAGGCtccgaatat
agcctggaagtctgcctacccgtctcaaattgaaatattcgattcaatta
aagagatagcccaaaatcggctttttcgcccgaactttaaatctcgaaaa
acgTCAACATAACCGGAATTtcaatatatttcttgaaagattgtagaaat
gacaatGAAGTTTGGATGATACTTaagaatactatccactgatgaacTGT
GGCACTATGGTAAAGCTATGATCCATCTGTGTGTACTCTTTGCTTAAGAA
AATGATTCACATTGAGTTTTTTCACCTGTTGGGGAGTTCGGGGGCCCAAG
CCTCAAACCAAGTGTGCtgctttttaataatttcaatttacacTTGCATG
CTGTAGATCATTTTGACTCAATTCAGCATACTAAATTACTACAACTATTC
AGACTGGAAATTATCCGCTCCGTTTAGTTATGCAATATACCATCACGTTT
GCCTAAGGAGTATTctattttgagaattttctcTTCTTACCACTACTGTA
ACCCCTGGCCTAAGCTATACCAtatgtttgattgagattcaatcATGTTT
AACATGTCTTGTTTGATGAAAACTGATTGGAACAACAACAACACTGATTG
CAGTGGACCATCAATTGAAAACAGCTGAATTACTACTAgaatttccctaa
attttccCGTTGTAACTCTCTTGCCTTGGGTATTCAAATCTAACTCAACG
CATCTCAATCATTTGGTTTGATCACAGTATTCATTCAATTTAGAGCTGGT
AGTGTCTGGTTATTTATTTTCAGGGTAAACATGAACATATATGAGACAGG
TGGATTTGCACTTCAGAAATATAGGCTTTGATATGAATCTAAAAGCAACA
ACTTGATGGATTTTACCATTTTTATCTAAAtcttttaaatattcttttcc
TCTGTTCCACAGATAGCCGAACATCCGAATCATCAAAAATAAGAGCAAAA
TACCCTGACAGAATTCCagtaagtttttttcttcttaattttattaattt
attgttaaAAAGCACAGTGCTTGAAAGATTTCTAATAATTTGAGCTCATT
ATTCATTTAAATAAGatttgatttgagaaagcaGCATGTAGGAAGTTATA
GAAAATATTAATTGTTTCCTTTATCTAATTAACTAACTTCATTATGCAGT
GTTGACAGGTTCCAAAAGGTTGGATAACATTTTGGGAttggattttgaat
tttataattttttcctgtctCAAATACCACTTTCTCAGTTGGAAAAGACT
ATTTCTGCACATTTCTgaaagagcaaaaaaaacatatctttGTCATATGA
TAACagtttcgttttcaaaacatgTTTAATTAAGAAAACGGAAAACAAAG
CAAGAAAATTAATAGTTCGAACTAGCCAATATAATTCAATTTGTTCAGTA
TTCAAAGGTGttgaatattattttgaaatagcttttaTTGAAGGTGTCAA
AGCATTCTTTCTGTATGGTTTTGACACTCTTTAAAATCATAGGTAATcag
agttttttgttttttttaaacagtCTAGAATCATACTGAGTGTTTAATGG
AAAAACAtgattctgaaaaaaaagaaattgccttCACTTTTTTCCTTGTC
ATCAAGTTAGCCCTTCTTAGCTTTCACCAACTAAATACATTAAATCCCAA
TTaaaatgtataactttttttacacAGGTCGTTGTAGAGAAAGCTCCGCG
ATCAACTATTCAAGATATCGACAAGAGGAAGTTCCTCGTCCCTTCAGACC
TTACTGGTATGTTGGTTACACTTTTTCCATTTTGCCCTCGAATATAATAG
CAAAAATATAATCATAACCTCAAGTTGCAGTTTTATATACCgctttatcg
gcgatccaaaaaatatcagcaatctgattggttaaaaagagtacaatata
tcttatattttacatgtaaaaatataaattgacgaaaagatgttgtNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacatt
tgctcgtacaatatggaaatattttactcgttccggattttccgtatatt
ttcctcgcctaaaggctcggaaaatattgtacggaataatctcggaactc
gtaaaatatttctcatattgtactcgcaactgtccgataactattacgta
tTTACAGTCAGGGTTGAGAAAAATATAGGTCTATATTCAGGATTCTATTT
AGATATCCCGATCAACGACTTATGTCTGATTTCATTTCCTGTTCTTGAAA
ATATTATCTATTAAAACATTCTGAGCTGTGTTATCTGTATTATCTCATCC
atgattttgatctttttttcccTTATTATTTCAGTTGCACAATTCATGTA
CATTATTCGAAAACGCATCCAGCTTCCACCTGAGAAAGCTATGTTTTTAT
TCGTTAACAAAGTTCTACCAGCAACGAGGTAAGCCTGGACaagttttagt
tttgttttaattttgttcGTTTTTCTGGAGAAAATTTCAGTATCTCTAAA
TAGTTTTATTTTAGATGACCCTAATaaaaattcgatatttattaTTGGAT
TAACTTGCTTAGCTTCAGCTGATAAGCTTGATGAAGACATATCAtacccc
cccctttcttaaggggggatgacaccttccaaaaaagtgaagaaggggga
tcagaaattttcattgaaaagggggggggtagcaaggaggggggatcgtt
taagaagggggggggggcttacatataattgtagattattttccagcact
gttatgaaatttggtctgcatgaaaggaagttctttattttcactaaaaa
gtggtatatATATTGTATATTTGGTatatatttgccagacttaatttttc
tttactNgatatattgtagattattttccagcactgttatgaaatttggt
ctgcatgaaaggaagttctttattttcactaaaaagtggtattatatttg
ccagacctaatttttctttactgtttcccttccctttttaccatagaaaa
tttagcccaaaacccttgggggataggcatttttaaaggttggggggtca
tttaagaagggggggtcagacccctttccgcactatgcaTATTTCAACTG
CTTACGTGAGCTTGTTTGCTCAACTAGGAATTCCCCCATTTACGAGGGAA
ATTCCATCCGTTCATGTGTCAACGTCAGCGAAAGAATTGAATACTACAAC
AATCAGCAAGTATCGTACATGAATTGTGATTGAACACTGATGGACATTGA
GCTCATTGTATTGTTGGGTTTAGTTTAGTGACTGCTATTTCTGTGTTGAT
AATTCTCTTTGTTTACATGATTGCTTgggtaatcaaatttgtttgGCTTC
GTGCGCTGAAATACGTGTTCGTTATTTGTGTCAACGTCCTATTCATGATT
TGTTATTGATGTATTTTGCTTGTTCACATTTTTGAGATTCCCTTTATGAC
TATACCATATGTTCAACATGCGGCTTGTTGATCAGTGCGGTGTTGTCGAT
TTCATAGATATTCGGAAAAGAAAGATTTGGTTATtgaagaaaattaaaga
aagtcGCTGAGAGGGACTTTGGCGCGAAAAGTGGCTATCATTAGAGACTT
GTAAAGAACTTTCgaaacattgaaaaaatcaagtatGTCAAGTATGTCAT
ACCTAGCACTCTTTTCCTTTTTATCCTAAGCGCATCCCctcgaaaaaaat
aacgaaTCGATAAGTCAAATCAAGGAACTTAGTTCCTTTCTTAGTTAAAT
GCATTGGacttaaaatgaaaaagttttaatgtatttaatttttttttata
tagcGCCACCATGGGAGCTATTTATGAAGAACACAAAGACGAAGATGGCT
TTTTATACATCGCTTACAGCGGTGAAAACACCTTTGGAATGTAAACAAAT
CGCTTGTACCACTGGTCATGTATCATAACTCAACAATCCCAAAAGCTATA
TTtgttgttttgagaaaaaaaaattaccaactTAAATACAtttgtttgat
attttattttgcttttggTTCTCATACCGCCTTTATGACTgcggatgaaa
aaaaaatcttgtaaaaaatatttttttttgttatttttattgttaatttA
TATACTTGGAGAAAAATTTTACGGTATTATTAGGATTTCTAGATTTAAAA
AGTATCGTAAAATTTATGTTATAGGAGGTAATCAGagaaaagtaacaaaa
ataaagtttgacCCGAAAATTGAATACAGCATTGACGTAACTGTTTCGAA
ATTTGGATAGAATTGACAAATCCAAAGATATCGTTAATAAAAAGGagact
tttgtttttgtttgtttttctctgaTGACCTTACTCTTGCCTTGTAACAC
AACACTTTCGTCAACACACCAAAAAttgtagtaatatttttttgtcttgA
ACACGTGCGCACGCAGAAACTTgtcaaataataaaatggtTTTGTTTTGT
CATGATCCTTTAAACTCGTTTTTATGAtggttttttatttaaaatgatCC
TTGGTTACGTTAATAATACCAAaatgcaatagttttgacaaattttgaat
gcacttcactttcttttttacGTGTGCAATGTAAACGTagctttaaaata
ttcaataccttgtaaatacagatttaaaaaaagtttgataaaaaaatttg
acgttttaTGTTCAATGCTTATTAGCTGTACCTAACTACTGAGAGAAAGG
AAATAAAATTACTGAAAATCACAAACCAT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00056447	TCONS_00056447	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00056447-protein	TCONS_00056447-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_276	supercontig	scaffold_276:684112..693590 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
275.43	289.43	406.58	441.5	244.69	186.5	252.41	277.9	217.53	176.22	189.44	173.97	158.65	145.92	94.61	110.21	178.62	204.61	141.72	146.62	206.51	196.58	146.96	162.4	254.59	218.47	110.3	103.96	103.91	95.36

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XLOC_035572 (gene) - C. hemisphaerica