XLOC_039108 (gene) - C. hemisphaerica

Overview
NameXLOC_039108
Unique NameXLOC_039108
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_364:335117..341194-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039108 ID=XLOC_039108|Name=XLOC_039108|organism=Clytia hemisphaerica|type=gene|length=6078bp|location=Sequence derived from alignment at scaffold_364:335117..341194- (Clytia hemisphaerica)
AAAAAATTACACTATCGATTCAGCATCACGGCATTCACTTGGTAGATTAT TCTTATAGATAAAAGTCTATAGGCCTATGTTATGTATCGGTAGGTGTATC GAGAATCCATAATTTATCCTTATCGATAAAGTGTTGAAAACAAAAGTGAT CCTTTTCCCATGGAATGTCACATATCTTGTTCAAAACCATGAAAATAGAC TCAAGTTAATATTTTTTTGAAAAATTCTTTCTCGTTGCTGAGATATGGAC CCATGAAATTTGTCTCAAAACGGTCAAATTTTTGGGTTGGAAATTGAAAA GGACTTTTAAGTCACCATTCATGACTAATCAAGCATTCTTTACATCAGAA ACCACCTTGTCATGGTACTCTGCCATGATTTCTGATCAGGATAACTAATT TTCAGACGTTTTACTCATTTCCTTGTCTAAGAAAACAAAAAATGCCTAAT CTTTGAAGACAATTTCACCAAGAAGCAAGAGGTTGCACATGGATGATTTT GAATGATTTGGAAGACAGCCCTACATGGACTGTTAAAGATGTAAAAAAAA TTATGTGCGACCTCACGTTTTCAGGCAATGACCTGCAAAATAGGTATAAC TACATTATTGTTTGTATTTTTAGTTTCAAATTCATAAAAAAACATGTCTG CATCAGCTTTTGCAGCCAACCAAATGGCAGGAGGGAAAAGGGAACCCATT ACTCAAGCAACTGTTCAGAAAATGCTTGATGAAAATACACAATTGATTCA GGCTATAATTGAATATCAAAATCAAGGCAAATTACGCGAATGTGCTCAAT ACCAATCGATTTTACATAGGAACTTAATTTTTCTTGCAACGCTGGCTGAT TCCACATTGAATCAACAACAAGGAGGTGGACAGCCACAAAAAGGGAATAC CCAGCAACAAGGAAACTCCCAACAACAACAGCAACAACAAATACAAGGAG GTATGCCAAACATAATGCAGCAACAACAACAGATGCAACAAACACAAATG TTAAAACAACAACATCAACAACAACAGCAACAAACACCACCAACACAACC ACAGACAAATCAAATGCCATCTCAGCAACAAAATATGCAAATGCAACAAG TTCCAAATCAACTTCAACAACAACCACCAAATCTTCAAGCTAAACCACCA CAACAAACTCAACAACTACTACTGCAACAGCAGCGCCAGGCCCAGCTCAA ACAACAGCAACAACAACAACAACAACAACAACCTCAAGCTCCAACGACAA CACATTCTCCATTACAAAACCAACAGACTCTCTCTCCCCAACAACAGCAT AATGCTCCCCAATTATCACCTGCTGTTCAAAATGTAGCTAGCCCTGCATC AGCAGGAACTCCTCCAAACAATACATTGCTTCAAAATAACACAGCTGATT CAACTAACTCTCCCTCGTCAGCCCCATCACAATCACCTGCCCCATCTACA GTACCTAATCCTTCTTCTTCACCGCTAACACAGCCAACTGCAGCAACAGT TACCATGAATGGGACAGCTTCAGTGAATACAAACGTTGCTACTCCAACAA CATCGAACACTTCCTTACCTAACCAAATACAACCTCAGGCTAATCCCATG AATCAGATGCCAATGATGGCAGGTTATGGTCAGCCTCCCATGGGTATGAT GCCAGGCATGCAAGGGATGCGTGGGATGATGCCACCTGCAATGATTCCTG GTATGCCACTAGGAGCCCACCCTACTCCTGAAATGATTCAAAATATGATG ATGCAGCAACAAATTGCAGCACGTATGGCAGCTCCCCAGCCTGACGGCTC TGGTGGGTTTCCACAAGCCAATATGATGATGACTGCAACAAATAATAGTA CACCAGCCACCACAGCTCAAAATTTTAATGGATAAAGAAAAATAGTATAT TAATTTGGTTGTTGTTTTTAAAGCTGGAATGCTTTTTATAATCAGATTGA AAGTGCATTTTATACCTGAGTACTACTATGGAAAGAACATGGAAGTTTAC TTTCAAGATAATTTTTAAAGTAATTTTAACATTGCTTTTTAGAGAAAAAA CAGAAATGAGAATAACATTGTTTTTTAACTGTAACATATTATCACCAAAA ACTATGTAACAAATTTTGCAAATTTTTTATTGATAAATATAATCTTTGTG TCTTGTTTGTACTAATACAGCTGAATCTGAAGGTCAACTTACTACAGTCA CAAAATAATCATGTAAATATAAAACAAGCATCTCTGTATTTCATTGCAAT GTTATGGCTTGTTAACTGGGTTTCTTTCATTGTTATTGGGCCATTTTTTG TAACTATATATGCCTGGGTGTTAACAAGAGTTTCAAAAGGTTTTCCTTTC CTTGACTTTTTTCATGCCCACTGTGCCATCATAATATCGGTATATAACTT TTTTTTATCTATTTATTTTCAGCAAACAAATAAAAAAGATACAACAAGAA GATGAAAGTATTAAGCGGGGCTTGCCCTGACTCTGCATGCCAGAAACAGT TGTTTTTCTCTGAAGAACACACAGCAACAATTGAATGTTCAAATTGTGGA CAGCGTCACGAAATCAAACACCTTGTTAATGTAGAACAAGTGTCTGACCC AGGACATGCGCTTCGTGGATTACTCCATAGCCTTGTTGAAGGACACATCC CTAGTCATGTTAAAAAATCAAGTGAATTTGTCAAGGTTAAAGGATTGTCA AACTTTGGTTGCAAACTAATTTCTCCATTACTTACAACTTATGGTTTAAA AGGACAAGAAGTTCGTCTTTTGAAAGACATGAACCAAGGTGAAACATTTG ACTGCTCTCACCTGGCTGACCGAGCCTTCTTAATTGAAGAGCAAAATTTA TTGATCCCAGGTTACGGTAAAGATACAGCTGCTAGTTACCTCCATGACAC TCTGGATGAGATTGCCAAAGTTAATGATAATGAGGAGAGATTAATACCAA TCCATGCAGATGGAGACGGCCATTGCTTGCCACATGCTATCTCCAGAGCT TTGGTTGGTCATGAATTATTTTGGCATCCATTACTAACCAACTTGAAATT ACATTTCATGAACCGCTTAGAAGACTATAAAAATTTGTTTAAAGATTTCA TTGAGATTGAGGAATGGAAAGATATTATAGATGAAAGTGACCCTAATTTT GTTCCAAAGTATGGTGAAATGCACGGTTTAAGAAATATTCATATCCTTGG ACTTGCTAATATTCTGCATCGTCCAGTAATTTTGATTGACAGTTTGGAAG GTATGAAATCGAAAGGTGATTATAGTGGAGTGTTTCTCCCAGGGCTAGTT CCTATCGAAAAGTGTAGAAACAAAAATGGCAAGCTTCATAAACCTATTGT TATTTCTTGGAGTAGCAAAGGTCGCAACCATTTCATTCCACTTGTTGGCA TCCAAAACAAGGAATTACCACGATTCCCAGCTAAAGTGTTACCTAAAGTA TGGGGTCTTTCCCAAAATCTTTTAACGGAGTATATCGATTTTGAGGATGA AGCTTGCATTATTGGTGGTAATAACAGTCTACAGGAGAAATATTTGATCA AACTGACTCAAGCTATGGAGAGACAATTTCTTCTGTTGAAAGGTGTAGCA ACTAGTGTCGTCACAGATGTCTATCACCACCTTTTTCGATCATCTGGTCT TGTAGGGCTTCCTCCGCAAACAATCACTGAAGCAGCTTTAGGTTTGACAC GAGAGGAACGTCTTTATAAATGTTTATATTGCCATGCGGTCATGGAAGAA AAATTGCCGTGTGCTCATTCAATGTTGGAACCAGGTGAGCATTTCTCAAC TTTTTCATTTTTGATTTATTTTTGATGGGCTTGTGAATAAAAAACTAGCT CCGACGAATTTTAGATTCTAGGTGGGCAAATTCTTAGCAAGCCCGTGAAG AGGTGGACCGAAATTTTAGACTCGTGAATTGTTATTTTATTTGTGCTTTG GACTGGTGATTTTTGCCGTCCGCTGAGCCTAAATAAGACCCCGGGATGTT ATTGTCATAAACACTAAATCCTAATTTATTTTGAAACTTCAGACACATTT ATTGATGACTTGACGTTTTCTAATGTGAATTGCGAGTGTTTGATTTTATA CAAACTTTAATATTCTTTAGGGGGTGAACTCTTCCAAATTGCGATCAAAA CACATGGGGTGCTGAAAGATAAATTCAAGTATAGATTCCCAGTTAACGAT ATTATATGCCAGTATGATAAACAATCAAACAGGTTGAAGTATGTACACAC ACCAGAATCATTGTCGTGCCCACACTGTAAAGGAGCTTTAAGGAAAGTCA AACTTGATGGCAATCTGGAATATATGAATGGTGATCAACTATCCAAGTTA GCTAATAACAGTTCTTGTGGTTGTGGTTACAAGCATTATTGGGACGGAAA GGAGTATGATAACCTCCCTATCAAAATCCCTCTCGAACTTGAATGGGATG ATGAAACAGTTGATGATCACGTCTATTGGTTCCAAAATGAATCTGATCCT ACTCTCAACTCAAATGCTTTTGAACTTGCCCGAGAGAAAGTCCAAGAACA TTTCCCAGGGACTTTCGGTAGTGAGAGATTAGCTGAGAAAATAGTGGATA CTATTTTTGAGTATACTACTGCGTATTACAAGGATACATCAGTCGAACCA GAGGCAATGGAATTAGATGCACCAACATGTATCCCAACCAAGATTATCTT AACTGGAGAAAAATCCAAAACTCTACACAAAGAAGAATTGGGTGCCAGTC GTACTGAACGAATTATGAAAAAGAAAATCGAACATAAGGCGCCGATTCAA CAAAAGAGAGCAAGCACCTCTAATCAAATGGACAAAGGTAATGAGACTAA TGCTGTCAGTAACTCAACATCCAAATTATCCTCTGTGAAGGATCTAGGTG ATTCGCCTACCAGAGAAAAGGTTAAGAAATCTGAGACTACGATAAATAAA ATTCGTATTTCTTGCCAAGACAAAGGGAACACCATGTTCACATTAGAATC AACGACCTCCTTTGACAACTTGGTAAAATTTATCAAGAAACATTTCGACA TTGAGAATGAAGATATTACTATGAAATATGGGTTCCCTCCAAAGCCTCTC AATCAAAATGAAAATAATCCTGAGGAACCTCTAACCATGCTCAAAGCTGG AGATCGAGTTAATGTTATCATCGTCAAGAAGGTCAGAAAGGAGGACCCTT TACCATCGAATGATACACGATCGAATCAGCAGAAATCAACACAACAACCT ACAACAGACAAAATGAGTCAATTCGCCAGCCAATTAGCTCAAATCATGGG TCAGGACTTGTGGGAATGGGCTTGCTCCCAACGAAACATGTTCCAAGTTA ATGGTTGGATTTACAAAATGGCTTTTCGTGATCTGGGTCTTCTAACTGAT GACCAGCATTTGTCATTACCTTGTTTCCCCAAGAAGATCTTTGTTTACAA TAAGAAAGAGGATGAAATTTATCTATGTCTTGGTAAACATCATATTTTTG TTCAACCTCTTACTCGCAAAGAAGAGGAGTTAGCGGCAGAGCAAGCTGAA ACTAAAGCTCATGAGCTGAAACCATCCATTCATCATGAGTTGAAACAACC TGCAAATCAACAACCAGAGACTGATAATTCACCGAAAGTGAACAATTTTT CAGGTGAAGGTTATATGTTAGCTAACAATGAGAAAGCACCTGAAAATGTT CGGACCATTCGACAAACAATTGATTTTGCAACTTTTGGACGCGAGGATAA AACTATTGATGATGAACCCATGGTCGAGCAGAAGGAAAATGAGTCCATGG ATACTTGAGTAGATTGTGGAAATTTATGTTTGTTTGATATTTTGATATTT TGAAATTATATAATAATTTATGATGAAGTAGTTAGGGTACTATTATCTTT GCTACTTTTTGGTTCAAACAAGACTATCTGATATTCTTCTGCCTAATCAT TGTAATCAATGTAAAAGTAAGTATGCACCTTCCACCCACTGTGTACTGAA TACAATTTTTCTACAAAGTACTTTTCATTCTAATTTGTTCAATTCATTGT TTTCTTTTTGTAAATAGTTATTTGAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062437TCONS_00062437Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062437-proteinTCONS_00062437-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:335117..341194 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
VCPIP1deubiquitinating protein VCIP135 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.12 10.47 4.52 3.04 15.37 10.91 10.87 12.12 6.12 8.24 7.67 4.87 6.49 5.43 6.59 7.42 8.26 8.07 4.56 5.14 6.57 6.79 13.81 13.33 7.62 8.23 6.57 6.25 10.44 11.2