XLOC_036503 (gene) - C. hemisphaerica

Overview
NameXLOC_036503
Unique NameXLOC_036503
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_301:30652..34589+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036503 ID=XLOC_036503|Name=XLOC_036503|organism=Clytia hemisphaerica|type=gene|length=3938bp|location=Sequence derived from alignment at scaffold_301:30652..34589+ (Clytia hemisphaerica)
ctaGAAATCACATAAAAATGagtaaaactaaaaaatataaaaaagcaaAA TCCAAAGCCAACAAAGACAAAGAAGACACATCAATTCAAGAAATTACTAT AAACGACCAGTCATTTACTGATTTCCTTTGTCCAATATGTTTGGAGATCT TAATTGAGCCTGTTCAAATGCCTTGTAAACACGAACTATGTACTCAATGT TTCAAATCTCATGTTGAAGACACCAGTTTATCTTGTCCTATGTGCCGACA AAGAATTTCAATATGGGTTAGAAGGAATGCTAAAAACAATACGTTAGTGA ACCAAGAAAGATGGGCCTTGATCCAATCTATGTTTCCAGAACGTGTCCAA CGTCGTTTAGATGGATTGGATGATATCGAAGATCAAGACAATTTTGGTTT GTGTTTATAAGAACACTGAACTCATAAAAATAGACTGGGATGGATTGAAT TCTCAATGTACCTCTATTGACCTAAGTGATAAAGACTAGGGGATTAGGTT TTACTCTAATAATGCAGGACTGAATAATGCTTTATGTATTATCTGAGCTA AATGTTTCACAGTTCTTGCTACGCTTCTGACTAAAAAATCCAGGGATGGA GATTACTAGAGATATCCATTCCTGTCCCTATTTTTATAGTTCGATGGTAT AACATCATGTAAATATTTAATTATTGGTTCTGATTGGTTGACAAATACGC TCTTTTTTTATTGAACAATCAtactaaaaaatgccaaaaataagaacaat tttaaaacaacCCCAATTTTAAGCAAGATAAGAATCAAAACAGTAAAATA GGGTATCAAGCCAGAAAAGACACAAATTTGATCTTAAAAACATGATCAGA ACAATTCGAGGCAAAAGTGTCAAAAGAATAAGAGTCGAAACAATATAAAT CGTGCCTCAACAAAAATTAGctggttctttaaaaaaaagagtgtatactG TTTCATATTTTCATCCTATCTGTTCTTTTATTcaattatattttatttca gCCCAAAATTTCAATGCAAATAATTATAATCAATGcaattaaaaaggttt ggtaaaAGGTGTTTCTCAAATGGGTTAGTCTGAACTAAGGTAAGAAGTTT GTAACAACAAAGCAAATTATTGATCTTTATGTTATGTCTTTTTTGCATAT TTCATTTACAGTACCACATCATAACATTGCAGAGGAAGGAGAGGTGAGAA AAGAATTTGAAGATCAAATGAAAAAAGTAAGTTTTCTAGTTCTGTCATGT CACTTGCAAAACAAGTTGGAttaaccaattttttttcgaaatcaatTCCT TAGCCGGATGTTTCGTTTCTGGGGATGCTTATAAGTAGTTTTAGTTGTGA AAAATACTGACGACCTGCACTTAACACTTAACATTTGATTTAGTATTCAT TTCAAGTCTGGGACCAAAACATGTTGATAACTTTAGTTTGCTTAAGGCTT TCTCTTGATATTCAAGAGATTTTCATGTCTTGAGGCCtttcatattcatg atattcgtgAGGTAAATGTTTTATATGGAAGCACTCAAAATAGCCCAGGC GTTTACCACAAGTTTCTTTGTTTCAATCCGAAATTATTGGCAAAGACCGG GTCTTTTTGAGTGCTTCTGTATAAAACAATACGCCATATGAAAATCACGA ATACAGTGGAGTTCACtactcgaacacgcacgaggaacacaaatttgttc gacttatggagtaaggtttataagccatcgttaactgaagggaccataaa acttgttcgagttaagagaCATTTCGATGTGAAGtataaggtttataagg cattgttaactgaagggaccataaaacttgttcgagttaaggagacattc gagctaTAGAGGTCCGAGTTACAGAAACTCTACTTTAATAACATTGTTTA TTAGATCGAAGAAGAACGAGCGGTGATAGATGCAGCGGATTTGGAATACA TCAGGAAGTTGACGGAAGAAGATAACAAGGAGCGACAGAGACAAGAAGAG TTGGATATGAAGGCTGCCCAcgagttgcagaaacaagaaATGGCCAACCT TGGTAAAGGGGATGGGACGATTAataattgtttgaaaatttagatCTTCC TACTCAAAAAAAGTCTCTTTTATCGTAGTCGCTGGTTTTGAAATTAATAC ACTGTATGAATCATTATTATCATCACTTTCTGCACAATGTTTAGGTTTTT CTTATGCTGTTCTGACTTAAATCCAACCTGTTCAACCTGTTCTTTCTATA GTgacttcatattttttttttctctccaaGGTGTAACATTGAAATCACCC AGTGAACATCAACGCTCATTGCTAGCATTATTGAAACCTAAATCACCAAT GAAATTGCGACGCCGAAGTATCCCTAACAAACAAGGGAGTAGTTCTTCAT CCAAATCGAAAGCGACTCGTAACATATTGACGTCACCAAACCACACGATT ACATCATTTTTCCAGAAATTGGAGCACAAAAACGAACCGAATAATACTCA ACAAAATATTAATGATATAAAAAATAGCAGTAAAACGAATAGTAGAAATT GTAATGGAACGAATTCAGGAAATCCCAATGATAGTTTGAATGGTAGTCTT CGAATTGAAAGAAATTTAGTATCAACTTCCAGCGACAAACAAGGAGTAAA CTCGACTTCCATGGACAACATTTCTTCGTATTCTAGTAGTACTGTAACTC GACCCACTCCGATTCAAATCGACTTAGACGAATCGATAACTGAAGACTCT GATCGGGAACTAGCCGAACGATTACAACGCGAATACGACCAGCAATGGCA AAATAATAACATTGTAATTACGCCTCAAAAAACACCTTTACGAGCCACAG ATAACCTTATTAGAATTGATACCGAATCGAAGTCATCGAAAATTGACCGA CTGAAATCGATTCGTAAGCGAAACGATGATTTATCGATATCTTTGCATGA TGTGGTCCCATCGAAAGCGAGGAAAACGCGTTAGTTCTGATTGAGGCTAT TGTTATGTTAGGTCCGATTTAAGATTTAAGTAATGATTCTCTGGTGCTTG ATTTAGTTCAGAATTTGGTGCTTGTATGACTTTTCGCCGGAATTTCATCA ATATTTGATGAACTTTATCGAAGCCACAGTACTTTTATTCCGAATAAAAG AGGCTCACTTTTTTGAGGTTGTTTTTTATCTCTATTAAGCTTTAAGTTTG AAGTGAGCTTTCTTTTCCTGGTACTTTTGACATTGAATTATTTGGTTTCA AAAGCACACTGTTTTCATCCGTGTTTGTTAGTAAGTATGGGGTACTTAGT CAATCAAGTCAATTCATAAAAATGAGTCTTCCTATTGGGCCATATCCATA CAGGggttggacgaacatttccagagggtaaaccgagaaaaatttccaga ggatgtttatttatttttccaagggggtaaaaagttattctaaaacttCC AGgggttaaaaattgattttagattGTCCATCCTCACTTTAAGGTTTGAA AAGAATCTTTCCAAGGgtaaattttgccattttccaggagGTTTTCAcac aatttcaatatttatttttgacttgaaaaggttcgtccaccctcctgtat ggttttttaatggaacatcCCATTAGGTATCACGTTAGATacagtttgaa aataatttagagGTCGTAGCAAAATTATTTAGTGCGGACAAATAAAATCA AAGCAAACCCATGTAATTTCGATTTGGAATTTTAAACATATCTACATACA ACTGATCGTTTCTAAAAGCCTCGCCTTGTTTTATATCCAACGAATTCTCA GACTTCATTCGtgcatttttacttttttgtgttttattgttattattata tgTAGATAATGATTTTAGTAtggtttttcatcatttttgaatttttttgg tgTGTCGTTTACttgtaaattgtaaattatATGTCGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057894TCONS_00057894Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057894-proteinTCONS_00057894-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_301supercontigscaffold_301:30652..34589 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.17 15.01 37.25 38.06 5.23 4.34 6.09 5.81 5.49 5.07 5.62 4.39 5.81 5.11 4.9 6.22 7.32 6.76 3.99 5.04 4.05 4.27 10.32 10.44 9.81 10.56 5.93 5.42 7.12 8.64