XLOC_040497 (gene) - C. hemisphaerica

Overview
NameXLOC_040497
Unique NameXLOC_040497
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_419:368349..372035-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040497 ID=XLOC_040497|Name=XLOC_040497|organism=Clytia hemisphaerica|type=gene|length=3687bp|location=Sequence derived from alignment at scaffold_419:368349..372035- (Clytia hemisphaerica)
CTAGATTCAAACCTATATTTTCAAAATATTAAATTTATAGTTCAGAATGG TAAATGTCAGCCCAAGTGACAAAATCCCACTTTATGAGGGCGAAGACACC CATAAAGGGAGAGCAATGCCAGAATGCAGTCACACGTTTTTATNAATGTC AGCCCAAGTGACAAAATCCCACTTTATGAGGGCGAAGACACCCATAAAGG GAGAGCAATGCCAGAATGCAGTCACACGTTTTTATACTACTTTAAAAAGA TTTGTTATACACATTTACCAATACTGACCTGGCTTCCAAAATATAATTTA CATAATTTACAATGTGATCTTATTGCTGGGATAACAGTTGGTTTGATGGT TGTACCTCAAGCATTAGCATATGCTTCCATTGCTAGATTAAGTAATGAGT ATGGTTTGTTTTCTTCATTCATGGGAGTTTTTGTTTACACTCTGTTTGGG ACATCAAAAGATGTCACTATTGGTCCTACAGCTATTTTATCATTGATGAC CGCTAGTTATAATGTTCCTCATTGTGTTGACACTGCAGTTGTTTTATCAC TGTATGTTGGTATTATTTTACTATTGATGGGCATTTTTCGACTTGGTTTT CTGGTGAGATTTGTATCTGTTCCTGTTATTTCAGCGTTTACATCAGCTGC AGCTCTGACCATAGCTTGTGGTCAATTAAAAGATTGGAATGGCTTGGAAC ACGTCCCTAGAGACTTCTTTGGTAACTTAACCTATATTTTTAAACACATT AAGGAATGGAATACCTATGATTTAGTGTATGGTTTAGTATGTGTTGTAGT TTTATGTTTGATGAGGCTGTTGCCACGTTTGAATCGCGTGCAAGAAGACA CACCAAGCTATTCACGCCTTCTTCGAAAAGTTGCTTGGTTCTGTGGTATT GGTAAAAATGCAATCGTGGTCATTTTTTCGTGCCTACTGATGTACATCTT CTCAATCTACAAAATCAATCATGATTTCACCCTTATTGAAAATATCAATG CTGGTTTACCACCTTTCAAAGTAAGNTACTGATGTACATCTTCTCAATCT ACAAAATCAATCATGATTTCACCCTTATTGAAAATATCAATGCTGGTTTA CCACCTTTCAAAGTAAGTGTCATATACAGATTTTCATTATTATTATTTTT TTTTTTTAGAAAAAGTCAAAAGAAATGCTTTACTTCATGAAGCCTAATAA CACTTTGCCATTGCTCATATGCAATTGTGTCTTTTAAATATGAGCATTTT ACGCCCTTTTCTCAGATCTCCCTCTCCCGGCCCCCTGAATCTTTCTTAGT CTATCAGAATCCATCATTACCTTTGATTTTTCATCACTTTTAAGGTTTTA TTGATTATTTATTCAGGGGGTGTATTGTATTCATTTCTTTGGTTTACCCT CTAGTAAGACGACAAAGCATTAACAATTAAGATACCCACTAGCTTACTCC TTTGTTTACTTTTAGCCACCAGTGTTTCCCTTACATTGTGATATCAACAA GACGATCATAGATGATGATTTACCTCAATCAATATCAGTTGTATCCTTCA CAGAAAGCGTTAAATATTTCAGTACTGGCCTAGCTGTCATTCCTTTACTA GCATTTATGGAAGCAATGGCTATTGGGAAAGGTAAGGCAGTTTTATTTAT TACTGAATTTTGACAAGTGTATGTTCTTCTTTGATAAAAGATGTTGATTT CACCCTTACACTAAAAACAACAAAAACTATAACTCTGTAAAATATACCCT CAAAAAAACAAAGACAAAAAACTCTCAGACATGAACTGATTGAAACTTTT ATATTTATAATCTTCATAGCATTTGGTCGTATAAACAATTACAAGATCAT ACCAACACAAGAGTTGGTTGCTTTAGGGGTGGCAAACCTGGCTGGTTGTT TTGTTTCAGCCTATCCAGTCACCGGTAGTTTTTCCAGGACAGCAGTCAAT TCTCAAAGTGGTGTCAAAACTCCTTTGTCTGGTAAGTGGCGATTGGAGGC CCTTTTTGAGTATGAGTAATAACGGAAAGGACAAATTGTATAATCATGTT AAACAATAATCCCGTTACGATTATTGTATAACATTGAGTCTGAAGCCCGA TTGGCTAGAGTAGATTCTCTAAACGCGTCTAGAACACGCCGCAATCATGA CGACGGATTGTATCTAGCGGTTCCTTTGTTTTTGAGGACTCCATTTTTTG AAATCTAGCGATAGATTTATTTTTCAATCCGGCGTTTGTGTAAAATAACG CGCGGGCGTTCTGGATGGGAAATACTAGTGGCCTCATTTCCCATCCAGGA GTCTCAAGTCTAGCAGTTCGGGCTTGGAAATCAATGTCGTATAATCATTT AGCACCTGCTGTGCATTAAATGACCCCAGTTTAAAAATAAGAGTTTCATA AAATTACTTCTTTTTGAACTCTGTATTTTCTTTTTCTAATAGGTATATTC TCTGGTACCATCGTTGTGCTTGCTACACAATATCTGACGCAGTATTTCCA CTACATTCCGAAAGCATGTCTTGGATCCGTCATTATTTGCGCAGTCATCA ACATGGTAGATCTAAACATAGTTCGATCCATATGGAAAGTCAACAAAATC GACCTCATCCCATACACAATCACTTTCTTAGCCTGTTTTTACACACTTGA AACAGGTTTGATCCTTGGTATTGCATCCAGTCTAATCTTATTATTAAAAT CAAGCGTCAGCCCACCATTACGCGTAGAACAAGGCGATGTGCAGGTCATC ACAGTTCAAAACGGAGTCTTGTATCCTGGCATTGAGAAAATAGTAAACAA AGTTGACGAATTGTTTAGCCTGAGTTCCTTACCCTCTGCTATAGTGTTAG ACTTGAAAAATGTTGTTGAAATTGATTACACAGTAGCTGCAGAGCTTCAC GAGCTTGTCTTGCAGTTGAGAAAATGTGTGAAACAAGACACCGATTTTTG GATTATCAATGCTAATTTTCAAGTGAAGAAAATTTTGTTGTTGTCTAATA TGCAAGACACTTTGACAACTTGGGAACATTTGCAAGAGAGCTATGCTGGT GCACGGAGGAACTCCCTTCCTTCAATGACATGATCGCTGTCGTACACGTT TTTATTAGAAATGTAGAAAATTTTTTTCGAGTCTCGGAGGTTCTAACTTT TTGGAAACTTGAAACCTCAAATTGTTCTTATCTTGTTCTTGTTACTTCAA CTTGGAGTGCTTTAGGCTTCTTACCTTATTTTTGAAATGCAGCCATTGCA GACTCAAAGTTGTTCTTAAACGATCCTTATCCTTTGACATTTTTAAGCCT CGGGTTTTTTTTTTGATTAAAAAGAATTTACCTTTTCATTCTGAAATTCT TTGTCTGACGTCTGTTCAGTCTGAAATCTTCAATTGAAACGTATTTCTGT AAACTTAAGCTGTTTCTCACATGTATTGTTATAAAAATTAGAATTTTGAA TGAGGTCACCAAACCTTACAAAATGTTATCTCGAAGATTTCGTAGAAATT CGTAGAGGTTTTCCGGGAGCCCTTGTATAACTATGACCTTTAGGCTTATT AAAAGGTGGATTTCAGCAGAGGATTGGAAAATACGAGTTAAAAGGCACGA GTTAAAAAACACGAGTTACAAAAAACACGAGTTACGTTAAATGTGACGTC ATCAATGGGAAATTATGACGTCACAAGTAGATAATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064578TCONS_00064578Clytia hemisphaericatranscript
TCONS_00064577TCONS_00064577Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064578-proteinTCONS_00064578-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:368349..372035 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC26A11PREDICTED: sodium-independent sulfate anion transporter isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.61 7.17 7.32 7.16 4.59 3.17 3.41 2.91 3.23 3.86 5.85 2.64 5 4.61 3.45 3.4 4.35 2.81 4.44 5.45 5.49 6.17 5.95 6.17 6.12 6.96 4.29 4.38 5.74 5.37