XLOC_036129 (gene) - C. hemisphaerica

Overview
NameXLOC_036129
Unique NameXLOC_036129
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_288:593035..601090+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036129 ID=XLOC_036129|Name=XLOC_036129|organism=Clytia hemisphaerica|type=gene|length=8056bp|location=Sequence derived from alignment at scaffold_288:593035..601090+ (Clytia hemisphaerica)
CGTAATCTCAACAGGgcgcaaaatgtaaacaaagctctactttcattttt
atagacAAGTTTGTGGTGGAAGTTCCATCTTATCAGCCTTTCTATTACTT
TTAAAAAGTAATCTGTTCTTCTGTTCTACTCGTTCAAAGTTGTTCATCTA
GTTATTTATAATTTGCAAGATGGAAGAAGTTTTCAAATCGTTTTGTTCTT
TTGGAGCCGGAAAAGATGGAGCAGCTCTCATGGATAATTCCAAATTTGCA
AAACTTGCACGAGATTTAAAACTTTTGGACAAAAAGCTCACTGCAACAGA
TGTTGATATTATTTTCAATCGAACTGAAGTTAAACCGTATGTATTTAGTA
TACTCTTTCTTACTCAATAATTGTTTTCTGCCAGTTGCCCAACAGAAACG
TTTTTCCTTGGTTCTGTCGTCATCTTTTTGTGGTTTTTCTACATCCAACT
GCTGATGCATAAGCATAAGGTTTACTGTATTCTAACATAACTAATCCTTT
ATTTTGGAAAGTTACTTATCACTCTACTAACCTATTTCAGAAAAACTGAG
CGCAAAATAAACTTCAAGCAATTCAAAGCTGCTGTCAAATTATTGGCCGA
GAAGAAATATCCTGGAGATGCTGATGGTGCATCAAAACTTGAAGAACTGA
TTGCTGCAGGCAAACCAACTGCTAAGGGAGCAACTGTGAGTAAACATCAT
TTGTGAATGGCATTAAGATTAAATAATATATACAGTGAAGAATATAGTTG
TTTGTGGGATGGGAGAATGTTATCAACAATATTACTATAGcataaatttt
gttaaaattataaCTATACGTCTTTTACAACTGTTACCTACCGCCAGACG
ATCTCAAGCAAACAgaatcgacaatcgaaccagtctaaccaaatcgaacg
caatcgaccgattgaaattcgattgtcgaatctcaatcgaacgtcaaaat
tatgGGTAATgatattcgattggtttgattgttgttcgactggtttgatc
gtcgattccgttcgattaagatcgtctggctttattcttgcagcttccca
acatccaagctttTGCGTtcaacaatagaatttcaatcggtcgattgcgt
tcgatatggttcgactggttcgatcatcgattccgttcgattgagatcgt
ctggctaccgtaagttggtctaatgttgacatccctcttctaatttcgac
atccttctttaaagataggaatgataggaaggttggaatcgcggattgaa
actaatttttttgctaagttatcagttgaggagtccatcagtgattccga
cctttctatcattcctatctttaaagaaggatgtcgaaattagaagaggg
atgtcgatattagaccaatttacggtaggcagttagtcacactaggaaat
taagctttcagaaaaaaacaacatcagtcatctacaggatgcattcatga
tattcatgatgtaatcttttcgttgattgacactctgaatcaaaacattt
ggccgccattattggtggcaaaacaAATGCGTTCCCCAATGTTTTCCAAG
CAAGGACCCccggaaaaaataagaaaagattaaTACAGANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNATACAAAATAGGTTAGCGGGACAATtt
ttttgccaccaataatggcggcAAAGTTGTTACGTCACATCTATTGTTTA
GGcgcaaagattacatcatgaatttgcaacaacaaggatgagagtttacc
tgaatcaagtttgcaagacaattaattaaaacttgaaagtttgaaacaaa
ataaaacgtgcagcagccaaaatcaaccaaccaaaatttgtcattcaaat
CTCGAAACAGTGCTTCGATTCTTAAGGCCTTGTTtgtacgctaaagtaaa
aacaattccgaacatgtaaatgggtcagtgtttgaggtccggcaaaattt
ccaggaaatagcctatctggcatagcgcggatctaggtgggttccgtctc
cccgtagatcttttttttgggaagttgatcttcaaattagttctcaaggt
tagcttggctcaaattttttaatctatggctcaaattttaggcaatttct
catagtttttaaaaatattaatttcattaaaaagcaccgggttatttttt
catgaattcctttagaagttttgcggcacatttttttgcttgaaaatcaG
GTAGACAacatagcgctttcgcagcattaatctttgatatgcattttggc
gggacgctagtgtgactaactgctagggacaagataatttatcttgTTTG
TACTGGCCGAGGGAAAGTGATGTATACTGGAATAATTTGTTATGCAAAAG
ACTGTTGTGTTCTCCTAACATATTTTGTAAACAATATATTATCCTGTGGC
TTTATGTCAAATTCTGTATTGTCTTTCCTAGAAATTACACATAGGAATAG
TATTATCTCAtcatatctttatttttcagaaagCAGTAAAAGGTGGAGCT
GTTGATAGACTAACAGATACAAGCAAATACACTGGAAGTCACAAAGAACG
CTTCGATGAATCAGGAAAGGGCAAAGGCCTTGATGGGCGTAGAGAGATGG
ATAAGAAAGCATCTGAGGGATATGTTGGCGGTTATCAAGGAATGGATACC
TATGATAAATCTCACTGATTAAATGTAAAAGGAATGTAATATTCGTTTAG
CAATGAACTAGCTCTTTAGTTCTGCTTTTGAAGTagtcaaaattgtattt
ttttagatGCATTTTTTTATCAGTTTTGGAGGTTATTCCCGAGGTGGTAC
TACCCTTGCCACTCACAGGGGTGTGCTGCTGAAGTTTGAAAAATAGGaac
cttttttttaaagtggccctgaatgggactgaaacttgcaaatgttctca
aaattttctacttttctccCAAAATCCCCCAAAAAGATATCCTAcaaggg
actgatttttctattttggtgtttttgcgaccccaTCTGGGACTGATGGA
CTGttggtgaaaaaaggtaccctgaccagtggAACATTCCCGTACCCTAT
TATTGATATCTTTCCTTTTTACAAGCTTCCCTTCTCTCTCTTTTAAATGT
AGATTTtcctcatttcaatttttttatgcaaTAAAAGCCCCAAACAAATC
GTTTCTTTATTACTATATATTTCTTGTTTGATTTTTAAACACAAAGAATG
AATAAATAGCTTTGGAATCCATTTTTGACATTTAAAAGATTTCAGAATTA
TCTATTTTTATGAAATCTAAGCTATCATCTGGCTTACAATACTAATATGT
TGTTTCTATTGACTTTCTTTATCAATGATTAATGACAGTTTAGCTTTACT
ATGAATGATAAAAATCGTTTTATAATCTCTTCTCTTCGCTTTATTTATTC
AGGGTCAGATTAGACCATATCTATTTGAAATAAAGACCTCCTCCACAGAG
GCTCACTTCATGCTTGACATTCTAGCCCGGGTTAAAAAAATGCCGTCTAT
AATTCTAACATTCCAATACTATTTTTTATTCTTACTTAATTTAGATATTA
CTAACTCTTTTAAAGTGTGGATTTCtgttttttatctgaaaaatgtttta
atataTTATTGTACACTTATTGatggaatataattttagaatatttttgg
gTGTAATGTTCTCAGTCACTTGTAATTTTCATCATTAGATTTAGTTTTTA
TCACTAATTTTTATGcagaataaaaaagatttttgcatcaaatttcatcg
aatattttcCTAATCAAGTACTGTCAAAGGTCTGGACAAAGTTCAAACGT
TCATAATAGATATATCacaccatagtcattataaaaaaacactggtctgg
caatgtattgttttagctttattatcgaattttcttttgttataaataaa
aggcaagttgcgatttgcatactttttgatcacgttaccaaattctcctt
ttgggattggtctaaatttcaatcacatgatcaaaaagtatgcaaaataa
atcgatttgcGAACACAAGCTCTAACtgttaacaatagaaagaaacaata
gccttccagaccggggttttttataatgactatgatcaCACTAATTACTA
CTGCTAATTACATATCAATTACTTAGTAAGAAATGCATTACATTTGGTTA
CACTAAAAGGAATTCTAACAACTTAgataattattttgataatagttttt
atttgtttgttgaAATGCAGAACCTCTCTGTAagggggttggtctaaaaa
gcagggtagccaatggggtcgccaattgggctaggttatggggtacctct
ttttgcctaaacttttgaaatctgaaacctgtttaatgtggaaataacta
ttacaacatcttgttaatgattccatgtgataacatttaagattcctttc
gaacttcagtcacaatagccttttttccaaaggtactgaactttgttact
tctcaagagacctggcgccgtTTTGTCctccttcttggcttcgtttgaaa
atttacagacccgaataaataatatatacaaaacagtttttaatatttta
gatttagattttatttatgtttttaattNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcaatcaga
ttcatgctccctggtcagtaaaatgtggttctatgcatccattttcggta
tttctattctggtctgtaaaatatttaggtaccccacaacccattggcta
ccccaattggctaccctgctttttagaccaaccctctGTGAGGTTCTATG
GAAATTATTTAAGATTCTCGTAAAACAATAAAACTCTttaggatttttga
aaattatgaaaattatgaaaattccaaaatattgatttttttcagtaaac
GAACAAGAAAAATTCGATATGAACAGTTCATGTTGGCATTGCAATACATG
GCAAGCAGGAAATATCCAGGTGATGAAGAAGGGTTCCAGAAACTCCAGCA
AGTCATTTTGAAAGGTTGTGGACCAAAAGAAGTCAAAACCACTGTAGGGA
TATGATTTTTATGTTATTTCTAAACTGTGGGTAAAATAACGATTCATAAT
ACCATAGACATATGAACTGTTCATATGTCTATGAATGATAATACTTTACT
TTGGGAGCCATAAGTCAAATGAGTGGGGATAATTGGAACATTGataaaaa
cttcaaattttatttaaaaatgtacggaaaattaaaaatattcattttaa
aatcaaaaatatattcaatgaAGTAGTTTTTTTAAGCCATTGGTATCGTT
TTCATAGACAAAACTTCAATCATGTTGTATGAATAAGAAAAATAGGCATC
TCAGGAAGATCTTCGGTGTAGCATGGAGACCAtataatgaatttttattt
tttcatcttagAAATCAACCAACAAAGATGTCGTTGGCCGATTAACTGAT
ACCACAAAATACACTGGATCTCATCGCGAACGTTTTGACGAAGATGGAAC
AGGTAAAGGATTGGGTGGACGGTACGCCACTGACGCCACAACTCAAAACG
CACTGTCTGGTTATGTTGGGGCGTATAAAGGAAAAGATACATATGATGAG
GTGCATTgattgaatatttttcaagttacgTTTTTCACTTGTTGCGCTGA
TTAATAGATTAGATTTGCGAGACGTTtatagaattatttttttcatggtG
ATTTGGGATCCATAAAATCATCGTAAAGTTCACATAAAATATACGCTAGG
cacaagaaaaacttttttgattaagAATTATTGGGCTTAAACGTCATGTG
AGACATTAACTCCTAGGATGAGATCAATTGGATCAGGTGTTTGACGGGTC
AACCGGTCCTAAAGTTCTAACCCTAAAAAATGAATCAGGAGGTTGGATGG
AATTCGTTAGAATAAgctaacagatcatccattctgcgcatacCAAACTC
TGCTCTATATAGGGATATGTAATTAGATTGATCTTATCGAGTTGATTTTG
aatgcacgcttttttataaaaatatactttataagaatatttatgatgaa
attagccaaaaaattaaaaatatcctaAGAATATCACTATCATGGATTAT
TGGCAACGAAACCtgagaatgccatttttagagcacgTTACTGATAAATT
GCCAATTGCCAGCAATACTAAAAAGTTTCACAAAAGTGCCAAATCTTTGC
TCAAGGTGTATTACATGCTACATTTTGGCTAGGATTGGAtccaaacctaa
gaataccgtaagaatatttcaagatgatttttcctcaaaaagttaagaat
atttaagcGTGTAGAACAAAGGAagctatttttcatttattgggTGAcgg
tcgaaattattttttacctatTGTATATAACAAATCCTAATTATTTAttg
gaaattatttttaaacagatatattttatcatattttatcaGAGAAAGCG
TTTGTATCAttgtcaaattaatttttttaattcgttcattcaatatattt
cattttcaaaaaaataaacatctttcttctaaaaatattacaatagattt
ttaaattgaatcGTGCGTATTACGTCCAcaattttccataaattattaaa
aatttacaattttgtttATGGAATAAATTATtactacaaaaaaataaagc
ataaaataaataattagCCGTCAGTAAAACAACTtgtttttaattgaaaa
agtaaatttttcgaGCTTCAAATTAAACTGTTTTCGAAATTTCGTtctca
attttatcaaaatatttaggaattttcgacgaaaatattttcgaatcCAA
GTTTTCTAGAAATATACCTATTTTCACAACATATAATTttctatttaaaa
atatttttcttcgtcTTCGAGACATTCTTTTTCATGAAGTATGTTTCAAA
CTACCAAAGTCTGTAATTATAATAATGTCGTTTGAGTACAAAAAATGTTC
AGTTCATATAAAAAAGCGTTCTTTCCAAATGGGTCATTCATTCCCTTCAT
CGATACAATTTCGATAGATTCTCGATTAGCTTCGATTGGTCAAGTACCTT
TTTCATTCGTCTTTCATACGTGTTTCGAACCACTCGTTTGCCGTCACTTT
CGTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057334TCONS_00057334Clytia hemisphaericatranscript
TCONS_00057335TCONS_00057335Clytia hemisphaericatranscript
TCONS_00057336TCONS_00057336Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057334-proteinTCONS_00057334-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:593035..601090 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TPPP3tubulin polymerization-promoting protein family member 3 Homo Sapiens
TPPP2PREDICTED: tubulin polymerization-promoting protein family member 2 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.44	3.13	12.82	15.29	132.4	102.29	185.5	199.05	141.26	161.27	80.9	101.43	37.64	31.86	18.56	17.65	16.52	17.86	39.71	39.24	21.66	21.63	13.28	15.79	34.09	39.51	24.69	21.13	7.94	7.96