XLOC_040981 (gene) - C. hemisphaerica

Overview
NameXLOC_040981
Unique NameXLOC_040981
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_439:518916..524076+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040981 ID=XLOC_040981|Name=XLOC_040981|organism=Clytia hemisphaerica|type=gene|length=5161bp|location=Sequence derived from alignment at scaffold_439:518916..524076+ (Clytia hemisphaerica)
AATTAATACAAAAACACTTTAATATGaatgaaaaatatgatattactcaa ttaacaattattttcagtaaaagaaaagaacaaaattgATTTCATGACAA ACCTATagcaaaacgttttttttactGTGGCAAACAAAGTCTGCTttgct tttaaattttatgcgaTCCTTCAAAACCTTACAGAAAGAAGCGTAGAATC TTTCAGTGCAAGGCATCAAGTGGAAGTTCACAATGGTAATAAAGCTTTGT TATATTTCTTATCATATCTGGAGAATCCTAGTTGTTCACTGTTGATAACC TATGGAGACTTGATACCTGTTTATACTACCTGGTGCTTAGTGCCGTAGTT CATCGTGTTTGTTCTAAATTGTTTTGTACAGAGATGAGATTGAAACCTAG TACAGTGCTACAATCATAGGTTTCAGATTTTTGGTGAATTTCGAAATCGG CATATACTATGAGCTAACACAAGCAGTAATTATTGAACGAGAGTAATCAT TCAATGTGCGAGCAGAATGTCTTACCTTACGAGAAGTGTTAATTGTGATT caattttattcaatgattGATGTATTTGTTGATAGACCGCTTCCATTCCG TATATGATGTCTCATTTTCACCCACGATCAGtcatttttctatgaaatgG CAGAATTGATATGTACAGGACAATTTAGTAACACCTTGCATAACTCAAAA GCTCTTAGTGTTCCTGTTCCTGTTTGTTTTGGGTGAAAATTAGTCAGTTA CAGAGGGACAGGCAGCTTGCTTGAGATTTGGTTGAAGATAGTGTCTAAGG CCAGGTCTAATTGAtagtttggttcgtgtcctccgaccgactctaagttt ttgagaaagtgtttcactttgagtcagaaaaaccaaaataattttaccTC CTTCTCACATGATAACTACTATCTCTGCGGTTCTTTTTTAACTGACTGCT TTGATTCTTCTATAAACAACATCCACTTCCCGCACGGAAAATCTCCCGGT GTAACCcttacttaaaaacaaatatttagcACCTAAAAGCAGAGAGTCAC AGCTGTATTCCTTTAAGCACGCGTCGCGAACGCCTTCAACTCCAACTAGA AGTTATCTTGCGATCGCAGCGCATGCCTTTGCAGATTCAGGCTTTAGTTT ATTTCTTTACATTTGCGGTTGGATATCAGGATTGCACGATTGCTTAAGGA ATTTCTAAAATTGAGGattttggtgggaaaatgaaaaaaggttcCAGTTT TAGCTACCGACCAACcgacccatttttcaaagcttctaggacacaaacca aacaatcaattgggcctggcctaaCTGGATTTCAGTGAATCAGTTTATTA ATATGTCAGAATATGTACACATTTGGTTGTTGTACTTAGTATACTTACTT TTGGATACTTTTGGATGTGTTTGAGCGTACCGCTCTGGCAAGAATCTTTT GATCCACACCACAATCTTCATTCAATCCATAATTCCTGAAGGAAGAANNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATAATTCC TGAAGGAAGAAATGGATCAGCAGAGAgatttcatgtctaaaattgAGTTT GAGTCAACTCTCCTGCACCCTGTATAACCACGGATTTGGGGCTCATCGGG AATTTTTTGTACTAAGTGTTTGTCAAGTgcatttttgaatttgtcaacag tttaatttttcaagtttctaATGCTCTTTGGCATTGCATTGAAAAGTTTT GCTCCTTGTATAGTCATGGTACTGTCGCGTAATTTTGAATTGTTTGGACC GGCGTATTTGCTAAAACACATTCGTCCTAATCTTGGATGGTCTTTAGATT TGAAGCAATCATTGATATTTGGCANNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAAGTACA CTTCCTTGTGGTACACCTGAGATAACTTCTTGGTTGTTTGATTTCACACC ATTAACCACTACAGTTTGTTGCCTGTCTCTCAAAAAGGACTCTATCCTAT TATAGATTCTACCAGTTATTCCTagccttttgaattttgacagaACAATT GAATGATCCACTTTATCGAAAGCTTTAGAAAAGTCTAAGTAAACAACATC TACATTGGTCTCTAAGTAAGGCCCTCAAGTGGTAACTTTGAGCACAATTT TGCACAGTTTTTTGTCTTTGATCATCAGCAAAAAATGGctaatcacgcat ccctttcCAAATCACAAAATCATGCTACAAAAAGTTCCTATCACATAATC ACACAAATTGCTTGGGGGGCCTCCTTAGTCAGTGGATCAAAGAAACTTGA CTGTCAGTAGTTTAATTGAAACCTGCTCTTCAATTTGTCTATTcccatta aaaatattttactagctggaatatattttttaaactgCAAAATGGTCTGC TGAAAAGGGACTCAGTTATTGTCTAGTTGCTACAGGTTGTTATCTTGGCG GTGGACAGATTATTTCACAGGTAGTGGAGATGAATTATTCAAACATATTT CTGTGatagaaatattatttttcatgcTACAGGCTTTGCTGAATCTTAAC TGGTAAAGTATTTCAATCGGAGTCACCTATATCAGTATTGTCATATCCTA TATCATCATTAGAAACATTAGtcttttctaatatttttctaGTATAGAGA AATGACTATGTTTGTTATCTAGTATCATTCTAATAAGGAAATGTGTGAAG GTTGGGATTAATGGAAGGCATGACAGATATGTTCTCTCCAACAAAAATAG TATATAATAGCTAAGTTGTATTTCAAActtgattttgaagattttgagcc TTATGTACTGGAGATCAGTTAAAGCAACACTCGAAACACAATTTGTTAAT CTATATTTAGAAACTCGCACTTATTTGATTGATACTGTCTGGGTATAATT CAATGGTTTTACATTAAATTAAATAAGCTTTAAAAATCAACATGTAGTTT CATTTATGTAtccttttttcacttttcagccGCCAAAATCCAAGAAGGTC AAGGTTAAGAAGCCTCAAGCTGCCCCTTTCACCACCAAGGGTGCAAAAAC CACCAAGAAAACTTCCAATGTTTTAATTGAAAAACGTCCAAGAAACTTTG GAATCGGTATGCAACTGTTTGTACTCATTGTTTActtattcaaaaattta tttcaggTATCTAATACAGAGCCTATTTATGATGATCAAGTTATGCTTac agaaaaacaaacattgaccTTAAAGATAATGTTTGGCGATAAAAGGAAGG GTAACAGCAAAAGGGTGGCACCTTCCTGTGATTGAGATATGTAAAAGCTA CTTATTTACTCAAgcgaaatgaaagaaaagttGTCAAGAGATGTGACCTc acattctattgcttttgtGCGATCTCAATAGCTTGTGTTCACATCGTTTT TAGTTCATTAGAAACTTTTTCTTCAGTCCTTAGTGATTTTTTGCAATTGA TTGATTTACACATTTTTAGGTGGTGACATCCAACCAAAGAGAGACTTGGG ACGTTTTGTCCTATGGCCAAAATACATTAAATTGCAGAGGCAGAAGCGTA TTTTGTACCAGCGTTTGAAGGTTCCACCAAGCATCAATCAATTTACTCAA ACTTTGGATCAGCAAACAGGTAAATCTTTGCTAAGTGATTATTTCAATGC TGTTTGCTGAAGGATTTAGCCATTTGTAAAGGCGTGTAGTGCTGAAACCT ATGGGAATCCTTGTATCTTATGAGAATGAGttattcaaaatattgatttt tgtgtTTCAGCAACAcaacttttcaaacttcttCACAAGTACAGACCAGA AACAAAAGCTGAGAAGAAAGCCAGATTAACAGCTCAGGCCGAAAGCAAAG CTGCTGGTAAACAAGAAACTGCTGGAAAGAAACCNACACCAGCTTTAATC TATTGATCGAAACCACAAGCACACCGCAAATTTACTATTTgcttgaataa aagaagaattttgtgAATGAGTTCTATGGGGAGGGGTACTAAGACaagta cgggtatgtgccgcccttaagggtgccttttttggacctTCGAAGGGCGG GtcgtaaaaatcacaaaatctaatttcagtcccccTAAGCAAGCCTTGTA AAACAGCCAAAAGTTCCAATAAGAGTCACGAAATCccgaaaaatcagttt tttcctCGATTTTTGCAGCACATACCCGttagctcgcaaccctagttaCC CCGGATAGTCTGTGAAATGATTGATTCAAGAATCGTTGgtgattcattca aaatttttacagcgAAGGGGGCCATGACTCTTGTCATGTCACTTACAGTA TTCCTTAATGGAATAGGGAGGaaatattaattttgaaatagctttatctC ATCACTTACCTACtgtatttttttagatttacaCAGCATTTATGCTGTAA GATTTTTGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065365TCONS_00065365Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065365-proteinTCONS_00065365-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:518916..524076 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
912.86 943.96 929.42 979 540.24 489.23 632.18 711.3 1642.99 1413.19 1711.09 2066.47 2119.24 2068.37 1988.13 1871.96 2097.27 2161.54 1013.08 1100.93 2027.64 1957.12 1400.01 1334.21 1004.1 1053.26 1704.88 1618.2 1126.92 1190.15