XLOC_042846 (gene) - C. hemisphaerica

Overview
NameXLOC_042846
Unique NameXLOC_042846
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_487:107..3691+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042846 ID=XLOC_042846|Name=XLOC_042846|organism=Clytia hemisphaerica|type=gene|length=3585bp|location=Sequence derived from alignment at scaffold_487:107..3691+ (Clytia hemisphaerica)
GTTACTATCTTTGAAGTTAATCTCAATGGTTATCCCATTAGAATGAACAA TTTTAGTAATACAAAAAAGAACTCAAATCGTTCATCATATTTTAAAAAGT TCCAATTTCATCTCGCATTTCTCATCCCCATACTATTTGAAGACTTTTGA AATCagcctcttttttctttttcacatcCAGGGAAGCAGCGGAGCTTCGT TCAGCGCTAAAGGAAAAAGATCGTTCAACTTTGCTAAGCTCCGACCATTC AAAGGACAACAGAATAACAAAGGAGAGGGTGAAGGGGACCCATCGGCCAG CGACGGGGACCAACTACAAAAGACGGAAGATATGATTCTGTCATACGAAT CAGTTTGCCAAGAAGAGTTGAAATACACACGACCTGTCATTATTTTGGGA CCACTCAAAGACAGACTGAATGATGATCTAATTCAAGAATTCCCTAATGA GTTTGGCAGTTGTGTTCCCCGTAAGTCATTCATTTTATGTCAAGATAGTG CTGACGTAAACTTCATTCCCGGTTTTAAAGACTAtattttacataagtgt tcccgtttcatatcaaacacatatttcatatcagggcagtgtctgcctat tgttatattatgcttatataagcaaaaaaatgtttttctttccctctttc tgaccaatcttgctccgcattcgtgtcaattcaatgtgaaaaagcttgtg aattaaaattaatgagtaagcaaacgattaTTACATAACAGCTTTTTTTA TATTATCTGTAAAAGATCTCCTCCTAAAATGCACATGGTCTTCGTGATGA ATCATGAAGTCTCAGGGTTAGTTATATATAAATTCGTGTTagttaaatga aaaaaacaaacttttaagaTTGTTGGGACCAGCTGCATACCTTACTTGCA ATAGTTCTGATTAAAAAGAATCGTTTCGTCTGTAAAATAGCTTtcttttt tgtaagcaaaacTTCTTTCTAACTGTTTACCTTATCTTTTTGACAGACAC GACACGTGAACCACGTGAACACGAAGTTTCAGGACGTGATTATCATTTCG TTGATTCGCGTGAGAAAATGGAACAAGACATTGCTAACCACTTGTTCATC GAAGCCGGTCAATACAACGAGAACCTGTATGGTACAAGCGTTAGCTCCGT ACGAGAAGTCTCTGAGAAAGTAAGTAGTAACAAGCTTTTGTCCTTCTCAA AGTTTTGTGTCgtcatattcatgatatgcaccattgtaatgtcttccacg gacccaacagctgattggttgaaagtgacgtAAAATCATTCAATACGTCA CTTTCAACCAATCAGCTGTTGGGTCCGTGGAAGACATTGCAATGGTGCAC ATCATGAATATAAAGTTGTGAGAGGTTATCTCCCACGCAGATCTAGATGC CCAAGCTTCATCATAATTTCTATGCTAGAAAGTGTCTGAAGAAGCTTATA ATTGTTTTGTTCGCCACTAAACTAACTCATTGAAAAATCTAATGGTCCGC AAGATTATGAGCTTCATTTTCTATTTTCTGTATCAATAAAGACATACACA ACTCTTTCAGGGCAAACACTGTATATTGGATGTTAGTGGGTACGCCATCA AGCGTCTACAAGTGGCACAATTATATCCTATCGCTGTTTTCATCAAACCA ATCTCCGTCGAATGGATGCAAGAGATGAACAAACGTCTTTTACTTGAACC CGCTCAAAAGAATTTCGAACGCGCACAAAAATTAGAACAAGAATTTATCG AATACTTCACTGGTACGAACTTCATTTTTAGCTACAATATTTTCTCGTCT CTGTTGAGAGTAGTATAAGGGGTGTTACTCATTAAACAGGGGTTCGTTAC CGTTTCTTATTCAAGTTCCTTTAACAGGCTCATTGATTGCTTACTCGTTT GACCGTTTTGAAAAGTTGATATTCCTGAAAGAAATTACTATTACTATACA TTTTCAAAGTTCCTCGGTATTCTCCTCTCCTCGAAATACGAAAAGAGGAT TTTCCCGTAAACTTAGATCTGACGGCAGAGAGATGATGATGGTAATTTTC TTTTAATTAACAGGTGTTATTACTGGCGAGTCTTATGAAGAAATCTATTC TCACGTCAAAGAATTGATCGCACAACAAAGCAAACCCGTCGTTTGGATAC CAAGCAAAGAGAAATTATAAACCAATGTGAGACACATGGTAAGAAAACAT ATCCCGTATAGTAGTGTGGAGTATTGGACGAACATACTGGAATAAATGGA CGTGGACGTCGGTAGCATAGCTTGAGATACGCTAGCTTCTTTTTTTATCA TGGCGACGGTGGTTTGGAAGCTACAGTGAAGTTCACATATAAGGGCTGCC GACAAATTATAAATGGAATAGAAGGAAAATGGATGTTGCTATTTGTTGGT TTTAGGTGGATGGGTACTGGTCTTGATGTTCTTATTACGAACGTTTCAAC AAGAGTAACGCCACTGAGAAGGAGGCCTTTTCGCCTTATTCGGAGTGTCG TATCTGGTTTAATGAGCACTCCCCTGAGGAAGTGTTTCTGTTACAAAAGC GTCTGTTACGACACTTGTTACATACTGACGCTTACTCCCGACGAATACGA AAAACAAAATTGGCTGCGTTGATGTTCATAATAAAATGAAACGTAAAAAG GACACTAAGGTTGTACTGAAACACAAGAACTACTGCAGTCCTTATTTCGC ATCAAACCAAACAATTTTTTTTTTCGTTTTCGTTGGAAGTGAAATTCAAG TAGCTGAAAGGTGAAACATGATGGAAAATTCATTAAAAAATACGTTGTTT TATCCGTCATCGAATACCGATATTTAATTTGTCCATAAATTGTATACTAG AAGTGCTTTTACTTAATTAAATAATTCCCCATTGTTTTTTATACTTGCTT TTAATAAATTTAGTAATTATATTATTATTATTGTCTTGTTAGATTTATTT TCCCAAATTATTTTGCCTCATTTATTTCTTTCAATCCAGCTTGTACTCAG TTTGATTATATTGTAATAGTGGTTTAATGCACTAAAATGGCTATCTTGAT ACAAACAAAGTTATAACATTAGTCCCTCTGACAGTGGATTTTTTTTTTCT CTATGTAATTCGTACAAATTAGATTTTCAAGTAGAGATCTCCAAGTGTAC TCGAAGTAATTTCTCTGCACCGATTTATATTTTAGGCAATTTTAAATTCT AGGAATTTATCTTATTGATGTCTTTCTATCTAGAAGTATacagtttttaa aaaagttttaacttgtttttagaattttcttttcttttgaccatAATTAT GATTATGAAAATTTAGTCTTTGTAACGGTGTTGTTTTCTTGGCAAATTTC TCCCAATATTCTATCTTTATGCGCTTGTAAAGCGACATTTaagttggaaa gatatttcaaagTGATCTTTTCGTAGCTCATCATGCGACAAATGAATATG AATAATATGTATTTTGTGTAGAATTTATATAAactattctttcttttttt tcattttttgtttgtcaTCATGTACATATATATTCTAAAGCAAGTTAATG TCAGCGGGCaagaaacattttattttgtgtaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068674TCONS_00068674Clytia hemisphaericatranscript
TCONS_00068675TCONS_00068675Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068675-proteinTCONS_00068675-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_487supercontigscaffold_487:107..3691 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GUK1PREDICTED: guanylate kinase isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.47 7.32 6.12 5.76 213.85 160.21 93.65 98.87 47.91 57.54 29.25 31.91 34.1 28.97 23.91 27.28 54.07 55.1 31.39 43.51 50.83 52.58 39.42 46.03 47.55 50.57 131.55 135.04 43.88 52.13