XLOC_039442 (gene) - C. hemisphaerica

Overview
NameXLOC_039442
Unique NameXLOC_039442
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_375:559..3902-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039442 ID=XLOC_039442|Name=XLOC_039442|organism=Clytia hemisphaerica|type=gene|length=3344bp|location=Sequence derived from alignment at scaffold_375:559..3902- (Clytia hemisphaerica)
ATTTTCTTTTATGTATAATTGATTTTGAACTATTTTCCAGTGCAAAATGA
TAATCTATATTGAATAAAAAAATCAAGATGTACAACGGTTGGATCTCAGA
CAGAGAAGCTATTGAAAGTGAATGTGGTATAGAAAGTGTGTTAAATAATT
TCTCCTCTGGTGTTGGTCGAGATGTCACTGTTTCAATTATCAAGAGTCTG
GTTCACCAGAAAAGTGCTTCCAAAGAATTATTCAATTCTGAAAAGGACCT
TGAGTGGACTATGGATGTCATTTGTTTTGGTTTAACAATGCCACTGACAG
ATATGGAACTTGAAACAATCAAGAATTGTGTTTATCTCTACTTAGACTGG
TCTAGCGTTTTCTCTTCAAAACCGAAACCAGGCATTCCGTGCCAAATAGT
GCGCAATAAAGAACACTATTTCGCACAAATGTTGAAACATCTTACAAACA
TGTTCATACCAAGAGAAAGCTCAACAACAAATTACCAGAATAATTTCTGT
AGTCGTATTTTATCTGACATCAAAACTTTGGTCCAGGAAGGCAATATGGG
AAAGTCATCATCAGAGGATGTCTTGCGATTCTATTTAGGAATATCAGGAC
GTTTACTCTCTCAGCCACCTATGAAAGGTGGACTAGCAGACATGCTTTGT
GAACAGTTGATAAACTCTTTGATCACAGTTTGGTTACATGTTTCTTGTTA
TTATTTTCCATCGCCCACCCTCTGGTGTACATTACAAGAGGAATTCCAGA
CTTGGAGACACAACCATATCTTGATTTTACAATGGAATAAACTTACCTAC
GTTCTTACACGGAAAGTTTTAGCTATAATCTTTGGGCCTTCTTATCCACT
ACCTTCATTATACAAAAATGATCAAACTGAAGACATAAAATTACCTCTAA
ACATGTCAGATGATATTATTGTTCAATGCTGGTTTCGTTTTCTTCACTGT
ATGGGAAATCCAGTAGACTTAACAAATAAAATCATCATCGCAAATACACC
TAACTTTGCAATGTATGGTTTGGAACACAACCAAGATCCCGCATCACATC
CCTCTTTGAAGAGCCTACCTCAGAGCTTTCTGAAAGCTATGCAAGGTGTT
TCAGTACTGGTGAAAATGTTCCTTGGTGCCTCTATACAAGATACACGATC
CACATCTATTCTTTCTCAATCATTTCGAGGTGATCGGAAATCAGCAACTC
TTGGTCCAACAGAATCTCATATAGCTGCAGTGTTTGCAAACAAAGCTGCT
ACTGTACCTGGTAAGTGTTTTCAATTCAATATGATTGATTGATTTATTTA
TTTATCTTTCTCATAAAAGGTTCTTTTCTTTTTTATGAAAAGCTTTATTT
CCCATTTCCTTTTTTTTAGATTAGAATTTTTTAAGTTTTACCTGAAATTT
TGTTTAGGTGTTAGAAGAATAGCTGATCAATCCTCAGCAAAGACAGTCCG
TGATGACAGCAACATCACGCCTAAAACAATGAATGCCATAGCTGCTGAAT
CCAACTGTATTCTTCACTTGTTTGGTGGATGGTTGTTTGATGTATGTCTG
TCAGGAGTTGAACTTTCCAAGGTATTGGCTTCTGTTGGTGTCATCAGCTG
TGGAATTAAACCCCAATCGTATCACCTGAGTAGTGAAGATATTGAAGTCG
GGAGAAGGTGAGTTTTGATTTTTAAAGTATATTTTTTAACTTAATTTTTT
GCCTTAACTTTTCTATACTTCTTNTCGGGAGAAGGTGAGTTTTATTTTTA
AAGTATATTTTTTAACTTAATTTTTTGCCTTAACTTTTCTATACTTCTTT
AAAACAGAATCAAAAACAAATAACAAGCTATTTCTTTTTTATGCTAATTA
TAGCTTAGCAATGTATGGCTAACATCAAGAATGGCATCAAGATCATTTAC
ATCATTTATTCTATAAACTTTATTTTATCTTACTTTAAATTTGAAAGTCT
TAATTTAAGACTTTTTTGTCTTTTTTACAGCTTACCACCTGTTATTAAAA
ACGCGTTCGAACCAGGAAGAGCAGAAGCCTTCGGTACACTATGTCAAATA
TTTTGTCATGCTAATGTCAATGGACAAGCCATATTACCTGTCTATCTGTC
AAGATTTTATTTGACACTTGCTGTTGGTCTCTGCTATGGAGAGGTATTGC
TCCTCGTTTGTCTTTTATATAAAAAGCATAANGTTTTATTTAACACTTGC
TGTTGGTCTCTGCTACGGAGAGGTATTGCTCCTCGTTTGTCTTTTATATA
AAAAGTATAATTTTAAAATGAACGGCTGTTTAACTCCCCATTAATTCACT
TTTATCACAACAACATATATTAACACTTGCTACTGATCTTTGCTATAGAA
AGGTATTTTTCCTCTTTTATGTAAAACGTAAACATTTGTTTAACTTTCCT
TTAAATGTTAGTATTATTAATTGTTTAAACAACTACCGGGTGACCCACGA
AAAAGTATAAGAGTTTGGAGGGTAATTCTGTCGAAAAAGAATTGAATTTT
AGCTAAATTCTTTTTTCATGGTAGAGAGGAAAGGCAAACTTAAATTTTGA
TGTATCATTTTTTAATTTTGGAGAGGTAGTTATCGAGATATGGAGGTATA
AAGTCAAAAGTCATTATAAAAAAACAGTTAAAAAACGTCAAAAAAGACAG
TATCAAATTTGTATCAGAACAAACATCTTTCCTTTGATCATTTAATATTT
CTTTGAAAAAATAACAACATTTAAGTTAGTTAGTGGGTCACCCGGTACAT
CTAATTAAGATCAATGACTCATTATTTAGATTATGCCTAATAAGTTCTTT
CTTCATTTTAGACAAAAGCTGGACAGGTGCTTGGAGAGATTTTGTTGAAT
ATTACAGATATTTTGAGAATTGATTTACATGGCGTTCAAGTTCTCATCCC
AAACATATTACAAGCTATTGAGCTCATCCTGCCGTCAAGTGATATTTCTC
TCGGGTAATTAATTTATCAATAAAAATCTTCATTCTTGATATCGTGATTT
ATAATACTGTGTTAATGATTGTTATTTTTATCAAGCTTCTTAAGTAAAAG
AAAACAAACGCATCTTACTTTCTTGGTGCAATAAAAATGGTCTTAGAAGC
ATACTGGACTGTTTGTCTTTTAAAATATCTTTTTATAAATTCTCTTTGTC
CAAAATACTTTTCGTTTATGATATATGAATGAAATGATTAGCAAGCCTTT
TTCAAAAGATATGTTTCGCATGATACTTTTCTCTTACTCTTTAGATATGA
CTTATCACTGGTCATGCTGCGACGCTCCTGCATTCACATTCTACTCTCAA
TGCTTTGTTTACCATTGCATTTTCTTCAGCTGCCAATTCAAGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062972TCONS_00062972Clytia hemisphaericatranscript
TCONS_00062971TCONS_00062971Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062972-proteinTCONS_00062972-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_375supercontigscaffold_375:559..3902 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.68	4.91	3.63	1.52	15.44	15.13	17.08	17.09	10.4	15.33	16.79	7.66	11.02	10.57	8.54	8.66	10.31	13.74	5.77	7.38	9.91	10.41	6.13	9.24	18.19	21.94	8.79	5.36	7.34	9.93