XLOC_038329 (gene) - C. hemisphaerica

Overview
NameXLOC_038329
Unique NameXLOC_038329
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:434406..438751+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038329 ID=XLOC_038329|Name=XLOC_038329|organism=Clytia hemisphaerica|type=gene|length=4346bp|location=Sequence derived from alignment at scaffold_354:434406..438751+ (Clytia hemisphaerica)
TAATTATTGGTTGTAATATTATGCTTGTCAACTGGAACGGGCAAGTGACC
AAGTAAGTTACATTACAAATATTAGTTTCTGTTCCTTCGAAAAAAAACAC
TAACAAAGCACAGTACTCATTTAGAAGAAGCATTTGGCTGGGCTCGGCTT
TTATTCTTACTTTTGCCAAGAAAATCGACCCCTCTTTTTCTTGTAAAGTT
GTTCTTGAAAATAACGtgtatgtttattttttaaccTTTAGCAGCCATGA
AAGACTCCGAGAAATAGGtaaattttcacttttatttaTTCATATGAATT
GCCTTATCGATGAGGTGACGAGGTGATATANTAGACTCGATCTATTTTTT
CGAGTAATAGTGATCTGTTCCTTTTGAAAACAATGCTAAACTTTTGTTTA
TAGTCAAAATAATAAAACGTCAAGCTTTTTTGACGACTTTATCACGTAGA
TACTGTATAGCAATCTAGAAAAACAGATCATAATAATTTTTGGAACAGAT
CACACACGTTTTGGATATTCAATTTGTATTTCAGAAGAACTTGCAGCAAT
CAAGATGTATTCTGGTCCCCTTTTGGGCGTGGTTTTAttggttttagcct
cgttttcgtTATGTGCGGAACATGGCGTGCAAATGAGGCTGACAAAGAAA
GGCATGGATTACAGTAAGTCTTGTTGAACTTCTTTGCATATTTTTCGTGG
ACAATGATGGAGGCACATTGTGGTCGAAACAGATGATGTTTTCGATACTA
AgtataattttatttcaaaagatttgaaaataagaTCTTATTTTCCAAGA
ATGGCAGCGTAAAAATCACTTCCTTTATTTTAACTTTCTTGGCAGTTTCG
CACTATTTCTTTTGGTGTAGTTGAAAAGAAAGTATTCGGTGTTAAAGTCT
AGTATTATGTGATATTcaaagttgaaacttttctaGCTGTCATCTGAATT
CTTTAGCTGCTATTACTCTACTTAGCTGAAAATATAAACTGGAATCGTTT
ATAATTCGTGTAATACGGTTGTTATATGCTAATACaataattgttacggg
ataatatcagtttgtataGGTCTAGCAAGCTCGACTACTGAATATTCAAA
GGAGGTATTATGTTTACTATAAGGCAATGCTTAAAATGGTACGATATGTT
TACTACAACAGAATTGTTTCATTCATTATcaatatgtttttgttttcttt
gtggtcaagtatttttaaaatattgttttttatcGCACTTGATACTCTTA
GAGCTGTACCCATGGACTTTGtttacacaaaaaaaatcactttaatcgga
ttaactttcgcgagattaaatttcgtgatttCGCAAATTTTTTCCGTTTT
TACGAAATTAAGCGAAAACGCGTGAGACTCCTGactcgcgaaaataaatc
caccacaaaaattttaaaatcgcaTTTTTGGTGGAGAAACCAGTTCAAAG
TCTCCATTTGTGGCAAAACATGGCTATTTTTCAActgttttcaggcttat
tcgcgaaattaaatccacacgaaatttttcaaaactatgactcgcgaaat
taaatccagatcATTTCGCGATTGTTttcgctcgcgaaatttaatccgat
tgaTAAAGTAAGTAATATTCATATCCCCTTTTTCCCCTGAAATTTAAATC
TTTGAATAGTTTTGTAATTCCAATGATTTGATTGGTTCTTTATTGGGCAT
TCTCCACAGTCTTATTTTGAGATACAGATGAGGttttctaattcgatttt
caaggtaatctggattttcattgaaaatggaAACTTATAAACTAATCGAA
TTCGAGAGTGTCAACTTCGATTGCACCTACAAACATGTATCTTCCATTTA
CCCCCTTTGTTTCAACCCCGCCTCCGGCCATGATTTCCAAATAGCTTCTC
TTAATAAACTTACAGTACGTATCTTTTTTCAGCTGTCAACGTTGGTATTG
ACATcttaaagaaagatttgaaaaaccTAAAGATCAATAAAAAAGGAACT
TATGGCAAAGTTCACTTTAACATCAAAGAGTAAGAAacaattactcttag
gttccaaataaacggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNgggggggcccgtttatttggaacctaagagtaatt
gaTAAATAGATAGATTTATAATTAACATTTTTCTAATCCTCGAAAATGAC
TATTACAAGGTCTAAAAGGTAGCTAAAAGATGTTAGCTTCCCGGGATCTC
CTGAATCTATTATGAAATTTCTAATGAATtatcttttttttgcttttcaa
aaatctagccTGAGTTTCAGCGAATTAGACTTTGGTCAACATGCTTTGAG
TCCAGTGGAAGGAGTTGGTATGAAGGGCGTTGTCTCTGGCATTGGATTGA
CTGCTTATGCGACTTTCAGTTACACATATATCTTCTTCTCCGATACAACA
CAGCTTCGTTTGATAGCAAGTGGTATTGATTTTGACATGACCTTgaaaat
aggtaaaagaaaattttgattttttgagatCCTATAAATATATCGTGTGA
AAAATAACCTACTTTTTTCGTTGACATTTCCCATTTAggcaatttaaaat
atttaaaaatactcTTGTTTTATACTCGGCGTTTTCACCCATTCCtcaaa
ttttacgttacaatatatattattattatattacgTTACAAACTATCGTT
CcgaaaaaatgattttctgtGAAATCCACCACCAAAAGTCGAAAAAATNC
GCTCcgaaaaaatgattttctgtgaaattcaccaccaaaagtcgaaaaaa
aacgaaaccttGCCAACATCCAAGGTTATTATCAACAATTCTTCTTGATT
TTCAAACCTTTCCATCATAGGAGACGACAAAGGTGGCCACCCAACAATCA
GTGTTCAAGAATGTCATGCAAACGTTGGAAGCATTGATGTAGCGTTCAAA
GGGGGGATGAGTTTCATTTACAATCTCCTCAAATCCAAGATCGAATCGGA
AATGGAAGAAACTCTGAAATCTTTGGTAAGAAGGACTAAAAAAAATCCAG
AGTGGTCTTGTTTTTGAGAGTGTGAAAATTCAGGTTAGTCCtgagaaata
aaaaatccagggtggtcttgTTTTTGAGAGTTTAAAGATCCAGGGTGGTC
TTGTTTTTGAGAGTTTAAAAATCCAGAGTGGTcccgaaaaatcaaaaaaa
caatcCACAGGTGTCACTTTTAGACTATCAACATTCAATCAAGTGGTGAA
CTACCAAACTGAGGACTGGAGGTTAAGCATATAATATTATGTATTTCCGT
GAGTTCTTGCTTCAGTCCGTTTTATGCACGCGGGTGTGACCTAGATTTCC
GAAGCTGTCCCTGACCTAATTTCACAATATTATAATTAATTTTATCAATT
TCAGCTTTGTAAAATGGTGACAGAAGAGATCAACACAAAAGCCAGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061069TCONS_00061069Clytia hemisphaericatranscript
TCONS_00061070TCONS_00061070Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061069-proteinTCONS_00061069-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:434406..438751 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.99	1.04	1.02	0.36	19.49	13.21	64.3	67.8	54.88	29.66	27.79	94.13	64.52	61.98	43.79	61.28	14.98	21.04	93.85	116.66	47.96	41.25	34.93	40.06	59.77	39.5	8.22	13.58	127.07	108.38