XLOC_040601 (gene) - C. hemisphaerica

Overview
NameXLOC_040601
Unique NameXLOC_040601
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_423:210117..214066+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040601 ID=XLOC_040601|Name=XLOC_040601|organism=Clytia hemisphaerica|type=gene|length=3950bp|location=Sequence derived from alignment at scaffold_423:210117..214066+ (Clytia hemisphaerica)
AACGCTCATAATGTAACTTACCATTATAGAGCCTCTTGACGTTTGTTCAG ATTTTTCTCTATGTAtcataaaatcaattttctgttgCAGCAATAAAAAA CATCAAGAAAAAAATGGATGATTTGAAAGAAGATGATCCACTCTTAGACA CAGATGAAGAAGATGAGGATTTTATTCCTGATGACGAcgacgatgatgat gatgaagactACGTTCCAGATGGTATGTTCCTCTAcacattctttttata agcaacaaAGTTGCTAAGAGGCTCGAGCCCTGAAATTAGCCAAATTTTTT AGTATTGCAAATGATAGGCCATGACCCAATAAACATAATATCATAGTGTC CTAGTAGGTTGATTCCCCtcccttgaaaatttcttttttgattttttgct cataACATAATACTGCTTCTATTCATGTTATCTCGTCCCTATATacaaag aaaaatgtaaatTGTCACCACCTCGAATATAAAACACTATAACATGTTTT TAGCTTGAAGTTGAACAGAtatgttttatgttttatgtttGACACCAGAG AACAGAAAAtcttttcctcagatttttttCTCCCCACCCTTGACTTTTTG GAGCTATCTTCCCCCTCCTTTTGATTGCCCCCCCCCCCCCCCATTTTGAA TGAACCCTTTTCCCATTTTTTTCAAAAAAACCCCCCCCCCCCCTTTTTAA AAGGGGGGAGGACACTGAATATGGTATAATATCAGGGGTGGTTTTTTTCA GGACATTCCGATTCGGACCCAGACTTTGGTTCAAAGAAACGAAAGCGCAA AACTTCTTCGTCTTCATCACCAAAGAAACGAACTCGAAGTTCTTCCTCTG CCGCTGCCAAAAAGTCACcaggaagaaaaagaaaaagttcttCCAAATCT CCAGCCAAGAAAACTCCTGCGAAGAAATCACCagccaaaaagaagaaaac cacAAGAGGTTCAGCCAAAGCAGCTCCTTTGTCACCCTCGCTTAGAAGGT GAGAAAACTGCTTCTCAAACAAGTGCAAATTGTATTTGCAAGATTTTAGG TCTGGTTCTTAGagcaaataattttattttaatctaAGAAAGCAAGTTTT CGATTACGTCTGAgggcgacccaaaggctcccttttctctagctgtgTAC CCTtaggtaggggagggtgccactccTTTCACTGGATCGCTCTTTATTTT AATACTAGATCGTGGAAGTAGAAGAACAACCATAGAAAAAGAGTTATGAC AATGTTTTTTTCAACACAGTTTAGATTGTCTAATTTCATATGTCCCAGCC AGTtgggaatttttttcattgttccTTTTTTATTGTACACTAGGAGTTCA CGTAGCTCGCGCGGACGGATAGTTTCGTACGCGGACGCGGACATATCAGA GGAAGAACACTTGCAAGATTTGGAGGCGTCTAGTGACTCTGAAGATGAAG TGAAACAGATAAAGAAAGCGAAGAGAGAGTCTGCACGAAAAAAACATGTG GATGACTTGTGGTCGTCCTTCAAAACTGATACTGCTGACGCTGGTTCGAA GAGGAGGACGCGAGGAGCAAAGAAGGAAGAGGAGAAGAAGCAGACAGAGA AAGAGGAAGAAAAAGAGGAAGATAACAAAACACAGAGTAAAGACACAAAG AAAAGCGAAGCGTCAAAGCAGGAAACTTCTAAGGACGAACCCtcgaaaaa agaagaagaaatttcaGAGCCACCAAAAGATGAAGCAAAGGAGGGCGAAG GAGAGTCGAAAGAAGCACTTTCTAAAACGAAAACTGAAAATGAACAGTCG AAAACAGAAGATGATAAACAGAAAAACGGCGATAAAAAAGAAGAAGTGAG TAAGGAGGAGagcaaggaaaagaaaaaggaagataaAGGTGAAAACAAGG AAACAACAGAGGAGAAAACTGACTCCAATCAAAAAAGCGAAAAACCAAAA AGCTCCGAACAAGTCAGCGAAAGCACAAAGGAAGCGAAACAAGAAAGTGC CAGCGCAAAGGGCTCCAAACCGGAGGAGGCCAAGACTGAGGAAAGGAAGC CTTCTGAAACGCCTTCCACCACGACCGCCACCGCCACTCCTTCAACAACG CCATCTGAAAACAAACCCATCTCCTCAACTTCTTCTTCTACCGCCAACAG CATTGCCAATAACAATGAAATAGTGAGTCttgttttgtaacttttttacc AGTGCCCTGCAAAGAGGAGGGTGAtgattttcattcttttttcttgCAGA AAATGAAGACCGAGCTAATGTCAACTATTTTAGCAGCGAGTGGTTTTGAA GGTTTGCTAACTCATACAATTTCTTTTCGCACTTTCAGAAACCAACTCTA CCAAAAGGTGTAGCAGCTGCTTCAAATAGTCTCCCGAAAGGTTTAGGGTG AGAGATAACTTCTAATTTATCAGTCTAGCATGCTCGACTACTAATTCATA CATGTAAAAGATAAGCAAAACATAATGGAAGGAACAAATTTTACTGtata caaactgatattataTTATCCCATAACATAATTCATGTTATCATATAGCA CCCATATTATacggattataaacgactcaAGTCTACTAACTTTTCATTgt gaataaaagttttgactGTCGCTGATCAATTGATTTTATGATTATATTGT ATTTAATTCAATTTAATTCTGTCTTTTGTAGctattcttttaaaattctt taaaggTACCTTTAAATTTTACCAAGGATTTTTACAAATACTCCTTTTCT CTTTTACAGTGCATTTCAGAAAGGTGGTGGCTTGTCCTCCATCGTTGGAA GtatgaaagagaaaaagaagacaAGCATCTTGGTTAGTTCGTGTTATTAA TCATTTCGTAATTATTTCAATTTCCCAAACCATCCAATAAGAAATATTTA TAAACACCCACCTCTTCCAAATTGAGTTTATTTTCCTTGGGgtttaagat tttttcagcaaaaattgtattttgcgaACAAACTTTCTTGGTAGACGCCT TAAGATAAGTCTTTTACCTCCCTTCTCTTCCCTTCTTGCAGGACCAATCA AAGAGCGATTGGAACAGTTTTAAGAATGATGAAGGACTGGAAGATGAACT GAAAGCGAATCGAAATGCTGGGTAAGTTTCCTATCAACCATTTGTTCACT ATTTTGACTAATCCGACCTTAAAAGCCACATCAAGTTTTACGATATAAAT TTCTAGCATCTGATATCTCTTAAAGACACGAAACTGAAAGTCCTTCGAAT GACCAATGCATCACAAAAAAGGGGAAATCAGTAAATCATTGTCTTTATCT ACCATTGACGCACTAAACAAATTgatctaattttttttgaaggtaTTTGG ACAAGCAAGAATTTCTTCAACGAGTTGATTACAAACAGTGGGAAAACGAA CGTGAAATGAGGCTGTATACAAACCACAAATAAAGTCATCGGTCCTCGTA ACATGGCTGTAAACAAACCGTAGATAAAGTCTTTCCTCGTAACATGGCTC AAAACAAACCGTAAATAAAGTCTTTCCTCGTAACATGGCTGTATTCAAAC TGTTAATAAAgccattttcgaaaaatggtggCACATTCCAATCTCTTCAG ATGCATTATTTAAAAGTGGTGTTGGTTGCCCATTCCATGAGAAGGGTTTG ATGTGTATTTGATGTCAAGCATAtgatttttactttgtttttaaattact TAGTAGGCGCTCTAATACCCTATGTCAAGGGAGTGTAGGAGGAAAATTAT CGAAatcatttttagcttttttaaaaaacgttttttttaggtttatcTTA AACTTTTTTGTATATATTATTACTAAAATGtagttttttttctcattatA GATCATTGAAAAATAACACGACTGTATATATTAGAGGAAAGAGCTTCTTC AGACTTTTACTTTCCACCTGTTTTATGAGAAGGGCTATTTTAATCTCTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064730TCONS_00064730Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064730-proteinTCONS_00064730-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_423supercontigscaffold_423:210117..214066 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DMP1PREDICTED: dentin matrix acidic phosphoprotein 1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
77.87 75.48 35.08 26.91 302.73 244.21 175.21 183.04 120.98 121.34 94.27 88.3 50.97 50.16 59.48 73.78 105.19 96.28 23.57 30.45 72.25 71.96 72.94 69.08 83.05 86.83 39.12 28.96 39.67 44.28