XLOC_039645 (gene) - C. hemisphaerica

Overview
NameXLOC_039645
Unique NameXLOC_039645
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_385:461920..466058+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039645 ID=XLOC_039645|Name=XLOC_039645|organism=Clytia hemisphaerica|type=gene|length=4139bp|location=Sequence derived from alignment at scaffold_385:461920..466058+ (Clytia hemisphaerica)
ttgcaaaataaaaacaaaaagcactttcgttttcagtcaAACGTGTTTTT TTTACCAAAGAAAGATGGTTGACGCTGCGACTAAAAAAACTGTAGCTGCT ATTCCTCAACTCAAAACCAAAGCTGGTCCTAGNTTACCAAAGAAAGATGG TTGACGCTGCGACTAAAAAAACTGTAGCTGCTATTCCTCAACTCAAAACT AAAGCTGGTCCTAGGGATGGAGATCAATGGGTTGTCAGATTAAAGGAGGA GTATCAGTCACTGATTAAGGTATTagttatgaaatattttttcttttttg gagaCTTGTATCCCAGTCTGGAAATTGCGGCTTGTGCGCCCGGATATCTC TGGCGTAATTTGAGGTTTGAGATCTACTGCCCTCAACTTTGCCCAGTTAA GTTGGCGGAGCCCCAGCTTAACATTTTCCTTCTTTCCAGACTGGCTTGTA TCGCTCCCACAGACTCTAACCCCCAACCCcttcgcgtcaatttgacgtta gttgtgggaagaatcgatatgtgagtgacatATATATTTGTCTCAATCCT TGATTctaaggcttaggttttttctcatcttcaatttactgaagaaagca gggaatttgatgcaagagttagattgtcaacaaagtgccgtaaaaaatca ttgaataaaagaagaactttaaatctttaatatttccattttgaagaatt ggtgcaaaaaagtgaaacatggaaaagtttcatttttcattggttTAATT GAAATAGTGGATTTGGAAAACTTcccatgtttgtttttttgcacaattcc ctgtaactatgggcaaccACCTGGTTGCTAAGATGATGGCTTGAAATCGA ATGTGAGACCacagaaaacgaaagtaaaatcggcccgtactcgaaatcct gtaatcttgatatacaagtttaagtctatactggctatgcatgtttgcct ccgctggatgcaagttacccgatctcacggtatccTCTTATTCCTGATTT TCTTTTTGAGGTCCcaaagagaaaaattttgattgaaataccGTTTTGCG AGAAAAACGAAATACTAGTGAAACGCCTATTAGAGAACCTTTTACGAATA atacttttgattttattatcaAATGGTCAACTAGAAAGGTGAAATCTTTA TTCCCTTTAAAAGACAAGAACCCCGTACCCAACCTGCAAAATTTACCAAG GTGATTGTTCTTGTGGTCAAATATTTACATTGGTGAAACTAAACGAAACG TCGCTACAAGATGGGGAGAGCACGAAAATGTCACTTTAAAATCAGAGCAT TTAAATTCCTACCCAAATCACAAatttcaatggaaaattgtCCTCAATGC CCCCAAAGAATTGGAGAACTCTGAACTGAACTgatattttaaatgatttt taattttcaataattttgtgCTTATGTGACAATGTATCATGTTGATTTTG TCAATAGGAAAAACTTTATCCTATTTAGATGACCttgtttattgttttgt ttaagaactttcaagcaaaatatttttttattttcggtTTCTTGGAAGTT GGGTCTACATTCTTATAATTTAGCTGGGGGCTATTTTCATTAACTTCTCC CCCTGAAAATCGCTGGGGGCTTGATCCCTCTGTATActataattttgttt tgaacgaaaaagaacattttatgaTAAAAGTTActgttttttattctttc agtATGTCAGTACAAATAAAGATCAAGACAATGATTGGTTTCGCTTGGAA TCGAACAAAGAGGGTACAAGGTGATATTTCTTTATTTAGTAAAATCATCC TACCTTTAATAAAAAAGTGTTATTGCTTTCACCTGAAACCAGGTTTCAAA GGGAAACATTCGGTctatagaaatattttattcaatgattATTATCAACT TATTTGCCAAGAAAGCAACGATTTCTACTACTGTAGGGTCCACTACTAat aattaataattaattttacgATTACTCAACTTCTTCATTATTTTTAGATG GTGGGGAAAATGTTGGCATATGCACAATCTTTTGAAATATGAATTCGACA TAGAATTTGATGTAAGTTATCATCTACTCTGTGTTTTTGTCACTTAGAAA AAGGAAAGATATTTTATTAAATAAAGAGCCAATTTGGTTGAATAGATTTG GAAATGCAAAGATTCATTTCAGCAGTataacctttttttataagaacatc ccaaatttttgaagccttcggatgttcttaaacttTACTGACCTCAAAAT TTACGATTTTATAAACTCTTACAATGAACACTTTCAAGAATCGAGTATAA AACTTAACATAAACTGAATCTAAGATTAAGTGAATCGGCTTGAAGCAGAA ACTTACTTAAAGCTTCGTTTCTATAAGCTATACAGTTGACTCGCTCTTGA ACTTCAATGGACCAAAACTTTTCTTCGAACGACACAAAGTTTCGAACTAC ATACAAAGAGtaatttggactttttcagAATGATTAAAAGAAGTATTTAG AATATTTCAGTTCAAATTGACGAAAAATTCCAATAATAATAGACCTTCGA ATTTGAGAGAACCTCTTTTCCATATCTGAAACTTtatgttttgctttttc tctCAATCTTAGATACCAATAACATACCCATCGACTGCGCCAGAAATTGC AATTCCCGAGCTTGATGGAAAGACTGCTAAGATGTACAGGTATGAAAaga tccttttttttttttgcattcatATTTTCGTAAGTATTGTTTGGTTAGAA TTGATTTACTTTAATTACCGCATTCACACTTTAATGGTTATGTTTTAGGA CCTCCCTTTATTAATAAACGTTCTGGCGAAAATCTCCCAGTCAATTTTGG TTACTcatcaacaaaaatattctcTTACTCTTATTGTGTGAAAACTAGAT AGAATTTCGCATCGATTGACTGATGGATTTCAAAATacaatcaaaaaaat atatgaaatgataaaaatctacgaaaaagggcgatttttcaaaaaattct aattttttctgaatttggcGGAGATTTAATCCGccaaattttgctaaaat ttcgcCAAATTTTCTCCTAACTGAATCTATGCCAAAATTGATCCAGGTAA TTGAACCGTACATTGTTACCTACATTGTATTTTGGGGTCCTGACATAAAT TTTGGAATCCTGACATAAATTTTGGAATGGGCATAAAATGCATTTTAATC GATGATTAAAACatcataaataaaacaaaagcaGCCTATGTTTAAAGTGG TCTTTTTGtggcaaagaaattttgtttttaactttttattttcttttttc aggggAGGCAAAATTTGCTTGACGGATCATTTTAAACCGTTGTGGTCAAG AAACGTTCCTAAGTTTGGCATCGCACATGCAATGGCACTCGGTGTAAGTA GTCATTAAGACATttagaattttcagattcatcaGAGCcaccataactcg aacaattttccattggcTTTAACTGTTCACTCTTTTTTCCTCGTAACGCT TTGGTTTTCACATGGAAGGAAAAAAGAATGCACGCTCAAAGCGAATGGTC TTCAATAACTCTCGAATTTTCCATTTACATACGGAACAAAGTTTTGTTAC CCGGTACATGATGTTAACACCCTTATAGGCtgttgcctggaattccaaga ttttttctctAACTGTGAGATTAATTTCGGCAACATGTTTCAAAAATTAC ATCTAGACTTGTTGATTTattgcttgaaatatttttgaattcttcttaat ttttttaagctCGGACCATGGTTGGCTGTCGAAATTCCTGATTTGATCGA AAAAGGTTTAATTCTTCACAAAGAcgacaagaaagaaaaaacgtAGAGAT AATTTTTTGGGTATAGTAGGTGGCTAATTgtaattataatttttgtaatt aaaggAATTTTTAATTGAAGTACCAAAACAACAGTATTTATTTTGATACC ATCAAGAATGAGTGTTTTTTGTTTAGTTTAATATTAAAGCTtgatgaaaa acattttattaaataaataaatacatgtaattatttttgaaattcttcca tctttgtttatttgaaattaatttcattGAAGATCATCTAAAATTTAGTT CGATCtatgtaaagaaaaaaaaagattctgaCATTGACc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063262TCONS_00063262Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063262-proteinTCONS_00063262-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:461920..466058 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UFC1ubiquitin-fold modifier-conjugating enzyme 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
175.33 181.87 178.1 182.74 79.01 63.51 128.64 136.41 79.51 89.43 48.86 43.39 30.23 25.96 33.08 36.11 52.51 44.41 20.49 37.97 37.31 34.25 65.96 57.57 40.66 39.83 45.49 25.47 47.41 37.08