XLOC_037846 (gene) - C. hemisphaerica

Overview
NameXLOC_037846
Unique NameXLOC_037846
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_335:6286..10989+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037846 ID=XLOC_037846|Name=XLOC_037846|organism=Clytia hemisphaerica|type=gene|length=4704bp|location=Sequence derived from alignment at scaffold_335:6286..10989+ (Clytia hemisphaerica)
atcaaaaaaaggttcccACCTAGATATCCAGGCTACAATAAAGAGctgtt tgaattttttagaaCCAAAAGACAGTGAGAAAAAATGAAGACAGAAGCGG ATATAAGCATCCATCATAAACCATTAAAAACACATAAAGAATTAGTGGAA GAATTTTACTCTGGCATAACTCTTCATGGATTTCGATTTCTCTTTGAAGG TACAAACTATCGCCGCGTCACCTGGTTTCTAATCTGTTCAGCAGTATTTG CTTTCTCAATTTACCTATTCGAAAGTCTTCTAAATGACTACCTTGCTCAT AAAGTTAATACCAGCATTAGCCGTAGATACGCAACTGGAAAGTTTGACTT TCCAACTATCGTTATATGCCCTTCCGGTAAGGCTATATCATCAGCAAAAT ATGACAACTATCCAATTGATATTGGAATCGAtgattttagaaatttgaaa agataTCTTTCGTTAGGCAATAAGGAGAAGGACCACAACAGCAACAACAC AGGCCGTTTCATTCAGGATTTGATTCAAAAAGGGATTGATACGAAAACAA AGTTTATCAACTCTTACGATCTTCCGtttgaagaaattttccaaTCAGAC GTGTTGGAACATTTAGCACCAGGAGGAAGCTGTAACTTTTATGGTCAAAA ATGTGACACCTCTTGGTTCACAGCTCGTTACATTCAAGAAggtaacaatt tttttttgcggtaTGTTAAATAGTtactaacctgataacagatgtggAGT TTTTGTAACATTTACATTGAATTTCAGAAAGATGCTGAACTAACTGACGA TCTATGTAGAGGTGAAAATACACAATCTGTTCTCAAGTTAGTTAGCCCTG GAAAAGTTGGTAGTGTTAAATTTGTGTGAATTCTCTTCTGACTTAAAGAT ggataaaccagctgcgctggaaagtcagccaAGAAAGCTTAGAAATGATT AAGACGAAGTATAAATAAAAATCTGAGCTCACCTTACAATATTTGCTTGG AACGTTTCAGACGAAAAATGATTTGCACACAGTGGAATCCGTCCGAATCA GAAGTTAGAAGGCAAATTTATCTCACCTTAGGAAATTAGAACGAAATCAT TTTATCATCCTTTGGCCTTTTGACAGCTTTCACATATACTTCGGTTGTAT ACGGAGGCCCATTAGTGCCATTTAGATTATCCTTTAGTTTTTTAAcgacg aaactaaaaaaaatgacGACGAAACTAAAAATAAATTGTTGCTTCGTTTC GTCGTCGAACAAATTTACaacgaaactaaaaaattgacgacgaaactgaa aataaattgaaaatggtggccctgatGGTTTCAATATGCAAATATCATTG ATTCTGGCGGATTCTGAAGATGGATTTGATGGTTCTTGTGAATGAGATGC TGGTAATGACAAACCAGAATAATGATTTGACGGTGGAGATTGTTGGAATC ACCAGTGTCATTGGAATCATTTGAactaatcaatgatgaaatgaatGGTG CAAATGATGAAATCAGTGGTGCAAATTATGGAATCAATAgtgcaaatgat ggaatcaatggtgcaaatgatggaatcaatggtgcaaatgatggaatcaa tggtgcaaatgGtggaatcaatggtgcaaatgATGAAAACAATAGTGCAA ATTATGGAATCAATAgtgcaaatgatggaatcaatggtgcaaatgatgga accaatggtgcaaatgatggaatcaatggtgcaaatgatggaatcaatgg tgcaaatgatggaatcaatggtgcaaatgatggaatcaatggttgcaaat gatggaatcaatggtgcaaatgATGGAATCCATTGTGCGGGTGATAGAAC CAACCATTGATTTTATCATTTGCACTattcatttcatcattgattatttc CAATGATTCCAATGACACTGGTGATTCCAACAATCTCCACCGTCAAATCA TTATTCTGGTTCATCATTGCCAGCATCTCATTCATAAGAACCATCTTCAC CagcattgcattcaccagaactatCAAATCCATCTTTAGAATCCACCAGA ATCAACGATATTTGCATTTTGAAACCATtagggccaccattttcaatttt tttttagtttcgttgTCATTTTTTNAACCAGAACTATCAAATCCATCTTC AGAATCCACCAGAATCAACGATATTTGCATTTTGAAACCATtagggccac cattttcaatttttttttagtttcgttgtcatttttttcaacgACGAAAC GAAataaaacaatttattttcagtttcatcGTCAACTTTGTAGTTTCGtt gtcaattttttcaacgacGAAACGAAAtgataatttattttcagtttcgt CGTCAATTTCTCAGTTTCGTCGtcacactgggcgaaataagagattNTTT TTTCAACGACGAAACGAAAtgataatttattttcagtttcgtCGTCAATT TCTCAGTTTCGTCGtcacactgggcgaaataagagatttccaatcctgga aatatcttgaaaatatgatatttcaatatacttttgtaaatatggaaata tgacttttctatatttccaaagttgtggaaatgtcatatttcatgatatt tccaaatctaaaatatcacattttcaaaatatttccaacttttggtaata ttttgataatatgatgtttcaatgaatttcagatttggaaatatcatgaa atatgatatttccacaactttggaaatataaaaaagtcatatttccatat ttacaaaagtatatggaaatatcatattttcaagatatttccaggattgg aaatctcttatttcgcccagtgcaattttttaagttcgtcgtcaattttt ttagtttcgtcgttaaaaaattaaaggAAAATCTAAATGGCACTAATGGG CTTCCGTAGTTGTAAGTTAACCGGTTTGTGCTTCCCGACGGATCCTTACA GCAGGACTAAAACGgaggaaaaaaggaaatttttttgaattcgaATACTT TTATTGAGActtatttgaccaaatttcgatctttctggggaaaaaaagtt aaacattttcctatttttcctggGATTGAAATCTAAGTTTCTGATTTTCC TACCCTTTCAGGTACTGCAACGTTCCAAAAAAGCATCAAGGGGCAGCACA TCCGTACTATCCGTGCACTTGCCTAAGTAGCCcgtaaattttatgaaaat aaatctTATCGGAGATTTTtttgcattgtgggattgttttgggggtataa tataacaatagaaatctcttaagaattcctcgagggaaatctattgtaat acccccgaaacaatcccacaatgcatcgctgttttagaaaaattaaaaac tccgataaggtctattgccaGAGCTCTGAGTGTTCCAAATACAGGTTTTT CTTATTAATTTTTTCGTTCTTTAATTTTTAGGTTCTTGTTACCAATTCAA TGGATTGGAATCGTCATTATCGCTGTCTTTAAAAGCACCGAAAAGAATTG GTTACTTTGACGGTTTTAATTTAGTATTGGACTTTGGAAAAGCCATGATA GCAAACCCTTCCTACTCTAATGCTGTTATTACCATGTTTGAGAGTTTCGG GACACGTGATGATCACATACCTATTAATGGAGTTATCCAGCTTTCCACTG GAacaaaactttttgcaaagatCACCGAAAAAGAGGTATTGAATCTTAAT TTGGGGCCTAAAACCCCCATTTGGTATTCTCCCCCACCTACTCTTTTTCC GGGGCTCCCCccattggaaaaaatatttttgagaccCAACATTTAATCAT CTATTTGAAATGTTATATCTAACTTCTGCAATTTCTACCCCCACTTCCCA TAAAATATCCTGAGATCCCCCATNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNttttaaaaatataaatttcttccATTC TGTTTAAATAGAGGAGTAAAAAAACACAGTGTTCTCCCTTAAAGTTTTGT TTAGAAGCTTTGACTACTAACCATGAATTATGCAGTTTGTCAGATTTCTG TGAAAATAACCATTTGAAATTACTAGacataatttaaaaatatctaaaaa atatgattctatcccagctggcacacaacattgtttcaacgttcatctaa cgttatatggacgttgtaaacattagatggacgttgaaacaacgttgtgt gccagctgggattacGTACAGACAAAGCTTATACGTCACATTTTGGTCTC TAACAGTGGATCTTAATTATGCAATTCCGtcgaaatagaccttttcataa attatatcacgaacatcacttgcctcgttttgaaattattgccatggtga ttaacttccAGCGTATTTTATTACAattactttctattcataaaaaagat catttaatgtctcaagggatatgatcaccatggaaattATCTGGATACga ggtaagtgatgttcgtgacgtaatttatgaaaatgtctaaATTCTCTNTG GGATCAAAACTTGGACGAACAGTAATTTCGATGTTCTTTACTCTTTCAGA ATAAAATGTTACCGAGTCCCTATAATACCCATTGTGGTAaaactacactt tttttttataagaaccagtaaatttttgctgaggctcggctgttcttatt tttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060150TCONS_00060150Clytia hemisphaericatranscript
TCONS_00060151TCONS_00060151Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060151-proteinTCONS_00060151-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_335supercontigscaffold_335:6286..10989 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14 0.14 0.16 0.05 0 0.07 0.09 0.17 0.06 0.37 0.29 0 0 0.15 0.04 0.04 0.71 1.88 0 0.09 7.44 7.74 1.1 2.83 3.52 5.32 0 0 0 0