XLOC_037088 (gene) - C. hemisphaerica

Overview
NameXLOC_037088
Unique NameXLOC_037088
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_314:271512..278084-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037088 ID=XLOC_037088|Name=XLOC_037088|organism=Clytia hemisphaerica|type=gene|length=6573bp|location=Sequence derived from alignment at scaffold_314:271512..278084- (Clytia hemisphaerica)
CAATACTGATTTCTGTTAGACTTTTCGATGGTTTGTAGTAAGCTCGTCAT ACAATATGCAGTTATGGATGAAAATGAAGATTGGATTTTTATACCTCTGG ATGAACATGTGCTGGTATGTGCCAAACTCCTACCCAGTCCCCAGCTCACA GCTCTTTCAGCATTTACGATTTTACCGCCTTTAAGTCCAGAGTGGGTAGG AGTCAGTAAGAAATTTTACATTTTTAGCTGAAAGGAGAGGGTCCAATAAG TGTGAGACAGGGGTGAGTCGTCACCAATCCCTCCTATTTTTTCATCCTTT TTCCACATCTTGAAAGTTCGATTATGCATATTAAATTTGCGATTCAACTA GGTTGCTTTTCAAAATGTCACCGTCAATTAACTAAAGTTCCATCTTTGCA AAACTAAGAATCGAAATGGTGCCTGATACCTGGGATTCTAGTAAACTTAC TTCCACAAGTCATGTCATCAGTCTATTAAAAAGTCTTTATTGGATGACAG AGACATGATACACACAGTTTACCTTGCTGATACATCTCAGAGAAATTCTT CAATTAGAGGACACATCGTAATAAAGGGCCGCTTCATAGTTAGGCTGCAT GCATCCCCAAATTATTTTTGATACATCAAAACTTATCAGAGGGGATGTGT GCAGCCTACTTCATAGTATGTGTCTTGGCAGAATCTTTTTTGAGAAGGGC TTACTAGAAAAGGGAAATATAATCAACCTATCTGTTTCATTGAAGAAGGT TACTAATATAACAAATAACCGCGTTCATCAGAGGGATGAATTCTTATATT ACAGGATTTCTCTCGTAAATGGAGTTGATGAATCAGAGCTTTCACCGATA CTCAAGAAAATTTTGGATCCATTGATCTATGAAAAAAGTTCAATACCAAT CAAGGATGGTAAGAATGTTTTCATCGTAATCCATAAGTCCCTTATCTATC TTTTATGTAGATATATTTCTACGATGCAAATTTCCCAAGAGATTTCAACC TGTGCTTTCAAATCAGACTTCAGTAACCTGAGATTAGATTGTGATTGTTT TCTGCACATCACGCTGAAGCTCTAAAGAGATGTGTCCAAATTGACAAAAA ACGTCAAAATAAGGTCTTCTATCTTACATCCATGATGGGTGGCGTAGTGG TATATGATACCCACGTATCATCCTTGACTCCCGCCTGGGAGGCCCGAGTT CGATACCCACCGTGTCTCTACGATTCACTTGGCAAGTGAATATACCTTCG CCCGGGTCAACCCATGCCATGTGAGGGGATAGGGTACAATTACTCTGATA CAAGAGTGTGGGTAGATTAGACAGACATTGTGACGTGCCTTGACACTCAT AAGGTTCGGCCTCGCGTGAGCATCGCTCTCCCGCAGTGTCGTTTGAGTGT TATGGTATACGCCATGGCTTGGCATGAGTCTGTCAAGTCGCAGTGTCTGT CAGCGCCGTGATTCCTACTCCTTCGTGGGTAGGACCCATCCCGAATGCAT TCGGAGGGCTCATATCTATTCTATCTATATTCTATCTTACATCCATATAG TATCGTTAAAATAATTTATCAGTTACAATATACTAAAATCGTAAAAATTT TATTTAGATCAAAAGCCGATCCAAGCGACAGTGAGCATTTTCACTAACGA TATGATACCACGTGAAAATCTCGATATGGTATGTCTGTTTATTTTTTGCT TAGTTTTCTACTACTTTTTATATACTTGTTATATATGACTGTTATGGCCT TCATCCAATTTTCTTGGTGATTGTCTTACGGTTAAGTTTCACAGCTTTTG CAGCAATTTGACCGACTGAGGTAAAGTAATTGAATGATTCTGTTTACGGA CAACCAAAACAGATTCTCCAGGATAGACAGTAGAGCAGACAAGATCTACT CATGCATTTTCTTTCAATTTTTAAGCTGATCCTGATTTCTTACGTGTTAG TGCTACGACTTACGTATGTTCTATAGTCGTGGATATGATTAGAAAATACA AACTATTTCTCAATTTTTCAGCATTTTACATACGATTTCTTCTTTACAAT CGAATGGAATGATTACCGTTTGAAACATAACCTGTCAAGCTCCAATGATA CTGTTTTACCTTTCGATTACACCATTTTGAAAGACATCTGGGCACCGAAT CTCTACTTCGCACAAACGAAAGACGGACTTGTACCAGACTTCCCACAGCC GAATGTCATGGTCACGATCGCCAAGGACGGTGATGTGCGGTTGAATTATA AGTAAGTAAGCGGTTAAACTTTCATTAAAGTTTATGATGAATATATATAG TCTAGAAGTATAAAACCTTCAACTACTCAAAATGGAAACAATAAAGACAA AAACCCACAAAACAAAAAGACAATACAAATACAACAAAAATCTAGTATGA ACATTCACAGGAAATCAATCAGGTTGGAGTAGAAAAGGAAAATATGTATA TATAATATATATATAAAAATATTGAAACTATGATCACTTTGATCATTGAG AAAAATAATGGAATGGGCTAGACTTATACCGAAAAGAAGGTGAACAGAGC AGAATTAGGGCACAAAGAAGGAGTTTCATTTCAAAAAATATTCTAGATTG ATTACTTGGTTGGATGAAAAATAATGTTATGTTAAACGGCGGGTACGCTT ATAAGAGTACCAAGAATAATACTATAGTCTCTTAAGGGCTCTGACCATAG TCAGAAAATTGATTTTAGTATCTGAAAGAATTGCCTTTATAAATTACTTT TTAATCAAACCCCTTCAGAGAAATTAAGATCTTAATTGCAAAAATGACGT TATGAACTTTAAAAAGACGTTAATAATATGTTGCATCACGTTCTTTTATA AAAAGTGCTAAGTTTTAATGGGTAATTAACCTTTTTGTTTCGAACTTTTT TCAAACTGTCCGCAAAGAATTGATTTTAAATGACTATTTTAAATTTTGCG GAAAACTTTTCTAAAAAGATGTGTCAAAAGTGATGACTATTTTTTTAAGC AAAATCCAGATGAAAAATTGATGAAAAACCACTATTTTGAAGATTTCGAG AGAAAGAAGCATTTACAAAAATGTTCCGCAAAAATTTTTATTGTTCGGTA AAAGATACACCATCTACTGCGAAAAAATTTTCAAAATGTTTTTTCTTTGC CGAAACTAAGCTCTTCAAAGTTGAAATACTCCTCCTCGCAAAAGTCTTCA TTTTCTTCTTCATCAAATTTTTTCAATGAATGAGTCCTTTTTGAATTTTC AGATTCAGGAATAGTTTGTCTAACAGAATATGTATAACATGCCATAGTTT TGTTGGTTAAATCAGTCAAAAAACACATTTTAAACACGGCAATTATGAAA AATTCACTATGGTCAGAGCCCTTAAATGATGGGGAGTCAAGAATGAGCAC TTGGGTTGGAAAAATTTCTCAAATACTAAATTGCCGGGTTTGGAAATGAG GAACTTATGGAAATACTTTTTCACAATTAAATAAGCGAGCGATTAGGGAG TATTTTTAATCTCAGACAATCAATTTATTTTTCAGGATAATATTGACGTT ATTCTGTGCTATGGATTTGACGTTTTATCCGTTCGATATTCAAAAGTGTA ATTTGAATCTGGAATCGTGTAAGAATTTATTGTTTATAAATATGGTGTCA AAATCATCTCCAAACCTCACAGGTTTTGATAAAAACGAAGAATTACATAC AGGGGGCATGTTTGATAATGCCTCCCATCTACAGACAAGAGGGAAAGGAA AAATTGATAACAGATCGCAACCTCGTCCCCGTGTATCCCAGGCTTTATTC ATGTTACTGATTGACGCGTTCGAAAACCAGACAATGCCAGGGTATTATCT AGCACTACCAGTAAGCATCAAAAAGCTGATAATACGCAGGGAACGAGGTT GAACAGATCTTTTTATTTCTTATGTTAAAACAATACGTTGGGCCATTTAC AGTATAAAGAAGAATTTTTCCAAAAGTAATAAAATCCTGTTTTGCAAGGT TCTTTATGGCACTCGGAAATGTTTAGATCGAGAGATTTACAAAGCTGAAA AATGCTTTGAGGGATGCTTATATTCTAAGCAAAATTTTATTAGAGAAATT TCAAAAATCCTGCCAATAACAAACAAATTCTGAAAATGAAGGCTCAAAGT AATGTTTAGCATACGCTTAAATTTTTGCCATATATGAGCGCCTAGATACG CTTATAAGCGCAATGCTTATAAAAAAAAATTTGAAGAATTACTTTTTTTG TCCCAAAAAGGGACCCTGGATGGACATAAAATGAAATGACCCATTTAAGT TGCATAAGCTTACCGGCTATTTTTTGTTAACATTAGATTCATATGGTTTG CATTTCCTGAACATCAGCTGGGGATACTTCATATATGACAAAGAAAGAGT GCGAACACAAGATTTCAATAAAGTTGAAATCAAAACTGATCAGACAGTCT CAACCTATCACACTATTGGTCAGTTCATACTATCTATTTTTTGATTAATT AAATTTAGGTTTATTATCCTCAGATTCTTTGCAAAATGTTTACTAGAATG GCTCATAGAGATACCCTCAAAATATCTCTCAAATTTCATTAAAAATGCCA ACTTTGAGTTTTTGGCTTTCTTCTGTTTCTCCCATCTATTTGCTTACCTT CACTCATAAGATTAGTAAGATATGAAAAGCTGTTAATAATACACGTTTTT CTTTATTATAAGGAACACGTTTATAAGGAACTCGAGGCTAAAAATGGTCC AAAAAATAAGGAATTGTTAAGGAACTGCTCAGGCTGAGAATAAGAAAACA AGTTTTAAGGAATCCAATTTTTGCGAATCCANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNTATGTAAATAAGGAACTCGATAAGGAAC TTTGAGGCTGAAATTCTCTGTAAAAATAAGGAACTCCAGGCTCAGAGCAA AAGTTAAGGTTCCTTATAAAAAAACGTGTATCCATCCATGTCGATTCATC ACGATTTTTCAGGTCAATGGAAAGGTTTAATTATCGAATTCACATTTTAT CGAAACGCACCTTTGTATCTGATACGAGATTTTCTACCATGTACTCTGAT AGTCATGCTATCTTGGGTCAATTTCTGGATCAACTTTCGAAGTACGCCTG CGCGGACCGCCCTCGGTATAACAACTGTATTGACAATCGTTACCATGACG AACAACGTCCGGAATAATTCGCCAAGTTCATCAGGGTTGTTTCGAAGTAT AGACTTTTACATGTTGGTATGCAATATGTTTGTTTTTGCCGCTCTTGTTG AAGGGGCGTTAGTGGGAATGACCGCCCCTAATGAGAAATATGTGAAAAGT ACTTTTAAGAATCAAGTCAAGAAGGTTCTGCGAAATACACGAAATAAAAG CAAGAAGCTGGATATGGTAAGTAGAATGGAATCTCTATAAATCGAATACC CACAGGGAACTGAAATTTGTTCGAGTTAAAGAAACTTGCTATGTCAAATG TTTCTACTTTGCAGGTATCAAAAGCTTGCGAGCTTTAAGGAACATTTGAA ATATAGAGGGTCGATTTATAAAAATCCTACTGTACTTGTGTGTGAATTGA AGCACCGGGATGAAATCTTTCCAGAAATGTAGCCCTGTAAATTTGATCCA TCTACTTCCATTTGTTCATCTAATTTATTTAAAATTTGCCGTAAACCCGA TATTGGTGACGAAAGGTCTTTTAGAATGTTTTTAAAAGAAAGAGCTTTCT AGATATTGTTGTTCAAATCCTCTATTAAGAGATAGCCCGCGTTTTCTTAA TCGTGGAGAGTGTGTCGTAACATTATTGCATTATCTAGCACCCAGATGCA AAAATTTTCATCCGACACGCTAAAACTCTGGAGGTCGGAAAATTTTTCAA CATCTGGAAGGTTTACATTGCAGAATTTTGCAAGACCACGTCAAGAATTT TGCAGCCGGAGGTCTGGTAACCCAGCCCTCGTTTTTGGGGATTGGCTGGT CCAACCGAAATATTTATACCTTCCCGCACAGGAAGGCTGTTGAACCTGAC TGGGGATGCGGCACATCAAAGGCTGACTATCATTTCTCTCCGATGGGAAA TTGACCCGATCCTTTAGAGCTTTAACGTGGGCGGCTGCTAATCCACCATC GGAATATCAGATAAATGATTGCACTGCTTCTTGTCTCATTAGGCGGATGT AGTGAAGAGGCGATTAAAAGAAGAGAGTGAAAAGGAGAAAGAAGAAGAAG AAGATGAAGAGAAAATCACATCCACAATCATCCAACGCGTTCGACCAATC ACAACAGAGACATTCAAACTCGGCCCATTCCACTTTTACAAAGGAGAAAT TCATATCATTGATCGCATTTGTCGATTTTTATTTCCTTTTCTTTTTCTTG TATTCAATTTTACCTTCTTCATTTTTCATATGTTGAAAGATGAAAGTGTT TTGTAAATATAGTTCAATAAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058880TCONS_00058880Clytia hemisphaericatranscript
TCONS_00058879TCONS_00058879Clytia hemisphaericatranscript
TCONS_00058878TCONS_00058878Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058879-proteinTCONS_00058879-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:271512..278084 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.81 3.12 1.61 1.27 0.28 0.19 0.13 0.08 0.29 0.36 0.93 0.23 3.29 2.15 0.18 0.37 0.48 0.9 9.35 11.16 1.19 0.99 1.28 1.47 0.69 1.05 0.09 0.05 0.04 0.19