XLOC_036252 (gene) - C. hemisphaerica

Overview
NameXLOC_036252
Unique NameXLOC_036252
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_291:114476..121056+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036252 ID=XLOC_036252|Name=XLOC_036252|organism=Clytia hemisphaerica|type=gene|length=6581bp|location=Sequence derived from alignment at scaffold_291:114476..121056+ (Clytia hemisphaerica)
ATAATCCATTTATAGGcctgcaaaaataaagtaataaaagcaattgacat tttaatgatgtcTAATTTCATAACTGGTCACTATGGAGAAATATTGACCG GCCACGTGACATTAATCATCCAAccagttttcttaaaaatgattgacagt tgtattgcagggctataaagtactttaatgggataaactttcgcggggac ttaatttcacgGATGGCGCTATTGGGTGggaatattttcacgattttgNA GAAGTCATACTGGAGTACATTCTTCACCAAAAACAAGCCAAcaacaagaa aatgaaagcCTATGAAAAACAGGTACTTTAATAGTTTTCTCCTGGGTCAG TCCCCCAGAAATTCTAGACGACCCGATTGTCAAATCCCacccctgaaaat gaaaaaaaatcgttttcacACGCCTTTTGTGTTTTCCCTCCCAGAAATGT ttaaatccccccccccctcttcaCGACCTGGATCCGGGCAATTAATTTTT ATGCAGCTTATATTTTAAATTGCACACCAAAatgtagttttgaaaaaatt tcaccacaagagaaaaaaaattagattgcCAATATCTaaataaaatgctt tttttgaattttatttacaaGAAATGTAAATGATAttcacgctttttctt ttataagaataacttctataagaatatcagggtgagatttcgggtttaaa acaataggccgaTTGTTtcgaacaatagaaaaataagaataatgctcacc ctcaaccaaagtacactattcttataaaaaaaagcgtgtactgttttctg atttctgttaaaagttgaaaagttttttccCCAGAAAGATTTTGTTGCAC CTTTTTAAACCCCCCCTGGACTTCCATTTTTccttttgccccccccccct ttttggaaatttttttgaaaaaatccccCCAgctaaaaggggggggggga gaaaaCTAAGCttttccttttcaaattttcttaactgCTGATgtgacttt gaaaaaaaaagccatgttcttttattatttgcagggtgtctacgggacct tgaaaaccttgaaaatgaaccacccaaccttgaaaaccttgaaaactatc aattttctgggaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttgtttgacatattttg agttttatttagaaatatttcgcggatgaggcccttccaaatttccattg ggatttaatttcgcggattttcgcggatgacacccaagtCCGCGAAatac gcgaaatttaatccccgcgaaagtttatcccattaaagtatgttATTCCA TTAATAACAGCTACACATGACATTTTATagctaaaatgtaaaaaagcctT TGTACCTCATTTTAGGAAAGTTTTGAGCATCATATTTACCCACATTACTG GGAAATCCTATTTCATAAACAGGGTAACGTGTGTTTTTGTTGTAAGTTTT CCTGATATTGTCACTTTCACccgatttcagatttttaaaaagaaaataaa aaaaacttaaaacatcaattttatttttattttatttccatcctcctgtc caaaacttttcctcataatgtccgtaaaccagaaaataaaaaagtaattg ccttaaTAGCAGTATTTCATCTTttcttaaaaactttgaaacataATATG ATTATTAAATCATCTTCTCTCTcgtaaaaaataacaataagaaaaaacaa caacataatATGACACGCCATGGTAAAAATTGTACGGCAGGTGCTGTGTA CACATATCATGAAAAGCAGAAAGACACCAAACAATCAGGATGGGGTTCGC AACAAGCTCGATACAGTAAAGACTCCATCAAAGATTTTGACTGCTGCTCA TTGACTCTTCAGCCCTGCAAGGACCCAGTAGTGACAAAAGAAGGCCACCT GTATGAGAGAGAAGTCATACTGGAGTACATTCTTCACCAAAAACAAGCCA AcaacaagaaaatgaaagcCTATGAAAAACAGGTACTTTAATAGTTTTCT CTTGGGTCAGTCCCCCAGAAATTCTAGACGACCCGGTTGTCAAATCCCac ccctgaaaatgaaaaaaaatcgttttcacACGCCTTTTGTGTTTTCCCTC CCAGAAATGTTGAAATCCCCCCcccttttcggcccaggtccAGGGGACcg ttcggggacccccgttcggtgtccgggaggccccgaaatNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNtctacgggaccttgaaaaccttgaaaatgaaccac ccaaccttgaaaaccttgaaaactatcaattttctgggaaaaaccttgaa aaccttgaaaaatcgctaaaaatcttgaaaagcaCTTCTTTATCATACAA TCTTTTCAACAGGGCAGTGGTTGAGTGTAGGTTTTTCTCTAGAATTGCAA ATTGAGGTATCTTGCCGGACATCCCTCTACCATGATTTTTCCGATTTAGA GtaatctgaaaaattaagaacgcatttttaagaacatttcagctGAAAAA TGCTAAGGAAATAAGCACATACAGGCTCAGCAAAGTTTTAactgttttaa taaaaaaaaacgtgtacttcatTAAATCATGTAAAAATATCTCTATAAAA TTGCCTTTTGATTGATGGGTTGAAGCCATTGCATAAGGGTGACCGGACTG AATTTTCTATagaatttcctaaggggggtctgaattttcaaatgtatttT CTAAGGGGTTACCACCTAGGGATTCTCCCAATGTATTACAAGGTTTTCAG TACAACTAACCAAAGACAAAATGGAATTTTTAATACACTAATTTTGCACT GATTTTTTGCCTGACCACTTTTTCTGCCCACCCTGTATGGCTCATATGGC TAAAGGATATAAAAGTTATTTCTTATATCTATTAGCCTTTGAATATTTGT TTTTCACGATGTCTGCTAGTTGTATCTTACAAACCTATCTGAGAGCCATG TCAActgagtatcaaaaaaccttgaaaaatgtcaacattttttgccaaaa agactttaaaaaccacttaaaaatgatcaaaacaaccttgaaaaccttga aaatcccgAAAGAAAATCTATACTTCTTTAAACATTGATCCTGAGGAGGG AAATATAATTAGAAAATACCTCGTTGGATGAATAattggaaaatgaagat gaaaaatgagcATGAAAGAAAATCTTTTCCGAAGACCCTTTTTACTTTGG CTAAAAATAAACCATCTGAGCCAAACAAATTCtttcaaagatgtttttct tcATTCAAATAAGGTTATCAAAGttgaaataatcaaataaacgaaaatgt accgggtgacccacaaATAATTCAGAATTTTGTTGGCTAGATCAGGCAGA AATTAACTTTTTATAACGCAATGGTGAaatgtttaaaggttttgttttta aataagagtgatatcgtttgcttactcatcaattttaatcacAACTGTTT CACATTGGAttaacacggatgtggagcaagattggtcagatataggaaaa gaaaaacatttttttgcatatatcagcataatataactaaagcaagacac tgtcctggtataaaatatgtgtcttatatgaaacgggaacacttatataa aaacaaaacctttaaacacTGGTCACTTTAAAAATTAGACTGTAGTGTAG GTCATATAATTTTTCAGTTGATTCcttttttctaattcagttGAAAAAAG ACGAGAAAACACAAACAGAAGAGGAAGAGATCGCCAAGGGAGAAGTTGTC ACCAAATTTCTCACAACAGAAAAAGCCATCAAAACAAAACGCGAAAATCC ATTCAAAAGTGAGAAAAGTGAAGACCAAGCTGGCCCTTCATCcaacaaga aaaacaaagaagaggAAATCAAAACCATGAATATCAATACGAGTGAGTTT CCTTTTGGTTCGAAAGTTGATTCAAACCCTGCAATtatacgcttttttat aagaatagtgtaatTTGGCTAagggtgagcattatttttattctattgtt ctaaacaataggcctatttttctaactctgaaatctcacccttttattct tatagaagttattcttatatgTAGGTATTTGGTAGTGGGGTTAATTAGTA TAAGAAAACTGCAAATGGTTTTTTGACTCAATTTTGCACACTAACATTAT ATCAAATGTAATAACTTTTGGCCGAGAGAGGCAAAATTTATAGGGCCTTC ATTACCCTTGGAAACCGAAATAACGGTTGTTCGAGTTTCCTTAGTAACGG GAAACTTTTtcgttaaaaaatgaaaatttgttcgTGCCAATCGAAAGAAc acaaatttttgataaattagttaccttatcggccctttttacgccggccc tttttGGCGTTATACTTGGGCTCGTgtcgtaataagggccggcgtaaaaa gggccgataaggtatattaaACATGATCAAAAGTTTTGACTGTTTGAATT TTGTCATTGATGTCATTATTTAGCCCACTGCAATTTAAGGCATATTTCAA AATGCCatagcttttctcaaaatttgcaaaagtgtTCTCTGAtgaattta aaaacttttggtCGAGAGGGGTAAAGTTTTGAAGTCCTAAGTTACACATG GCAACGGTTTTGGCATTTGTAGTTTTCTAACAATCCAACATCGAGGAGGG TTGTCAAGCAACTTGGAAATCCTTTtgagaacttttgcaaaattaTGATA CCtgtaatatttccttttggTTCGAGGGTCGATTCATATTCATTAGAGAA ATTATAAGTGAAAGTTCTCGTGCCACAAGTCTAGCCTCTTCgtcagaatt ttcaaagaacCTTTTTATCCTTGATTAACATTACTTCGAGTgagtagatt ttattttttagttccAGAGACTACGTAGTGGGCAGAGGGATCAAATAAAG TTGGATATCCAGGTTCGATgattcaaaaaatcaatatcctcaacagtgga agtaaaatctttttctggaaaagccatTATAAATCATTATAAGATTTGTT TATTTATCTTTTAGACGCCCAGGAGAAGAAGAATCTTCCAAGTTTTTGGA TTCCCTCCCTCACACCACAAGCCAGCCAATCAAGAGTAGAGAAGCCAGAC AGTAAAGTGTACTGTCCCATGAGTGGCAAACCTATCAAACTAAAAGACTT AATTTCCGTAAAATTCACTCTGGCGCCTGCTGACGAATCAGATAAGCAGA AATCGATTGTCGCTAGGAAACAGCGTTATATTTGTCCGGTTACTAGGGAC GTTTTAAGTAACACTGTCCGATCGGCGGTGCTGAAACCGTCCGGTAATGT AGTTTCGATGGAATGCGTTGAGAAGTTTATAAAGAAAGACTGGGTTTGTC CGATCACTGGACACAAATTGAAAGAAAAGGATGTCATCGAGCTAAAACGT GGTGGAACAGGTTACTCGTCCGTTGGTAAAGACTCTCTTGAAGGAAAAGC GTATGGGCCAACCATGATGGTCAGCTAGAATCATTTATATTCACCTTGAA AGAATGTTGCATGCGTTGTTATACGTGCGTTGTCCGGAAGAGGAGGTGCT TCGATGGATTAAATATTAACTAACTTCCACACGTTTTACTTACGTAATAT CAGTTGCGTAGCCAACAGGGTGCAAGATTTGTATAAGAGAGAGAGAGTTG GTTGAGCCATTGAGTTCAGAGTCCCGAATGGGATAGAGAGGAAACTCTTG GCTTGGAAATGAAGCTACTTTTTCCCATCCAAACTGCGTAGTTTTCATAC AAACGtcgtattgaaaataaaattcattgcTTTGGTTTTGAAAAATGTAC CACGTGACAATGTGTGGTTTCTCAATACGGcgttttttcttgcttgagaa aggttgaagattcctctctagctctcttgggctttaaactcaatgggctG AACCCTGTTATGACATCTCTTTACTGGCTTATGAAAACATTTGCACTGTT AAAGGACTGAAAACTTTATAACAGCTGAGACTGACCTGAATTTTAGCGAC CCTTTTACCAGATAAAGAATTTTCTTCATTATTGTGAGAATAAATACCTA AAAGTTTGCAAATAATACTCTGAAGCCACTTTATGGTAGTGATTCGAAAC CACAGATTTTAATACTCGCTCACACACACTTTGCgttaaaattcttttct tttcgaacataatttaaaatttcgTATAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057511TCONS_00057511Clytia hemisphaericatranscript
TCONS_00057512TCONS_00057512Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057512-proteinTCONS_00057512-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_291supercontigscaffold_291:114476..121056 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NOSIPPREDICTED: nitric oxide synthase-interacting protein isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.99 29.92 27.1 33.54 43.42 37.18 42.45 41 25.49 24.57 20.4 15.82 16.51 16.41 18.45 17.89 30.25 27.52 11.09 13.04 18.64 19.74 55.9 48.62 26.45 26.31 19.35 18.65 33.96 39.7