XLOC_042352 (gene) - C. hemisphaerica

Overview
NameXLOC_042352
Unique NameXLOC_042352
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_476:310868..316594+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042352 ID=XLOC_042352|Name=XLOC_042352|organism=Clytia hemisphaerica|type=gene|length=5727bp|location=Sequence derived from alignment at scaffold_476:310868..316594+ (Clytia hemisphaerica)
AGTAATGTAAGAAAAAGTTATGGAATTGAAAGAGATGCCAATAGATGatg gaaaattacaaaaattcaacAGTCAATGTTACACTTTCAAGGAACATCCA TTGATCATGCTGGAACCTTATCATCAGATCTTCCCTTCTACTTTGTATTT GAACCAACATAAATCGTTTCAAGAATCTGAAGTTTATGAAGATGATGTTT GGATTTGCACTTTCCCGAAATCAGGTATGATAACAATGCTGATGGATCCT TGATGGATTGACGgttataaaattcaaaatcaatttgcTGGAGAACAAAG TCTATTAAAACGAGACCAAACTCCTTGGCTTTTCACTTATGAATGGTCAA AATGTCCTGCTGAAAAGACATTCACAGTCATCAAGAGCTGAAGAGTTTTG GCAATcaaatttcatttgtttttgttttaactagTAACATTAGGACTAAC CATTTATCTTtcttttcacttgatttttttttaattctacaGGCACACAT TGGATGCAAGAAATTGTTTATTGTTTAAGAAATGGAATGGATTTTGAGAA AGCCAAATCATCTAGTCTCACCCTCAGAGTTccattttttgagtaattta taCTTTATCCTCATTTCTCTcgaactacacgttttttaataagcataGGG TAAATTTTTGCCAGCCTCGTTATGCTtagcaaaataaatttttgagcctc gaaTATGCTTATACTATGTTTATGTAATGGTGCAATaatatactttaatc ggattaattttcgcgagataaAATTTCgtgatttcgcgaattttcgcaaa attaaaactcgcgaaatcgtTTAAtcgctcattcgcgaaattaaatccac gcgtaATGTTTGGAATcactgattcgcgaaattaaatccaccttggtatt tttttatatttgcctATTTTTGGCTTATTTTAGTTTATTAACTTTATTTA GTTTATGAAGAAAAGTGTTTGAAAAATTCATGTCCAAATAGAActaaaaa tcgtcattttttctTAACAATCATCAATTCACGAAATTAGATCCATGCGA AATTTTTGGAATCGGCCATTTGCGAAATTAAACCTATGCGAAATTTTTCG AActgctcattcgcgaaattcaatccaaaaaatttcgcgaatttttgacc ACGCGAAATTTcatctcgcgaaatttaatctcgcgaaatttaatcccttt AAAGTACACATTATGcatgttttttgtaatttgggAGATCAAATGCTTCG AAATTTTGTAAACTAAGGCTCAGCACATATAGGCAATGCTTAAGTTTTTC CAAGATTTGAACCTGGACATGCTTATAAGCGTTCAAAAGAACGTCAAgaa ttttttaaaccttttaagtttttaagactaaaaatgttcttacaatgttc ttttTTCAGCATTTATTGTGTATTTTGGtgtaatttcctaagaaattgca tgttctAGAGTCTTTCATTGTTCTTAAAGTTTTGGCCTTGAAgccctatg ttcttatataccttgttcttatataaaagaaCATGTAGACTGTAGTCATG CTGTAAACCAAATTATTTTATTCATATAAAGCTTTTCATCAGTGACAATG GCCGATCAGACAGAACAAATTTACAAAGCTCTCGGTAAACCTTGCAAAGC AGGATCTGAATTAGTTGATCACACCCCTCGACCACGAACAATAAAAACTC ATCTCAGCTACGACATGTTACCTCCCAAGATTCATGAAACAGGTGCTAAG GTAATTCTGATAGAGGACCAGATaccctgtatcagtgacccaGTGAAACC TTTCACTCAGTATGGGAATGAAGATTTGCATCTAAATTCCTATGTCAATG AGAATGGAATCTATTGTTTTCAGATTAAAAAAGCCAGTGGGATGATTTTG GAATGCAATTTCTCCAATTCTATTTCTGATGGGGATGATATTGTTAGGAA ATTCCACAATTGAGTTGAGataattttgggtattttcccCACCGGGGATG ATTTTATCGCCAAATTTTTTAGTGGGTTAGGggtcccactgggtctgtga gagaCAACAAAATTGCAGATTTTCTGAATTTGCAAAGTTaggaaaaatct ggaaaatattttttttggacatattttaaaGTGTAAAACTAGCCCATTTT GTTTCTGTCCTTTTCTCTGGAACTGGCGAGCtggtttttcatgattttta caATGATGCATAATGTTGACATTCAAAATTAGAGAGAGCCGAATTAGTAA CTTAAAAACATTGTCTAATTCAAGGATAAATTCTCCATATAAATTCAGGA AAGTTGAACTATAAATTCTTGTAAGAAAGTCTGTTTGCAGTCTCGTGGGT AATTTTTCAACTGTTTTTAGATGATTTGTGTGGTACGAAACCCCCGAGAT GTTTGTGTATCTCTTCTAAATCACTTTTACTTGACTGAAAATTTCACTGG AGATGTGGAATTGATTGCTGACATCATGCTCAAAGACATCGGACCTTTTT ACGCTCCTTTCTTCACTCACATTTTGAGTTATTGGAAGCAATGTGAAAAT CCTAATCTACTTATTGTACATTATGAAGAAATGCAAAAAGATATTGCTGG TATttcttgttttttcattcacttGTTAAGTCATATATTTCAATATGcaa tctttttataagaataagctTTTGTTGAGGCTTggtatgttcttattttt ttggtaattttagccccaAATTGTTCCTATCATGGGCTCTTATTTTTAGT GCAAAGATTGGGCTATCAATTCAATTCTAAATTTGATTCTTAAATTCTTC TGTgtatattgttcttataaagttcttcaaatagaaaaaagagtgcaGTC AATTAATCAAGTTATCTTTATTTGTAGTAATCCTCAATTCATACTGTAGA TTGCACCAGTTTCTTGCACCAACAAAAAAGCatttacttttatttctttA AGGTATTATTAAGCGAGTGGCAAAGTTCATTAATGCAAAGGAATATTCGG ATGATCAAATAGAAAAGCTCATTGAGCACACATCTCTTGATAACATGAAA GTCAACACATCAGTTAACGGAACTGGTACTGTTGATGTAAGTATTATCCA CAACTACTGCGCTAGACTATGACAAAATATTGACGGTTGATATCATGTTC ATGTTGATATATTACGATTTTCTGtcaatataccgggtgcgccaaaaata agtatacaggtttgtcgagatattgtgagctttaggatttaaaatttttc ttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtttgataaccta acgaggagtgttttctatgagttcttaatccacctattctaatccgttga ttAGACATAAAAATACCACAAAATACAACTGTGTCCATCAAAACTCATTA GGAAAttcaaaaatatggaaaaacaagctattcccatgtgagataatatt tttggaaaagctgaaaaaagctttagaaaTCTTCAAGAGATGTTTCAATA TTATGTGTGTGCTGTGTGAGAAAACTTTTGGAAAAACAGATCACTATGCC TCGATTAACAGTTGCTATTAAAAGAACTCAAGCTCAAAAACTTGGGTCTA CATTGAGTTTGCTCATGTTGGAAATGCTCATGAGGTGAAAAGGAGATGGA GAAACCGTTGGCAAACTATTAAACCTCTTACCATTAGAAGAAATTGTGCT TTTATCATTCATTTTGTCTTCTTAATAGCGTGATTGTTAAAAGACATTTT CTCgctgtttttgctgattttttgaaatttcgacattagaAAAAGTCAGC TTTTTTTAGATAACTtttgaactactttttcaaattcaatgtaCGATAGC CCAAAACCCAAGTTAGAGCttcctctatacgataaaaatTGACAAACAAT TTAAATTCTAAAGCTCACAATACCTCGATGAACCTGTATACTTATTTTTG GCGCACCCGGTTTAGCGGCAAATTAAGACTCTGGGAGATTAGAACTTCAA AGTCCTGATTTCCCAGGATATTATGACTTCACGAGTCGTAATCTCCCGGT AAATTTAGATCGAAGTAGTAAAATAAGACTCGAAATAAAAAGCGTTTTTA AAGGTAGAAGAGTCCTATTTTCCCGGTGGAAAATGACTTCGCTAACTAAA AGGGAATTCCtacattttcgaatgttttgtttgttAGTAAATTCAAGGGT GATGGGGAGATGAACTTGCTTATTCATACAAATATACCGTTGTGTTATAA AAGATATGAATAAAAAATCATTCTTTAATCTTCTTCATTTCACATGAATT TACCAATATTATTCTAGAAATTTTGACTCACATGACAAAATTTATAcatt attggaactaattttgagGGAAAGAgattttagaaagaaaaaaaaattaa accaaatatagCTTACTTAttgggtcaaatttttgctgGAAATAATTATT GaggtcaaaaaataaaatcgaaaaaaaaattcattttgcgGAAACTATTG GTTTTGGATATTTTCGAACGAATTCCATTCATTTTTTTAGTGGTATAACT TCTATGGAATTTGCACCATGTCAATGAGATAAGAATTAATCGAGCTACTA AATCCATTCTTTCTATCCACTGTAGGGACAAAACGCCTCTATTCAAGCCT TTTTCGTGAAATATCTCTTTGAAGAAAATagaattaaaacatttttatag aGTCCTAATTTCCCTCCCCAATCCTAATTTCCCGGGCATTTAGGACCCAA AAGGTCTTTATTTCCCGGGAAATCAGGACTTTAAGGTCTTAATCTCCCGG GTCTTAATTTACGGTGACACCGGTATATTGTAAAAGTGCTCACAATTAAT TATATAGGGCTCACAATATATTGTACATAGAGGGGTCCACAATTAATTGC TAACTACTTTTGGTATTGGACGGAAATATCCCGGTACTTGTCGGAAGATT TTGACCGATATTAAAGTAATCTTTGGCCGATACACCGTACCCTCAGAGCC CCCCACTTCTATTATAGGGTAGTTAAAGCACAAAAATGCAATTAAATTAT CTCTTTTTTCAGACTGTGATTAAATTAATGCAAAATGAGCAAAAAGGAAG TCTCATCAACAAAGGGAAAACCGGAGGATGGAAAAATAAACTAAAGGAAG AAACAATTCAGAGGTTTCAAAAGTGGGAAGAAAAATGGCTCAAGGACACT GGATTGTCATTTGCTTACGAACTTTAACATAGGTCTTTTTTATACAAGTG TACATATATATTTTCGTTTCATGcttaaattttgtatttttttttttgga atctaaggGTGTATAATAAGAGTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067818TCONS_00067818Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067818-proteinTCONS_00067818-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_476supercontigscaffold_476:310868..316594 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SULT1A4sulfotransferase 1A4 Homo Sapiens
SULT1E1estrogen sulfotransferase Homo Sapiens
SULT1C4sulfotransferase 1C4 Homo Sapiens
SULT1A1sulfotransferase 1A1 isoform a Homo Sapiens
SULT1A3sulfotransferase 1A3 Homo Sapiens
SULT1A2sulfotransferase 1A2 Homo Sapiens
SULT2A1bile salt sulfotransferase Homo Sapiens
SULT1B1PREDICTED: sulfotransferase family cytosolic 1B member 1 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
100.84 93.96 72.08 70.44 26.21 20.04 15.75 13.01 5.23 7.49 8.45 3.61 4.61 5.7 0.95 0.71 16.87 29.44 0.56 0.74 46.28 43.9 60.12 58.73 3.49 1.71 5.02 4.59 24.83 34.06