XLOC_040156 (gene) - C. hemisphaerica

Overview
NameXLOC_040156
Unique NameXLOC_040156
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_407:388474..396035+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040156 ID=XLOC_040156|Name=XLOC_040156|organism=Clytia hemisphaerica|type=gene|length=7562bp|location=Sequence derived from alignment at scaffold_407:388474..396035+ (Clytia hemisphaerica)
TGGAAATCAAACACAGAGatcatttctttttttgaatggTCGGCAACAAG ATGACGACTCGGTTTTCGTTCAACAACTTGTTGATTTTCATTGCAGCCTT TGGCGCTGTCTCTGCATGGACCAGGTAAGCCTTTGATACATTTTagtcat cattttttgaaactttattttAGGAGGGGGGAGATGATGAAAGTTCGCTT TTTGAATCTTACCTGGTTAGTTGCAGAGTTATCTTTCGCTGCTAAAAGAA CTTAAACAGAGAAGATACTGTATTTATAGCTAGTCTCTCTGGAGCCTTTT GGAGTACTTTTAGTGATTGTCCCTTAAAAGCTTATACCAGATCATGTACA AATCTAGTGAACTGCAAAGAGGTATACAATAGTAATTGGTGTCTTGCGAT TGTTTATAGGAACTATAGGAATGGCGGCCCCTCGAATCAGAACGCTCCTG ACAACGTGTGGAAATGGGAATGTAGTCACGAGGCTATTCGAAATCTAACC GTCATACCAAGATGTAAAAAAGTTCACCGAAATGAGGCTAGTTCAAAAGC AACAGAATTGAGTACCTGTAAATTAACTTGTGGTGAAGCATCAATGCTCT TCCCAAAGCCCTCAGGTATGGTTTGATTATTTGGTAGAAATTCTTTCGAA AGGTCTCTCCTTAACCTGATAAGTAAACTTTGCCACTTTAAATCGTGAGg tagaaatgaaaaagatttgtTTGCAATGTTTCCGACAGTATCGCTAGAAC GGTGTTTAAGCTAGTGAACAATTTTGAAAGCCTCAACTAATACTTTCTTA CTTTTCAGGAAAAacaaaattgagcaaaaaagTTGTCCCCTTCGCACCAT ACCGTGTCAAATTGTCGTCACTGAAATTATCGAAAAACGGGAAATTCACC CGTCGTGTCAACCAATTAATCCGATTCGCATTCGGTTCCTTCAAACGCAC CCTCCATCAGGGCGTTTACCGCCAACAAGTATACAGAGGGTGGAACTTAC AAGGCCGTACAATAGAATCCTCTAAAAGAAGTATGGAAATCTCGATCATT TTGGAAACAAATGCTGAGAAACTGACTTTATACACAGACGAAAGTTACAG TCTTAAAGTGAACACCAACAACCGCCTCATATCAGTCACAATCAAagcta aaaatttctttggagCACGACACGCTTTAGAAACATTGTCACAGCTGACA GCTTATCATCAAGGCCATAACTCATTGCAAATCATTGATTATGCTGACAT TTATGACAAGCCAGCTTACCCTTACCGTGGTGTTTTATTGGACACAAGCC GTAATTTCTACTCCGTGCCAAGTATAAGGTAAATGTGATTTTCTTTCCCA CAAATCTGAGAGTGAGAGAAAGTCTAGCCTGCTAGATGACTAAGACAGAC AGAGTAAAatataaacagaaaaaaacatggAAGGGTCAAACTAATTCTAT CCCGTAATTGTACACACCGATCATAAACAACTCTACAGGATAACTAAAGA CTTTTAGACAGCCTTTTTGTTGAACCCCTGGATAGTAGCGTTAATATCTT CAACCACTCAGCTTTAGCTccatttcaaaattgttttgtttttcgctTAC TTTAGGAGACTGATCAAAACAATGTCATACAACAAGCTCAATACGTTCCA TTGGCACATCACTGATACACACAGTTTCCCAATCTTCATCAAATCCGTAC CACAATTAACACAATACGGAGCTTACTCAAACACCAGAGTTTACACTCCA CGACAAGTCAAGCAAATCGTTGAATACGGACGCCAACATGGTGTTAGGGT CCTTCCAGAGTTTGACCAGCCTGCACATACAGGCGAGGGTTGGCAATTCG GTGAAAAAGAAGGTCTAGGTAAATTGGCAGTGTGTGTTAACAAAGAACCA TGGCAGAAGTTCTGTTTGGAACCACCATGCGGACAGTTGAATCCAATCAA TCAGAATCTCTATCATATTTTATCCAAGATTTACAAGGAGTATTTTGATC TCTTCGATCCAGATTTGTTTCACGCTGGTAAGTTCTGATATAATATTATT AAATCATACGTCTCTTTAGGTATAGTTATTGTTTTGAGCTCAAATCACTG GCATTGCTAAATATATCTAATGGTTCCTAAACCTATTTCCCAGACTTATC AAATAAGTAGAAAAGGAAGCGAAGTTTGCTGGTGAGGATACTTTCTGTTA AAGCATACTTTGTTTAGGTTTCATCAACcaagaaaaattctattttgcCT AAAATAGACTGTAAAAATAATGTTAAATCTTTTGTATTTTGCACGCATTT TCTAATCCACAAGATACATGGTCGAGGGCATATATGAGAGAACAAAAGAG CGAGGATAAACGGATCAGGAAATATaaaagatttttcgattttctccTAT TTTGCTGCGGGAAAtgaataaattcttttttcaaaagaaaacataaacat GTAAACATCTCTTTTCGTCAACAAATTATATGAATGGTTTGGGACTATTT AGCATTTTATTAGACGTTTCGTTAATCCTGCTAGCTTTAGTTGCCAGTGG AAAAACACCCAGAGGGATAGATACAAATTAATTAGTTTTGGATGTTTTgt taagatttcttttgttcttcagGTGGTGATGAAATCAACTTCAATTGCTG GAACACAACGAAGGAGATCACTGATTGGCTACACACAAATTACGGTGGCc gaaatgaagaagaaatgaTGAGAATGTGGAACCTTTTCTTAGAGGTATAA TAAAGAATCGTGATTGTAATTGCTTATCGAATCTGGGAAGATTTTCCTCC TTGAAAATTAGGTCAACGACTCAAAGATTGTGTTGTTTTCTACTGACTTA TTCCTAACAGGAGCACAGAAAATCCGGAGGACGACTATATTCCGTATTTC TAAATATAACTAAGAAACTCTttctagtagggggaaatttgttcgttttt ttgaggtcgctcgatttttttagtcaaagcacttgttatacgtttttgga aagctaaggggtaggggaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNttgattcccctaccccttagctttccaaaaatgtataacaag tgctttgactaaaaaagtcgagcgattttacaaatttccccctactattc gtTTGCTTTTTTGGGACTACGATATCTGTACAATCTCGAAACTGAACAAG ACAATCAAAGAGCGGGGAGCGGGCTTAGGCTTCTCTTCTAACAAAAGTTC ATTTACGACTATCTGTAAAGGGTTCTAGGGTAATTTCCCCCCGTGACTGC CCCCGGATAATTACTCCCGGATAATTGCCCCGGGACAGTTGCCCCCGTAC AATCGCCTCCTGGACAATTGCAACCCAGACAATTGCCCCCTGGACAATTG CCCCCCCAGAtgtcaaaagtaaaaaaaatgtcaaaatttatgGTGATCGA GTAACTCGATTTTAgccttaatgttcttataaaaaatctcatctttgaaa tatcctgaatttttttgaagtttcatgaatgaatgaatgaatgaataaat taaTCGCACCTGGGTTTTCTCGGAGCCAAGAATATTAAAGCGAGAACATG AAAGAGTGCCCAACCATTGTCCCACCTGAGCGttccacctgagcgtccca gcATCGTCCCACTtaagcgtcccacctgagccaccgtcccacgtcccact tttCCAGTAAGCCGGCCTCATATcttcttttgttgatttttNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGTCACGGGGGGCAAT TGTCCTGTCACGCTGTAAAGACATACAGGAAATAAGCAGGAGCGGGGAAC GGGGTTTATGATTGGTTTTGGAATGCGTAGGCTTATTCTAACAACGTAAA TGTTTCTTATGGAGGTTATAGATTGCGTAATATCACACTCGCTGATGTTT TAAATCCAGAGCTATAATTCTATTCTTTGTTGCTTTTTCAGAAATCATCT AAAAAGATTTACGAAGCAAATGATGGCAAAGAAATCCCTCTCATCTTATG GACCAGTAAAATGACAAGCATCAAATATTTGAATCGATTCTTAAACCCAA AGCAACACATCATCCAGATATGGACATCCACAAAAAATAAAGGTAAATTT AATGGAGAGACGTTAGAGGTCGAGAAGTCAAAACATGGACTAAATGTAAA ATTTCCATGCCGTCGAATCTCAAGCAATTTTCTTAAAGTATTTCTTTGCA ACCATTCAGCATGACTTTCCAATCCCGTTTCTTCTggaaaaattactaaa atagTTTGGAAATAACAAAACAGATGAATCATAAACGGTGTCTCTTTCTC CAGGTATTGTTGATATTGTGAACAGTGGTTTCAAGACTATCTTTACCAAT TGGAACACATTGTATTTGGATTGTGGAGTCGGAAGCTGGGTAGGCGAGGT ATGAAATAAATCTTATATTGTCTCAGTTATTCAGTCTTTATTGCCAGACC TCCCGGGGAACCCAGCAGACACACAACGCTGTTTCAACGTCTATCTAACG TTCACtgcgtccatataacgttatattaacgtttaaaaaacgttgtgtgc cagcttggaaGGTGGTTAAACACTGAAAGTAGCTGCACCCTTTGATATTC AGTGTGTGGAATGTGATATATGGTGGTCAAGTAAAGAGCAATTTGGTGTT GTCATTGGAAAATGACTGACATAAATTCATGCTTTCGGTAAATTTAGTCA AAACTAACAGATTAATAAGTACATAAAGTTTGCGTCATTTCATCTTTAAT CTTCCGGCCTTTCATGATTTCCTTGTCACTATCATTTATAGGTATATCTA AAACTATCAATGACATCCTGTACGCATAAACAGCGATTCATTTGTGGTTT TCTCTTCCTAaagtttgtgaaaaattagCTTTCCGTTTTAAAAGCTAATG AAGTAATTTGTTACACACTCTGTGGCCAATATTATCAGGTGTCCCAAAAT CAATCGAAATATTTTCCAGAAAACTGAGAGACTGTCACTGGTTTACCATT TGTTTGATTTCTCGCATTTATTATGTTGCGTACAGGGTAACAACTGGTGC TCACCGTACAAAGACTGGAAACAACTTTATGATAACGATCCaatcaaaat cttaaaagatCTCAATGTTAACGTCACCGCACAAATCCGAAAGAATATTT TGGGACAAGAAGCACCACTTTGGTCGGAACAGGTATTGTCCAAACCACTT AGTTTCAGATCTCATTGAAGTTAGGAAAGATAATTGTGTTAGGAATTTCT GAAATCTCTAGGTTGAAAATAAACATCAACCTTCACCACTAAGCATCCAA GTCTTTTCCAAGTCGTCAGTTAGACCTCTGAGGAGATGCTTCCCTTTAGA TCACGGTAATCTTAAGTAAAacgtttcaaaattcaataaatacaaTTTAT TAcatataagaacaaaaaggCTTCGATCACTGAAATATCAATAACAAATT ATGAACATTTTAACATTGCTTCTGCAACACCAGATATCTTAGGAAAATTA AcataaatactcacaaaatgggtgaaaataagaatatctgGATGcttaaa aataaacgaaaattttcttttcaatcagGCTGACGAGAGTGTTTCCGAAG CAAAAATCTGGCCCCGTGCTGCCGCTTTAGCCGAACGTCTATGGACCAAC CCCGAACACAATTGGCGTAAAGCAGAATACAGGCTAGTGTACCATCGTCA GCGTCTTGTTAATCGTGGAATACGGGCTGATGCTTTGCAACCACTGTGGT GTAAACAGAACTCTGGACATTGTTACTATGACCCAACTGTTGTTTGAGGA TTTGCCGAATGAAGGATAACGGCTGGCGACCCTTCCCCGGTCgaaattta atcattttttttatgttttacaatttttagtaaatatttttgtatttttt aaactAATTTTGTGTTATTTTCAATACATCATTCAAAAGAAATACTATGC TTCAAGTTCTTGTCTTTCTGAGATCAATTTTAGAAGCCGTGTTTTTCTAC GATGGGGGCAGTTAGCGTTTGATTTGCCTATATTCTGATTGACTgaagac gacggtaaatcagcacttttaccgccCTATAAATTACCGTTCAAAGCTGC GGGTTGTTCCATGTGATAGTTTCAGCCACCCTCAAAAGTGTAGATACAAA CAGAAACTNCAAGGTTAATGGCTGGCGATCCTTCCCTGGTCGAAATTTAA Tcattatttttctgttttacattttttaataaatatttttgtatttttta aacaaattttgtgTTATTTATATCATTCAAAAGAAATACTATGCTTCAAG TTCTTGTCTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064048TCONS_00064048Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064048-proteinTCONS_00064048-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:388474..396035 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0.07 0.04 0.08 3.31 2.21 18.43 19.75 8.06 10.62 1.57 4.68 65.86 42.08 61.74 78.57 8.85 19.73 0.54 0.26 0.07 0.13 0.17 0.06 0.5 0.35 0.4 0.29 12.06 5.74