XLOC_039197 (gene) - C. hemisphaerica

Overview
NameXLOC_039197
Unique NameXLOC_039197
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_369:327398..330965+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039197 ID=XLOC_039197|Name=XLOC_039197|organism=Clytia hemisphaerica|type=gene|length=3568bp|location=Sequence derived from alignment at scaffold_369:327398..330965+ (Clytia hemisphaerica)
CTTTAATCTAATCCATCTAAATCTATTTTTTGTCTATATAATGAATATGA GATTGTGACTGTTAAACCTTTATTGAAGTATTTTAATTAATTTCGCGACT TCTATGAGTAGTATTTGATTTGATATTCGATATTGTCTAAGCTTGTGTTT TTGTGATCTGAATTTATATTTTGAAGGGCGAGTCAGGCTTCAAGTTCAAT TGAGtttaacttttttcaatatGGCAGAGCAAGAAATTACCGCAACAGAA ATCAAGGATGAAACTCTTGAAGAATATTACGAGCAATCCATCGTTCCACC ATTCCACAGATGCTATCACATCAAGCCTTTTAATGTTGTTTTCTCAAAGA ATTACCCCAGACATCATCAGTttattcaagattttgaagtttttaaagaT GATGTTTTCGTATCCACTTTTCCAAAATCTGGTAATTTTTGTGAACTGCC AGAATTCCTATGAATCGTTTTGTTTTAAGGCATGCGGAGGTTTATTTTGT CCTACTATCAACCATTATTTTCTTTCCATGTATTAGCTTTCAAATCCATA CATTAGGTCACAGTAGGTCAATGAAATACAGTctacgttcgttcgttcgt tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc gttcgttcgttcgttcgttcgttcgttcgttcgttcttgatattcatgat gtaatctttgcgCCTAAACAACTTTGCCGCCattatttgtggtaaaaaat ttgGCCAGCTAACctattttgtattgaaaccGGGGGTTCACGAAAAAGAA AGCCTAATAATTTGTGATGTAGTATGATAGAATTatatatctttttaaaa tctattGTAGATAATTTAATGAAAGagttttttcttcgttttggAGTATT TGGACTTCTGCAttaatcttttcctttttctttcggGGGTCCTTGCGTTG AAAACACCAAAAATGGCGGCCAAATGTTATGACTTGAAGTGTCAATCAAC GAAAATATTACATCATGAACATCGtgaattcattcattcattcattctca AAATTTGATAATACTTCATCATCACTTTCTACACGCATTTTTGTTTTCAG GAACTCGTTGGCTTCAAGAATTAATTTGGTGTATGCGTCATAAAAATGGA ATCGAAAAAGCGAAATCCAAAGATCTTGATGAGAGGGTACCCCATTTTGA GTAAGCCAGATTTCATAATATTATGATAAGACTACAATTATACAACATCA TTTCTAGCATTGATTTCAAACCCCCAAAGAGACTATAGATTTGAAACTCT tgaatgggaaatgaagccacttatctCCCACAAACGCCAGATTAAGAGTA AAACCCATcggtaaatttcaaaaataattgccgcttaaaacaaagaaagg gcTTGATTCAATCGTCATTCTAAATGCTGTGAAAATCTAAAGGCTTCACT TTCTCTTGCTccagaaaggttgaagattcctctctggCCTCTTTAGATTC AATGATTTCAAGACACCAAAATTATTATCAGTGGGTCATTACTTCCGCAG AGCTTTTTGGAATGATTCAAGTTTTCTGACGTTACTGCTTTTTTTCATTT AGACTCCCTTTTGTAATGGACAGCAAGTCTATTGAAGAGGATAAATCATA CCTCCTTAATGGAATAAACAACCTCTCTCGACCAAGAACGTTGAAAACTC ATCTACCTTTTCCGATGCTACCGAAAGGAGTACAAGAGAAGGGTGCtaag gtaaattttattgacttatcaaattccaaacattttccttgaaaaaatcA GCTAAGGCAGGCTCCAAAATTCATTTCTTTCGTGGTTTTAAGCTCAATAA TCCTTGCAATCTTTTAAACATGTTTGCTTAATGCACGTGTCGAATTCCCT TAGCCATGCCATCTCTGAAATCCGAGTCCGAGTCGTGTTCTTAAGTTTTC TTTAAGccgatttcttataaaaagaggcGTGTATTGACAATTCATTGATT GGAATAATTTTGTTTCATCTTCAGATCGTATATTGTTATCGCAACCCTAG AGATACAATGTTGTCATTGTTTAACTTCATGAAACTCATACAAAATTACA CTGGCACAATGGAATTGTATTCCGATGTCTTCCTGAAAGGCCTCACACCT TATTACTTACCCTACTTTTCTCAAGTTTTGGGATATTGGAATCGACGTTC CCAAGAGAATCTCTTGGTACTATGTTATGAAGAAATGCAGAAAGATTTGC CATCAGTTGTTCgaaaaattgcttcatttttggaCATTGAAATGACAGAT GAAGAAGTTTTGAAATTATGTCATCATACTTCTTTTgatcaaatgaaaaa gaacCCTCATGTCAACGTATTGAAGGTATTTTTTTGTAAAGGCGAATTGT TTTGTGTATTTATATAGcagattttctaaactttttaaacgcattactct cgggtacctaatagccggggggttggaataagcaggggggttggaaaaaa tctcaaaatttaataagcgggggggttggaataaaaatgtcatggatgga aaatgtttgaaaaggaggctaatacagcagaattaagacaaaaaagggaa cttttcccaaaaattaataagcgggggggggggttggaataagaatgtcc tggggggaaaattttcgaaaaattaaNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaattaattagca gggggggacggctattaggtacccgagagtagttgcATATTCCCGTAGTT TGAATCGcagactttaaaaaaaaatttgtctctaaaaatatttttcgcta gaggatgaacAGAAGCCTAACTTTCCCGGGGCCCTTAGAGACAGTCATGT CCTATAGAATTATAGACTTGGTATAAACCTACTTTGGCCCAGAAGATTTT CCTTTTAgatcacacccctgtctcggtgACTTAGTAGTGGGGTTAAAACG AAAGGGACTTATTCAGATAGCAATGGTAAGATCGTATCGTGTAAAGAAAC ATTAGAAACATTTAGAAGTTTCTTTTCTTAATTCTAGGGACTAAAAATGT ACGACGGACAATATTTGAACAAAGGAAAAGTTGGACAATGGAAAGATCAC TTCAGTGAAGAATTGATCCAAAAATTCGAACTATTTGAAAGAGAAGGATT AAAGGGAACTGATCTGGAGTTTGTTTTCGAATTATAAACCGGCAAATCGG CAGTTTTTTAACAAGAGCagcgtcaaaatttgaaattacgaTTATCTatg atgattctatcaaaagttattggaatttcaattttcatgacgtcatcaaa atagcgcaaaattgaggatttttgcgaattacgcaaaatatcaaaatgaa aaaaacatctgcctagactgaatcttattctaCTTAGTTCTACCAACgac ttaataaaatagatagaccaagaacttcatacaatggctcttagaaatct tttgttttctattcattt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062565TCONS_00062565Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062565-proteinTCONS_00062565-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_369supercontigscaffold_369:327398..330965 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SULT1A4sulfotransferase 1A4 Homo Sapiens
SULT1E1estrogen sulfotransferase Homo Sapiens
SULT1C4sulfotransferase 1C4 Homo Sapiens
SULT1A1sulfotransferase 1A1 isoform a Homo Sapiens
SULT1A3sulfotransferase 1A3 Homo Sapiens
SULT1A2sulfotransferase 1A2 Homo Sapiens
SULT2A1bile salt sulfotransferase Homo Sapiens
SULT1B1PREDICTED: sulfotransferase family cytosolic 1B member 1 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.24 0.2 0.26 0.66 0.25 0.37 0.52 0.29 0.51 0.15 0.27 0.17 0.2 0.1 0.17 8.1 8.94 0.36 0.35 13.37 12.9 4.1 6.65 6.19 8.5 9 5.27 0.16 0.19