XLOC_038805 (gene) - C. hemisphaerica

Overview
NameXLOC_038805
Unique NameXLOC_038805
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:319177..327183+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038805 ID=XLOC_038805|Name=XLOC_038805|organism=Clytia hemisphaerica|type=gene|length=8007bp|location=Sequence derived from alignment at scaffold_361:319177..327183+ (Clytia hemisphaerica)
CTGAAAGTTAATCTAGGAAAGCCATTTAATTTGTAAGTTTAGTAACTTTC ACTTTGTACAACACCCACCCTGTCACGTAGCCCCCGCCTGCCCCTCCACC GGACCCACCGGCAGTTTGCGTGTTTGAAAATTTAGGCCAGGGGGGTTCCT CCTGATGCATAGCACCAGACACCAGAGCGGAGAGAGTTGAGTGGGgttag aatagaccttttttaaagaggcagccatgttgaataattatgtactccag cataaaaacaatgatgatACAGCCatgaataatttttaaaatatccaTGA TACggtagctgggagacccgacttctctgtctatgtggtttcaaaaagat atcaaagtatagacagtagcagccgggaattatacaagatgtcaagaatt aatcgcagaatttgattggctgatatcttattgttatgatttgataaaca aaagtatgacgtcaaacagctctattgtttcaagaagtggcgcaagcttt tgaattgttttgaaaaaataacgtttttttcttttgtgatttggagtgat ttgaatcgagtcaataattccatactctgtatttcagtgaagttgttggg attttaacaggatagaaatatttttgtaacagagtaccgtgagtggtcct aaatccgacagccctgcctaaatccgaccccccaaataactgctatgaaa aaaaattctatgtttacaaacattccctctccaagttgagcaataaacta tattgcaacaattctcgaaacaaaacatctaacaagaagactaaaatgtc aagatgtcaattaatgtgataaaagTTGTACAACaagagttgtaaaaata attacctttattattctgaatccgttgttcgtgttttttaaaacgttaac aatttagtaataaaaaaaattatgttttgtataagaagcaattaatgttt tggttcaattggttcagtgcatcagatctctcagtttagttgacactttg gtatcttcattgcgtcacagcgaaagacttgtttttattttagtttgtat ctttgaaagaccccatcggatttaggcagggctgtcggatttaggaccac tcacggtatggTCTCCAGACTAGATAcagcatggctgtatcattgttttt atgctgggagtagataattattcaacatggctgcctctttaaaaaaaggt ctatttggaTGTCCTTTTTACATCTTGTCCTTGTCTGCCACAGTGTCAAA AAGTAGTCTCCGCACGACCCCCTGCctgtgcacccgacagtcggggttgg cagacgatatcatactccaggatgcaagtaacatttttcaatctgcggac ctagatgggggttcggttattatcagttatggttagggttggagctcgag agtcacaatataaggccgaaggtcttcttaggggcattcgtaccctgtga cttaacttaggatcccccgtagggatccttgtaggtgcaccggtagggtt gggagctttcttaattagggtctgtaaattacacgctataagtatttgtg aatgacagcgTTCTGTCGTGTCTCGTTGGCGGAAGCGGTTAAGCATTGGG TTAATAAACCAAGGTTGTTtgtatttggtggttcgagcctgTTTGGAGAc ctgtttcaccggtacgggcaaatttcagaaaaatacttagaacagttaga aacacttgagaaagacagaaaatctggatagaagataggaaagtagaaaa tagggggaaaatgagagacgatgcatcctggagtatgatatcgtttgcca accacaTTATCTAAGGGTCTTATCTGTTTCATCTTCCTTTTAAGAGCTCT GAACCTAGAGTTCAANGAAATAGGGGGAACataagagacgatgcatcctg gagtatgatatcgtttgccaactgACACTCGGGTGCTGTCAGGCTGTCGG GTATTTTGTCGGgtgctgaaatttctaaatttgcgaaaacaCCTGAAAAA TAGTGCACCTGACAGTCGGGTGCTTTAAAATTCCTAACTTAGTGAGAACA CCCGACACCGCCTGATGGGCCTTTGGCTTTACGCCCTATACTATTTCCCA CTTATCTGGTATATACTctatgtagaaattttcttccgacacgctaaagc tcggaaggtcgggaaaattttaacatctggaacctttgggttatatacca tttttctttttttctgtaaggtttctcaggcagcagagattttcatgccA AATTTACTCAGGTGCAACcgatagtcaagcaaaaagtgtaaggacagcta gacacgactgtgatgcggtacatcaaaggatgactactataggtctccga tggtatattggcctgCTCCTTTGGAGCTTTAGCGTGGttggccgccaata cgccatcggaatatcagataaatttCCCACCATTTttcacaagtgttacg cgtaagccaaatcgcgtaacacgaacaacctctaaattgccgagtacagg agaaaaaaaattgaaattcaaatggcggccaagcccacgctgataactat caaaaatcttttgtgtttcaaaataaaacgatttccaaaccaacctaaag tcggtgtctgccaactaaaaatttctctgcggggtcactggcaaggattt acaacttcagactttagattccaattcttgtataggctgcaactacactg ccaaatgatctgtatcaaaaagacttccaaatgggtTCATAAGTtataaa aatgagattatcattagcacaggggttttgtttttaaaaataaacttcaa aataaaattgttaatgaacttgttacttaaaatatcacttacttacataa tttatttatgatataacacccctttcttaaataaatggtcTNNNNNNNNN NNNNNcctttcttaaataaatggtctcttaaagtcttttatgtttgccgc aagaagggagaaaaatttaatttgacccccggttttttctctctttttct agcctTTTCctgcgtgttagtgtagacacttaactttaatccggggaaat gaagcgttttcattggtctaaaatcacggatggtcatgtgaccagaattt ttatccagggaaatgctgtggccgcaatgttttgatttagtgagattgac cattttgttgtttagatttgagcgggcaaaatttctgtacaaaccaaaat atggctttgttggaataccggttgaaacacttgtgctTTTCCGATGCCGT GGGCGTCAGTCATATGATATGAACCTCATCNCTTGTGCTTTTCCGATGCC GTGGGCGTCAGTCATATGATATGAACCTCATCGGCCCTTATAAGGCACTA TTTCTCTTCACTGGCGGAAAAGGGCCGGCGTGTAAATTGGATCAACGATG ggtttaatagaccttttcaactttccaaaaatatccttattcggctgacg gtaaattattctcctgggaatagaaccgtcagacgatcaaatcaaaacat tgatctgaaccctctgaatgtgtgacgtcataatgactgctttcagtttg cgtgttttgaaagtttgatgtgtgtactccgtcttggtggaattttttat CCCGTCCTCATCTcggttgagatccctctaaattgGAATTGATAATTCCA CATAGGAAAGggctagagacttgaaattttcacagaatgtactTATATTT Ncggaatcaagataattccacataggaaagtgctagagacttgaaatttt cacagaatgtacttatatttgtcctctaaaggataaaagaaaaaggagaa aGAAGAACACTATTGTGGAGCAATACCGTCTTTAGCCGCAAATCACGCGC ACTAGCCTCAATAAATATTAGGTGTACTGGACATGGTTCATGTACTAtta atgaggccccccagcggacccaaaattcacgccatcacgccaattttttt cgatttcacgccatcacccctgaaaaatttgattttaacgatcacgccaa tttttttcgatttcacgccatatTATGcttagaaaatttaattttcacgT TCATATTCATATACCACGTTTAGACTCATTGTTATGGATGAAATGCCGtt atataaacttaatttttgcccacAAATAGGTGTGTGTTTTGTGGTCAATC AGTGTTTTGGCATTGTCATacgcgtaagtcaagattatattatttttcct atcggaaacacctgaaaaatttagaaggaatttgacctctgtttttctat ttttagcaaCACAGtcacaggggtcaaattccagttttttcgGGTCTTTC GGATAGAAAAGATGACGTAATtttgacttatgcatatcaaaaatagTTTG ACAACTGATGGGTCACATTGAAGGGCCCAgtttgagggctgaggtatatt tgagttaattgacaaagcccaccatggttgggcaacggagaaaatttttg aattttgaagggttaaaagtgctattttaggacccattcaatttgaaaaa taattcatgtaaaaataatggaaatctttcAAAAGTATAAGTAGCTTTTT TTGGTAAAACATGAAGGCCATTTTCCCCATGGTCCATGgacattaattgt gaattagtgTGAATAGTTTTGAAAAGGGGAACgaagagaaattttcaatt cagCATGGCTAAAATTGTCCTCATCtactctcttttttccaaaatatgat tTAAACATCACAGGACTGCACAGGATTCCAATGCCAATCTGCtcaaaatt acacctcataaaTAAATCTGTTGCTTCTTTTTGTTTAAGGCTTTGCtatg aatatatattttcctgaaataaaggacNtctgttgcttctttctgtttaa ggctttgctatgaatatatattttcctgaaataaaggacctgatgtcttt gatgcatctaagaataagcatctaagaataagcatttaagaaagagagga aaatgttagttacggaggatgcgcaaccatggtttgcgctgacgggagaa attttcaattttcgtccCTCTTGTAGCAttcaactttattttgaagacta gccAGCAAGTGCTAAAGACAATtggaagttacaaggataaatggcagatg aataaaactgtttgcaccgtttctttaatgtttcaaaatgaGATCTATAA GAGATCtatagttggggccgaccaagaaaattttgaaattttaaccctct aaattggctaaaatggacattGAATTTCTCTCGCGGCCTtcaggggaaaa ggaaagtgatcaatattcttcgaaggaagaacttgccaaaaaaaacccta gacaaaaagatgtcttttgaggttgggaatggatcctgtgaagatgaaaa aattttgacaaggtgtttttttggcaaacccaaaaactctaatttttttc ttccctcaagctaaaaCGGTTACAGGTTTTGGGCAATCAAGGCAAAAATC AGATCCTCACtgaacagtcccatgtttcaacaACCAATTGTCCTAAGTTA GAGTGGTTGAcggtaattttgaatgaaaaggtGAAAACTTTGACACCACA TTGCATGAAAACTTTTGAATGGAAATTACATACAGGTATTTACTTCTCAG ATCAGAAAGTGTATGTGAAATTGACTCTACTTTACTATTTTATGTTTAAT TATTGGCCGACATTCCATACTGCATTATAGATACTTAAACTTTGAGATAT CATATATTACATacatttcttcttttcatctGCTTTTTTCTTTACTATCA AGGCAGTTCGTGGTAGTTCAATTTTtgaactgatttttgaaaacatgaac cttaatttcttattattttttgattatgtAATCCTTTTGAAGCAAGAAAG TGTGACCATGCTGATTCACAAACCAATGAAATGACATCCAAGGCAAAGAC AATCCTTTTAACAGGATAGACCTACCATGACACACATCCTGTTTTTATGG AGCAACCAAATGAGAAAACCATGGTCAAACTATGCCGTTTTCTGGATCGT TGTGGCTCATTGTGTCATTTTCCATCTCGTTGTGTAATTTTTCGGCTCGT TGTGTCATTTTTCGGCTCGTTTTGTCATTTTTCGGCTCGTGGCTCTTTGT GGCTCTTCTTTTTCTGGCTCGTGCCATTTTCTGGCATGTGGGTCATTGTG GCTCGTTGTGCCATTTTCTGGCTCGTTGTGGGTCGTTGTAGCTTGTTTTG CCGTTCTCTGGCTCATTGTGGCTCGTTGTGGCTTATGATGCTATTTTCTG ACTTGTTGTGCAATTTTGTGGCTCGTTGTGGCTCGTTCAGGCTCGTTGTG TTTTAGTATTACCCTAAAGCAAGGAATCAAAAAATCTAAACTGTAGCCTT TCAATTTATTTCCAAAAAGATATTTTCACTAGTATCATTTTAAATGATAA GTCATCTCCTAAAGAATCTTACAAAATTATGATATCAATCATTTGGAGTG TATTACAAATACTTGTTTTTCACTCTGATTCTGAGGTTCTGAAATTCAAG GGAGGTCGCAATgaccaggcggtgtcaatcgaGCAAGTTTGAACGAAAAT CGCGATTGAACAAATCAAATGTAATcaaacgcgatcgaataattgctaTT TGATTATCGAaagcaatcgaatcgcaatcaaacagctgattcctgggtaa tattcgattgtgtttgattggtattaaattcaatttagatttgattacgt ttgatcagtttgattgcgataatgttttttttataagattaatTGCAATT AAATTATCTCGCTCTCTTAGAGCTTTAGTGTGGGCAGCAGCCAATACGCC ATTGGAAAATCAGATATAATGGATGAGTGCATAAGTACAGCACGAGACGA GAGTAATCGAAGTGAGTGAatgcaattgaatcaatcgaacataatcaaAT ACGAACataatcgaacagcaaatcttAGGTTATATTCGATTACGATTTGA TTGCGTTTGACAGttgaatcgcaattattcgattgcgttcgattgtgttc aattgatttgGTGTCCGatttgtttgattgacaccgtctggcaaTGAAGG CTTAGCTTATCAGTTAACAGTTATCTTTAATATAAAACGTTCAAACAGAT AAAGATgatatattcaaattttgatttctttagaAATGAGAATACTGAAA AAAGAtgatatattcaatttttgatttttttttatagaaatgagAATATT GGAATTTAATCATCTATTTATCAATCTTGAAATAAAATGATAAGCAACAG AAGTGAGAAGACAGGAATGAAAAGGCCTGTAAAAACATCTTCATCTGAGC CTGCCAATAAAATTATGAAGAAGTCAACAATTGATTCACCAGGAGCAGTA AAGCCTGGTCACTGGACACAAGGTTTAAAACAAGCTCTGCAAAATCCTAA AAACATCATCctagaaactgaaaaatgctctgTAATTCATGATAAATATC CAAAagcgaaaaaacattttttggtgATTGCAAAAGGTGATGTATCAAGT ATGAAATCTCTGAATAGAAGCCATGTCCCACTGATAAATGAAATGATTAA AATCGGTCGACAGTTGGAATCAACAGAATCAGACACTAATCCGTCAATCA GATTTCGAATGGGATTTCATGCAGTACCAAGCATGACACTCTTACATATG CATGTCATCAGTACAGACTTTGATTCAccatctttgaaaaataaacgtCA TTGGAACTCTTTCACCACTGATTTCTTTAGACCAGCAAATTCAATTTTGA GTGAATTATCAGAGAAAGGTTGCATAACTATTGATACCTTGTATTACAAA CAACTTTTAGAATCTAGTTTAAAGTGTCATATTTGCAATGCTGATTTGAG GAACATTCCAAGATTAAAAGAACATGTGAGAACTCATTTCTCCTAAGTTG AACGTTTTCTTTGTAAATTGTGTTTCTATATTTATAGTCAATgcattatt ttttataagatagtatttatttttattgatacAAAAAATTAGCCTGTCAG ATTCCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061870TCONS_00061870Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061870-proteinTCONS_00061870-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:319177..327183 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.33 30.08 13.62 11.25 11.76 7.64 7.73 6.71 4.88 4.2 3.86 2.28 3.12 3.09 4.39 4.71 7.29 6.71 3.34 3.99 4.27 3.12 47.64 40.38 3.67 4.34 8.1 6.94 18.31 23.71