XLOC_036520 (gene) - C. hemisphaerica

Overview
NameXLOC_036520
Unique NameXLOC_036520
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_302:71121..76256+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036520 ID=XLOC_036520|Name=XLOC_036520|organism=Clytia hemisphaerica|type=gene|length=5136bp|location=Sequence derived from alignment at scaffold_302:71121..76256+ (Clytia hemisphaerica)
GTTCAAACCCAATAGATAGTGAAAAATTTTATCAACATACGCAGCACACC CAGGGCTAGAGGCCAAGCCAAGGTAaggtttttctgttttcttaacgatt tttatctattttggtCACCTTTTACTACAAACATAGTTACTAATCTTTGA AATGTAAGAGCTGTAACCTTTACTTTTACTCCATTTTTTATTATTACCTG ATTTTATCAACCTTTAAAATCTTTGTCTTTTGGAAGTCACTCCTTGCTCT CCCAGGGTTCATGGGCAATTCGTAGAAATACTGGTCAAAATCGAAAGTGT ACTTCCTTCCCAAGTCTCTGAAGGCATACTCCAGCTGGAAATGGCGATAT CTATCCTTAgcacaaaaaagacaaaaagttaGCTCCATGGTTAGCTGGAT AAGGTTTAATGTTACTGAAAATGTAGTCGAAACTGTTTGTTTCTGTTCAT TATCTCAAAATTTGGTGGTCTCAGAATTTCGATAATTTTAATATTCAGat ataaatgtttttttcttttataagcataacatttataagcatatacaggc tcagtttttgataccaaaacaaaggctctatttaactGTTGTTaaaagtt ttgatgttttttaaagATCAGTAAATTTCGCAACGCTCGCAACGGATTTT TCCACTTGAGTAGTGCTCCGTTCGATCGCAACGTTCGCAACGCACTTTTC TccatgaaatatttcaaaacctttaaatccTTCAAATACAGCCCAATTAG GATACGTTTTGCGAATCTTGGTCAAAAATATGAGAGAATTTAGCCCTGTG AATTGCCAATTATGCCGTGATTATGCCCCAGTAAGGCTCAATACTTTTAC AAAGAATGGTTTTCTCAAAAGTGTTTAAATTTCTTCCAGCTGGTAAATAT TTGCAAATTTTTGGATCGTGGGTAATGTACTTCACCAACACGGATCTCTC CCATGTTTTTCATAGCAAGTTTGGACAGCAAAAGAGTACCATTTTCTTTC TTTTCGTCTCAAGACCTCTCCTATAGATGAAAATTGAATTTTAGATTCGT TAAGAATACGGAATCTTTTTTGTACGACGAAAACTGgtcaaatttgacaa aaagaattaaagaaaaaatgtccTTGTCTCGGTCCTTTTCTCAGTCCtgt atatttttaatttttttgataatttttgaaaaaatcgacTGAAGATTTTG CAATTGTGCACCATTACGAATTGGCATCTTTTCCCAAAATGAAGGGTCTc tgttgaattatttttttcactttcaattttttaactggATTATCCACTGG GGTGGATtacagtagcggcctggcttaattttcttggtggtgcaaactat gaaattggcgcccctggtatttttgtccttatttgcgccctccatcatta agtgaaaatattaaACTGTAACAGCAGTGActggttgaaagtaacgcccc tattcttttaaatataaattttataccTGGTAAGTCGATTTGgtctatat ttttgctttctaaaactcttatcaaaaaaaattaccggataatctttaaa cttttgcgtcgctggtcttactttactgtctattaaagatcaatggctga aagaggcaaAAAATTCACAAGTTGGGAGGAAGGGTTCCTTGTAATtttgc gccgcaggcaaaaaaatttggtgtaagaaaggtcaaacagcttaaaagat cttctaaaacggagaaagttagtcagtatAAGACCACAAAAGCCACAGCG AgaatcaacaagttttgatcattttggcaatctctcattttggagGTGAG CATTcactttaacccctggtggatacacaacacttctcttacttctgatt caattatattgatagaagttttgaaaaaattctccaaaaattcaagagaa atGATGTAAGAAGGTAAAgtaaagcgccgcaggcgaaaaaaattaacatt gtactcatagaaggcgctataaacatgccgaagggcgccaaattgcccaa ttaaacatcaaNGtatatttttaatctttttgataatttttgaaaaaatc gacTGAAGATTTTGCAATTGTGCACCATTACGAATTGGCATCTTTTCCCA AAATGAAGGGTCTTAAAAAGAATAATCTctgttgaattatttttttcact ttcaattttttaactggATTATCCACTGGGGTGGATTATCGATATAGGGG TGTAAACAACGCACGATAAACAATTCTAAATCCCTTTATTTTGACCTGAC AGCGAAATGGATGCTTCTGTTGTGACTCCAATGATCACAGAAACATCAAC GAATGACGAGGTTTATAATTTCATANTGTGACTCCAATGATCACAGAAAC ATCAACGAATGACGAGGTTTATAATTTCATACAATTACAACACACTTCAA ATGAAGCTTCACAACCATCAGAAATGGAATCAACAGTTCAAACAGAAACT ATGGAACACGATTCTCAAGTGATCGAACCTCGGAAAGAAATAGGAACTAC TGCTGTAGACCAAACGAATCAATTCGATCAAAACATCACACATATGACAC AAAGTAAGTTCTATTTTAAAATAGTATCCTGTCATTTGGCTGAATTCAAA AGTACCTTTTGCTTTTAAATTGAACTGTGATACATGGAGTGTATATGATA CATACCTATGACTTTATCCTGCAAAATCTTACTTTaacacaccccttctc acagacccggtaggattgggatttatattcccatgttttttttatggctg gaaatttaaattccattgctttcgagtcagaaaattcagtgggcatagcg tcagccccccccccttagttTTGAGCCCCCCCCCCCCCCAAGGCTTTCGA CCCTCGACCATTTGTTCCACAAAAAAAAGGGTTATTCAATGTAAATTGTG TTGCAGTTCGAAGGTTAAGATAAAACATTTTGTTAACTAAATAAAAACAT TGCGTCGCAGAGGAAAAATTTTCAGCTTCATGAGCTTTAAATTTGAGTAA TTGAATCCAACCATTTTAAAGATGAAGTTTTCAGCCCCCACGTTAAATGA TGAGATTTCAGCTCCCCCAAGTACATAGGACCCCTCGAATATTTGAAACA TCTTCAGCCACCCTTTTTTGGCTTTTTGGAGGGTGTGACCCCCCCCCCCA GCTAGCATgggggctgacgctatggtggggatggaaaaatagcaATATTT GGTAGTGAAGATTTGGTTATTTGATTACTTTCAACAGGGGCAAAAATTGT AGCATGATTTTCCAGTAGGGAcaatattttgtccattttttccagTCGAA GGGGTTTCCCCCGTGTCTGTGGAGaagaaataaaacaattttctaaTGGG TAGGAAGTCCTACCGATTATGTGACAAAAAGCTTTATAACTAAGTCTCTG TCTTTAATCTTTTAGCTTTTGAACCTGTGAATTTGTACGTGTGTGACAAA TGCAATCGAACATTCAAACAAAAATCACGATACGAGCGTCATATACAGAA CCATCCTAGTGAGAAACATTATCTTTGTGAAACGTGTCACAAGACCTTCA CAAGAGTGTCACACTTAGAGAAACACATTAAAACGCACACTGAAGAGAGA AGTCATTTATGCGAGGTGTGTGGCGCCGCTTTCATTCTACCACACCACTT GGTAAGACATATGCTCGTTCACTCAGGTGAGAGACCTTATCAATGTGAAG TATGTAATAAAACGTTCACACGGAAAGCTGGACTCACGCAACATCAACAT GTTCATACCGGTCTACGTCCTTACGGTTGTGAGCATGAGAACTGTGGTCG ATATTTTACTGATAAGACTACATTACGTCGACACATGATGACGCACTCTA GTGAAAAACCATTCGTTTGCAAAGAATGTGATAAAACTTTTCGGACAAAA TCTGCATGTCGGAAGCATTATTTGCGACATTTTAAAGATGGTGCATCATA TAAATGCGGTGTTTGCGAAGAAATGTTTAAGGATGAAAGAGAGTATAAAA TGCATTTAGAAACACACGACGAGAAGCAACGTACCGGTGCTCACCGATGT GGTTTCTGTTTGCGTGTTTTCAAAAGTCAAGAAGATCTGAATGCTCATGT ACCGTTACACGAATCGGGTCTTCAATACACATGCGAGCGATGCTCTGCCA GGTTTTTCACACAAGTTGACTTCTTGAAACACACAGCCAAACATTTTGAA GAATCTACTTTAGCTGTTGAGCAAAATATACAGGAACAACACCACGTATC TACCGCAACCAATGCTCAACCAAAGGAGAACGAAGTACCACAACAAAAAG ACGCATTACCGAATCCACAGAATACTCTCCAAGAGGGTaacgaaaatgta aacaaactactGGTCGTCTTACAGCTTCCACAGTCTGCATCCAACCTCAG AAACGAACAAGGTGCGCTACAAGTGGACAGCATTCAACAACTTCTCGGTA CCGTAAGAATTGACAAGTTAGTTGTCACCACTGATCCCATTTCTAATTCA TCACAAGCAGTGGCTTTACAATTATCACAATCTCAACAACAAAGTATTCA GCAAATTCTACAAACAACCCATATCAGACGACAAAATCCACCTATTTCAA CTCTGGAAAGTCTCAACAAAGCCCCACTAAATGCTCTTGAGACACTTACA TCCACCTTGAACGAGGCTGCAACGTTTCCTGATTTGACATCACACGATAC GATGGACGCTCCCGATCTTTCACAGCACGTTCAGTCATCCTTTGTCCTCA AGTCACTCTCACATCAACCGCCCCCACCGCCGGAAAGCAAATCAGTCTCT CAATATCTCATTGTACCACCAACAGGCCCTGGGTTTACACCAATTGTTAA TTCGAAGATCAAAATTATCCACAAACCGCCAGAACCGATCGGAAATAACT CTGTTTTCACTAGACCACCTCCGAATCTTCTGCAAAACAATGAACTGGTC CCAACCCATCCTTTAGAACTGATCGTAAATGATGAAGATGTTCCAGAAAC AGGTGTCAAACAAGGGGATTCTTTTGAACCAAATACGACTTCCTTAACCA TGGGTTCTCTTCATCAGACTCCTGAAAATTCAAATACAGAAGAGAAAGTC AGGAATTCATCCTCGTCCAATTATTTTCAGCATTNa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057913TCONS_00057913Clytia hemisphaericatranscript
TCONS_00057914TCONS_00057914Clytia hemisphaericatranscript
TCONS_00057915TCONS_00057915Clytia hemisphaericatranscript
TCONS_00057916TCONS_00057916Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057916-proteinTCONS_00057916-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:71121..76256 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (4.17 tpm) - - (20.44 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.39 14.03 12.41 11.59 8.74 6.14 13.17 14.54 4.68 5.67 11.39 7.82 17.73 18.98 10.76 10.5 6.9 11.45 11.65 8.41 7.6 8.14 20.44 19.1 14.85 15.3 4.17 5.24 15.04 18.16